>ref|XM_468091.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2653

 Score =  135 bits (68), Expect = 1e-28
 Identities = 137/160 (85%)
 Strand = Plus / Minus

                                                                        
Query: 166  cggccatgtcacggcgatggggctcgtgacattgtgcacgccgtcgctccacgtgacgga 225
            |||||||||||||||||||||||| ||||| | |||||||||||||||||| ||||| ||
Sbjct: 2392 cggccatgtcacggcgatggggctagtgacgtcgtgcacgccgtcgctccaggtgaccga 2333

                                                                        
Query: 226  cccgaacgagtacttgccgtcgacgatcaccgggttgccggccacggcgagggtgatctc 285
            |||||| | ||||| |  |||||||||||||||||| || | | |||||| |||||| ||
Sbjct: 2332 cccgaaggtgtactcggtgtcgacgatcaccgggttacccgacgcggcgatggtgatgtc 2273

                                                    
Query: 286  gtacgccaggctccggtgctcctcgtcgaacacgagcttg 325
            ||| | ||||||| ||||   |||||||||||| ||||||
Sbjct: 2272 gtaggacaggctctggtggctctcgtcgaacaccagcttg 2233

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  135 bits (68), Expect = 1e-28
 Identities = 137/160 (85%)
 Strand = Plus / Plus

                                                                            
Query: 166      cggccatgtcacggcgatggggctcgtgacattgtgcacgccgtcgctccacgtgacgga 225
                |||||||||||||||||||||||| ||||| | |||||||||||||||||| ||||| ||
Sbjct: 33003948 cggccatgtcacggcgatggggctagtgacgtcgtgcacgccgtcgctccaggtgaccga 33004007

                                                                            
Query: 226      cccgaacgagtacttgccgtcgacgatcaccgggttgccggccacggcgagggtgatctc 285
                |||||| | ||||| |  |||||||||||||||||| || | | |||||| |||||| ||
Sbjct: 33004008 cccgaaggtgtactcggtgtcgacgatcaccgggttacccgacgcggcgatggtgatgtc 33004067

                                                        
Query: 286      gtacgccaggctccggtgctcctcgtcgaacacgagcttg 325
                ||| | ||||||| ||||   |||||||||||| ||||||
Sbjct: 33004068 gtaggacaggctctggtggctctcgtcgaacaccagcttg 33004107



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 166      cggccatgtcacggcgatggggctcgtgacattgtgcacgccgtcgctcca 216
                |||||| || ||||||||||||||| | || |||||| |||||||||||||
Sbjct: 33002080 cggccaggtgacggcgatggggctcctcaccttgtgcgcgccgtcgctcca 33002030

>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1293_A01
          Length = 139121

 Score =  135 bits (68), Expect = 1e-28
 Identities = 137/160 (85%)
 Strand = Plus / Plus

                                                                         
Query: 166   cggccatgtcacggcgatggggctcgtgacattgtgcacgccgtcgctccacgtgacgga 225
             |||||||||||||||||||||||| ||||| | |||||||||||||||||| ||||| ||
Sbjct: 49888 cggccatgtcacggcgatggggctagtgacgtcgtgcacgccgtcgctccaggtgaccga 49947

                                                                         
Query: 226   cccgaacgagtacttgccgtcgacgatcaccgggttgccggccacggcgagggtgatctc 285
             |||||| | ||||| |  |||||||||||||||||| || | | |||||| |||||| ||
Sbjct: 49948 cccgaaggtgtactcggtgtcgacgatcaccgggttacccgacgcggcgatggtgatgtc 50007

                                                     
Query: 286   gtacgccaggctccggtgctcctcgtcgaacacgagcttg 325
             ||| | ||||||| ||||   |||||||||||| ||||||
Sbjct: 50008 gtaggacaggctctggtggctctcgtcgaacaccagcttg 50047



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 166   cggccatgtcacggcgatggggctcgtgacattgtgcacgccgtcgctcca 216
             |||||| || ||||||||||||||| | || |||||| |||||||||||||
Sbjct: 48020 cggccaggtgacggcgatggggctcctcaccttgtgcgcgccgtcgctcca 47970

>dbj|AK121728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082C22, full
            insert sequence
          Length = 2653

 Score =  135 bits (68), Expect = 1e-28
 Identities = 137/160 (85%)
 Strand = Plus / Minus

                                                                        
Query: 166  cggccatgtcacggcgatggggctcgtgacattgtgcacgccgtcgctccacgtgacgga 225
            |||||||||||||||||||||||| ||||| | |||||||||||||||||| ||||| ||
Sbjct: 2392 cggccatgtcacggcgatggggctagtgacgtcgtgcacgccgtcgctccaggtgaccga 2333

                                                                        
Query: 226  cccgaacgagtacttgccgtcgacgatcaccgggttgccggccacggcgagggtgatctc 285
            |||||| | ||||| |  |||||||||||||||||| || | | |||||| |||||| ||
Sbjct: 2332 cccgaaggtgtactcggtgtcgacgatcaccgggttacccgacgcggcgatggtgatgtc 2273

                                                    
Query: 286  gtacgccaggctccggtgctcctcgtcgaacacgagcttg 325
            ||| | ||||||| ||||   |||||||||||| ||||||
Sbjct: 2272 gtaggacaggctctggtggctctcgtcgaacaccagcttg 2233

>dbj|AK106527.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F01, full
            insert sequence
          Length = 2648

 Score =  135 bits (68), Expect = 1e-28
 Identities = 137/160 (85%)
 Strand = Plus / Minus

                                                                        
Query: 166  cggccatgtcacggcgatggggctcgtgacattgtgcacgccgtcgctccacgtgacgga 225
            |||||||||||||||||||||||| ||||| | |||||||||||||||||| ||||| ||
Sbjct: 2295 cggccatgtcacggcgatggggctagtgacgtcgtgcacgccgtcgctccaggtgaccga 2236

                                                                        
Query: 226  cccgaacgagtacttgccgtcgacgatcaccgggttgccggccacggcgagggtgatctc 285
            |||||| | ||||| |  |||||||||||||||||| || | | |||||| |||||| ||
Sbjct: 2235 cccgaaggtgtactcggtgtcgacgatcaccgggttacccgacgcggcgatggtgatgtc 2176

                                                    
Query: 286  gtacgccaggctccggtgctcctcgtcgaacacgagcttg 325
            ||| | ||||||| ||||   |||||||||||| ||||||
Sbjct: 2175 gtaggacaggctctggtggctctcgtcgaacaccagcttg 2136

>gb|AY105082.1| Zea mays PCO152725 mRNA sequence
          Length = 857

 Score =  117 bits (59), Expect = 3e-23
 Identities = 155/187 (82%)
 Strand = Plus / Minus

                                                                       
Query: 166 cggccatgtcacggcgatggggctcgtgacattgtgcacgccgtcgctccacgtgacgga 225
           |||||| |||||||| |||||||||||||| | |||| ||||||||||||| |||| |||
Sbjct: 471 cggccaggtcacggcaatggggctcgtgacgtcgtgcgcgccgtcgctccaggtgatgga 412

                                                                       
Query: 226 cccgaacgagtacttgccgtcgacgatcaccgggttgccggccacggcgagggtgatctc 285
            |||||||||||  ||   || ||||||||||||||||| | ||| |||| |||||| ||
Sbjct: 411 tccgaacgagtagctggaatccacgatcaccgggttgcctgacactgcgatggtgatttc 352

                                                                       
Query: 286 gtacgccaggctccggtgctcctcgtcgaacacgagcttggccggcgtcaccttggcgtc 345
           |||  |||||||| | |||| | |||||||| ||||||||  ||| |||||| || | ||
Sbjct: 351 gtatcccaggctctgctgcttcccgtcgaacgcgagcttgctcggggtcaccgtgacatc 292

                  
Query: 346 cacgccg 352
           |||||||
Sbjct: 291 cacgccg 285

>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 253     caccgggttgccggccacggcg 274
               ||||||||||||||||||||||
Sbjct: 1426809 caccgggttgccggccacggcg 1426830

>gb|AC015771.7| Homo sapiens, clone RP11-2F20, complete sequence
          Length = 161034

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 42     gaagataaattattccagagttaat 66
              ||||||||||||||||||| |||||
Sbjct: 136248 gaagataaattattccagatttaat 136224

>ref|XM_473575.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2331

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 185  gggctcgtgacattgtgcacgccgtcgctcca 216
            |||||| ||||| |||| ||||||||||||||
Sbjct: 2300 gggctcctgacaatgtggacgccgtcgctcca 2269

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 336      ccttggcgtccacgccggcg 355
                ||||||||||||||||||||
Sbjct: 10650470 ccttggcgtccacgccggcg 10650451

>gb|AC099948.9| Mus musculus chromosome 10, clone RP23-19D21, complete sequence
          Length = 203086

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    aagaagataaattattccag 59
             ||||||||||||||||||||
Sbjct: 87938 aagaagataaattattccag 87957

>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032G21, from chromosome 3, complete sequence
          Length = 187621

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   ccttggcgtccacgccggcg 355
             ||||||||||||||||||||
Sbjct: 67384 ccttggcgtccacgccggcg 67365

>ref|NM_135157.2| Drosophila melanogaster CG13989-RA (CG13989), mRNA
          Length = 584

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 319 gagcttggccggcgtcaccttggcgtcc 346
           |||||||||||||| ||| |||||||||
Sbjct: 283 gagcttggccggcggcacattggcgtcc 256

>gb|AY070781.1| Drosophila melanogaster AT09383 full length cDNA
          Length = 563

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 319 gagcttggccggcgtcaccttggcgtcc 346
           |||||||||||||| ||| |||||||||
Sbjct: 259 gagcttggccggcggcacattggcgtcc 232

>gb|AC009351.7| Drosophila melanogaster, chromosome 2L, region 26A-26A, BAC clone
             BACR23K01, complete sequence
          Length = 173723

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 319   gagcttggccggcgtcaccttggcgtcc 346
             |||||||||||||| ||| |||||||||
Sbjct: 31291 gagcttggccggcggcacattggcgtcc 31264

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 185      gggctcgtgacattgtgcacgccgtcgctcca 216
                |||||| ||||| |||| ||||||||||||||
Sbjct: 28852283 gggctcctgacaatgtggacgccgtcgctcca 28852314

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 336      ccttggcgtccacgccggcg 355
                ||||||||||||||||||||
Sbjct: 10648571 ccttggcgtccacgccggcg 10648552

>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 334     caccttggcgtccacgccgg 353
               ||||||||||||||||||||
Sbjct: 1390316 caccttggcgtccacgccgg 1390297



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 334     caccttggcgtccacgccgg 353
               ||||||||||||||||||||
Sbjct: 1359774 caccttggcgtccacgccgg 1359755

>dbj|AK110251.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-H04, full
           insert sequence
          Length = 3493

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 185 gggctcgtgacattgtgcacgccgtcgctcca 216
           |||||| ||||| |||| ||||||||||||||
Sbjct: 926 gggctcctgacaatgtggacgccgtcgctcca 957

>dbj|AK110034.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-B01, full
           insert sequence
          Length = 3486

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 185 gggctcgtgacattgtgcacgccgtcgctcca 216
           |||||| ||||| |||| ||||||||||||||
Sbjct: 183 gggctcctgacaatgtggacgccgtcgctcca 214

>dbj|AK061293.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B04, full
           insert sequence
          Length = 1150

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 336 ccttggcgtccacgccggcg 355
           ||||||||||||||||||||
Sbjct: 689 ccttggcgtccacgccggcg 670

>gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21 of 83 of the complete
              sequence
          Length = 260673

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 319    gagcttggccggcgtcaccttggcgtcc 346
              |||||||||||||| ||| |||||||||
Sbjct: 204388 gagcttggccggcggcacattggcgtcc 204361

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 245    tcgacgatcaccgggttgccggcc 268
              ||||||||||||||| ||||||||
Sbjct: 369335 tcgacgatcaccggggtgccggcc 369312

>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04,
             complete sequence
          Length = 154865

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 185   gggctcgtgacattgtgcacgccgtcgctcca 216
             |||||| ||||| |||| ||||||||||||||
Sbjct: 64345 gggctcctgacaatgtggacgccgtcgctcca 64376

>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 334     caccttggcgtccacgccgg 353
               ||||||||||||||||||||
Sbjct: 1036211 caccttggcgtccacgccgg 1036192

>gb|AC004639.1|AC004639 Drosophila melanogaster DNA sequence (P1 DS06863 (D124)), complete
            sequence
          Length = 78419

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 319  gagcttggccggcgtcaccttggcgtcc 346
            |||||||||||||| ||| |||||||||
Sbjct: 8053 gagcttggccggcggcacattggcgtcc 8080


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,246,198
Number of Sequences: 3902068
Number of extensions: 2246198
Number of successful extensions: 37642
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37264
Number of HSP's gapped (non-prelim): 377
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)