ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast38a06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 202 6e-49
2dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic D... 202 6e-49
3ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA 198 9e-48
4ref|NM_197613.1| Oryza sativa (japonica cultivar-group) putative... 92 1e-15
5gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 gen... 92 1e-15
6dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 92 1e-15
8ref|NM_187656.1| Oryza sativa (japonica cultivar-group), predic... 70 5e-09
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 70 5e-09
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
11dbj|AK119538.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 5e-09
12dbj|AK104060.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 5e-09
13dbj|AK061126.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 5e-09
14gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome... 70 5e-09
15ref|NM_197892.1| Oryza sativa (japonica cultivar-group) putative... 46 0.077
16gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 geno... 46 0.077
17gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 gen... 46 0.077
18dbj|AK068365.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.077
19dbj|AK058540.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.077
20emb|BX295537.1| Platypus DNA sequence from clone XX-200B24, comp... 44 0.30
21gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 42 1.2
22dbj|AK060094.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
23gb|AE010415.1| Methanopyrus kandleri AV19 section 114 of 157 of ... 40 4.7
24gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 4.7
25gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, compl... 40 4.7
26emb|AJ131245.1|HSA131245 Homo sapiens mRNA for Sec24 protein (Se... 40 4.7
27gb|AY643478.1| Edwardsiella tarda strain PPD130/91 putative type... 40 4.7
28ref|NM_006323.1| Homo sapiens SEC24 related gene family, member ... 40 4.7
29gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 4.7
30gb|AC138782.4| Homo sapiens BAC clone RP11-264J9 from 4, complet... 40 4.7
31emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 4.7
32gb|BC040137.1| Homo sapiens cDNA clone IMAGE:5492331, containing... 40 4.7 
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  202 bits (102), Expect = 6e-49
 Identities = 221/258 (85%), Gaps = 2/258 (0%)
 Strand = Plus / Minus

                                                                            
Query: 94       gctcagcactcgggcgtgagcgagcggtcccgccggaagtcctggcagtagtagtagacc 153
                |||||||| ||||||||||| ||| |||| || ||| ||||||||||||||||||| |||
Sbjct: 17438903 gctcagcattcgggcgtgagggagtggtcgcggcggtagtcctggcagtagtagtacacc 17438844

                                                                            
Query: 154      atgtggcgctgctgcgcccaccgcatcgccgcgtactgctgccgcgtgagccccgtgccg 213
                ||||||| |||||| ||||||||||| || ||||||||  || ||||||| || | ||||
Sbjct: 17438843 atgtggctctgctgggcccaccgcatggcggcgtactggcgcggcgtgaggccggcgccg 17438784

                                                                            
Query: 214      acgggggacgcccggaccgggcggcacgagg-gcggggcgccgggcccgcacccggcgac 272
                 ||||||| ||| |||| ||||||||||||| | ||| || ||||  |||||||||||||
Sbjct: 17438783 gcgggggaggccgggacggggcggcacgaggcgggggccgacggg-gcgcacccggcgac 17438725

                                                                            
Query: 273      cacgaagcggtcgaagcgggtcacgaagggctggtagcggtagtcggcccggtgcctgcc 332
                   ||||||||||||||| |  ||||| |||||||||||||||||||| ||||| | |||
Sbjct: 17438724 ggtgaagcggtcgaagcgcgcgacgaacggctggtagcggtagtcggcgcggtggcggcc 17438665

                                  
Query: 333      gtcgtcggtggcccagtc 350
                ||||||||||||||||||
Sbjct: 17438664 gtcgtcggtggcccagtc 17438647
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>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0434A03
          Length = 146505

 Score =  202 bits (102), Expect = 6e-49
 Identities = 221/258 (85%), Gaps = 2/258 (0%)
 Strand = Plus / Minus

                                                                          
Query: 94     gctcagcactcgggcgtgagcgagcggtcccgccggaagtcctggcagtagtagtagacc 153
              |||||||| ||||||||||| ||| |||| || ||| ||||||||||||||||||| |||
Sbjct: 107127 gctcagcattcgggcgtgagggagtggtcgcggcggtagtcctggcagtagtagtacacc 107068

                                                                          
Query: 154    atgtggcgctgctgcgcccaccgcatcgccgcgtactgctgccgcgtgagccccgtgccg 213
              ||||||| |||||| ||||||||||| || ||||||||  || ||||||| || | ||||
Sbjct: 107067 atgtggctctgctgggcccaccgcatggcggcgtactggcgcggcgtgaggccggcgccg 107008

                                                                          
Query: 214    acgggggacgcccggaccgggcggcacgagg-gcggggcgccgggcccgcacccggcgac 272
               ||||||| ||| |||| ||||||||||||| | ||| || ||||  |||||||||||||
Sbjct: 107007 gcgggggaggccgggacggggcggcacgaggcgggggccgacggg-gcgcacccggcgac 106949

                                                                          
Query: 273    cacgaagcggtcgaagcgggtcacgaagggctggtagcggtagtcggcccggtgcctgcc 332
                 ||||||||||||||| |  ||||| |||||||||||||||||||| ||||| | |||
Sbjct: 106948 ggtgaagcggtcgaagcgcgcgacgaacggctggtagcggtagtcggcgcggtggcggcc 106889

                                
Query: 333    gtcgtcggtggcccagtc 350
              ||||||||||||||||||
Sbjct: 106888 gtcgtcggtggcccagtc 106871
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>ref|NM_187323.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 906

 Score =  198 bits (100), Expect = 9e-48
 Identities = 219/256 (85%), Gaps = 2/256 (0%)
 Strand = Plus / Minus

                                                                       
Query: 96  tcagcactcgggcgtgagcgagcggtcccgccggaagtcctggcagtagtagtagaccat 155
           |||||| ||||||||||| ||| |||| || ||| ||||||||||||||||||| |||||
Sbjct: 906 tcagcattcgggcgtgagggagtggtcgcggcggtagtcctggcagtagtagtacaccat 847

                                                                       
Query: 156 gtggcgctgctgcgcccaccgcatcgccgcgtactgctgccgcgtgagccccgtgccgac 215
           ||||| |||||| ||||||||||| || ||||||||  || ||||||| || | |||| |
Sbjct: 846 gtggctctgctgggcccaccgcatggcggcgtactggcgcggcgtgaggccggcgccggc 787

                                                                       
Query: 216 gggggacgcccggaccgggcggcacgagg-gcggggcgccgggcccgcacccggcgacca 274
           |||||| ||| |||| ||||||||||||| | ||| || ||||  |||||||||||||  
Sbjct: 786 gggggaggccgggacggggcggcacgaggcgggggccgacggg-gcgcacccggcgacgg 728

                                                                       
Query: 275 cgaagcggtcgaagcgggtcacgaagggctggtagcggtagtcggcccggtgcctgccgt 334
            ||||||||||||||| |  ||||| |||||||||||||||||||| ||||| | |||||
Sbjct: 727 tgaagcggtcgaagcgcgcgacgaacggctggtagcggtagtcggcgcggtggcggccgt 668

                           
Query: 335 cgtcggtggcccagtc 350
           ||||||||||||||||
Sbjct: 667 cgtcggtggcccagtc 652
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>ref|NM_197613.1| Oryza sativa (japonica cultivar-group) putative cellulase
           (OSJNBa0001O14.5), mRNA
          Length = 969

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                       
Query: 284 cgaagcgggtcacgaagggctggtagcggtagtcggcccggtgcctgccgtcgtcggtgg 343
           |||||||||  |||||||||||||||||||||||||| ||||  | |||| |||||||||
Sbjct: 775 cgaagcgggagacgaagggctggtagcggtagtcggcgcggtagcggccgccgtcggtgg 716

                         
Query: 344 cccagtcggaggcg 357
           ||||||||||||||
Sbjct: 715 cccagtcggaggcg 702



 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 133 tcctggcagtagtagtagaccatg 156
           ||||||||||||||||||||||||
Sbjct: 932 tcctggcagtagtagtagaccatg 909
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>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete
             sequence
          Length = 178022

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                         
Query: 284   cgaagcgggtcacgaagggctggtagcggtagtcggcccggtgcctgccgtcgtcggtgg 343
             |||||||||  |||||||||||||||||||||||||| ||||  | |||| |||||||||
Sbjct: 65029 cgaagcgggagacgaagggctggtagcggtagtcggcgcggtagcggccgccgtcggtgg 64970

                           
Query: 344   cccagtcggaggcg 357
             ||||||||||||||
Sbjct: 64969 cccagtcggaggcg 64956



 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 133   tcctggcagtagtagtagaccatg 156
             ||||||||||||||||||||||||
Sbjct: 65186 tcctggcagtagtagtagaccatg 65163
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                            
Query: 284      cgaagcgggtcacgaagggctggtagcggtagtcggcccggtgcctgccgtcgtcggtgg 343
                |||||||||  |||||||||||||||||||||||||| ||||  | |||| |||||||||
Sbjct: 20802630 cgaagcgggagacgaagggctggtagcggtagtcggcgcggtagcggccgccgtcggtgg 20802571

                              
Query: 344      cccagtcggaggcg 357
                ||||||||||||||
Sbjct: 20802570 cccagtcggaggcg 20802557



 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 133      tcctggcagtagtagtagaccatg 156
                ||||||||||||||||||||||||
Sbjct: 20802787 tcctggcagtagtagtagaccatg 20802764



 Score = 46.1 bits (23), Expect = 0.077
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 324      gtgcctgccgtcgtcggtggcccagtcggag 354
                |||||||||| |||||||||||||| |||||
Sbjct: 22488750 gtgcctgccgccgtcggtggcccaggcggag 22488780
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                            
Query: 284      cgaagcgggtcacgaagggctggtagcggtagtcggcccggtgcctgccgtcgtcggtgg 343
                |||||||||  |||||||||||||||||||||||||| ||||  | |||| |||||||||
Sbjct: 20813894 cgaagcgggagacgaagggctggtagcggtagtcggcgcggtagcggccgccgtcggtgg 20813835

                              
Query: 344      cccagtcggaggcg 357
                ||||||||||||||
Sbjct: 20813834 cccagtcggaggcg 20813821



 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 133      tcctggcagtagtagtagaccatg 156
                ||||||||||||||||||||||||
Sbjct: 20814051 tcctggcagtagtagtagaccatg 20814028



 Score = 46.1 bits (23), Expect = 0.077
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 324      gtgcctgccgtcgtcggtggcccagtcggag 354
                |||||||||| |||||||||||||| |||||
Sbjct: 22501218 gtgcctgccgccgtcggtggcccaggcggag 22501248
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>ref|NM_187656.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 783

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                       
Query: 295 acgaagggctggtagcggtagtcggcccggtgcctgccgtcgtcggtggcccagtcggag 354
           ||||||||||||||||||||||||| |  ||  | |||| ||||||||||||||||||||
Sbjct: 578 acgaagggctggtagcggtagtcggacttgtagcggccgccgtcggtggcccagtcggag 519

              
Query: 355 gcg 357
           |||
Sbjct: 518 gcg 516



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 131 agtcctggcagtagtagtagaccatgtggcgctgctgcgcccaccgcatcgccgcgtact 190
           ||||||||||||||||||||||||||   | |||||||||||||| ||| ||||| | ||
Sbjct: 748 agtcctggcagtagtagtagaccatggacctctgctgcgcccacctcatggccgccttct 689

                
Query: 191 gctgc 195
           |||||
Sbjct: 688 gctgc 684
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                          
Query: 295    acgaagggctggtagcggtagtcggcccggtgcctgccgtcgtcggtggcccagtcggag 354
              ||||||||||||||||||||||||| |  ||  | |||| ||||||||||||||||||||
Sbjct: 471545 acgaagggctggtagcggtagtcggacttgtagcggccgccgtcggtggcccagtcggag 471604

                 
Query: 355    gcg 357
              |||
Sbjct: 471605 gcg 471607



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                          
Query: 131    agtcctggcagtagtagtagaccatgtggcgctgctgcgcccaccgcatcgccgcgtact 190
              ||||||||||||||||||||||||||   | |||||||||||||| ||| ||||| | ||
Sbjct: 471375 agtcctggcagtagtagtagaccatggacctctgctgcgcccacctcatggccgccttct 471434

                   
Query: 191    gctgc 195
              |||||
Sbjct: 471435 gctgc 471439
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                          
Query: 295    acgaagggctggtagcggtagtcggcccggtgcctgccgtcgtcggtggcccagtcggag 354
              ||||||||||||||||||||||||| |  ||  | |||| ||||||||||||||||||||
Sbjct: 471543 acgaagggctggtagcggtagtcggacttgtagcggccgccgtcggtggcccagtcggag 471602

                 
Query: 355    gcg 357
              |||
Sbjct: 471603 gcg 471605



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                          
Query: 131    agtcctggcagtagtagtagaccatgtggcgctgctgcgcccaccgcatcgccgcgtact 190
              ||||||||||||||||||||||||||   | |||||||||||||| ||| ||||| | ||
Sbjct: 471373 agtcctggcagtagtagtagaccatggacctctgctgcgcccacctcatggccgccttct 471432

                   
Query: 191    gctgc 195
              |||||
Sbjct: 471433 gctgc 471437
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>dbj|AK119538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C03, full
           insert sequence
          Length = 1281

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                       
Query: 295 acgaagggctggtagcggtagtcggcccggtgcctgccgtcgtcggtggcccagtcggag 354
           ||||||||||||||||||||||||| |  ||  | |||| ||||||||||||||||||||
Sbjct: 898 acgaagggctggtagcggtagtcggacttgtagcggccgccgtcggtggcccagtcggag 839

              
Query: 355 gcg 357
           |||
Sbjct: 838 gcg 836



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                        
Query: 131  agtcctggcagtagtagtagaccatgtggcgctgctgcgcccaccgcatcgccgcgtact 190
            ||||||||||||||||||||||||||   | |||||||||||||| ||| ||||| | ||
Sbjct: 1068 agtcctggcagtagtagtagaccatggacctctgctgcgcccacctcatggccgccttct 1009

                 
Query: 191  gctgc 195
            |||||
Sbjct: 1008 gctgc 1004
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>dbj|AK104060.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G01, full
           insert sequence
          Length = 1186

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                       
Query: 295 acgaagggctggtagcggtagtcggcccggtgcctgccgtcgtcggtggcccagtcggag 354
           ||||||||||||||||||||||||| |  ||  | |||| ||||||||||||||||||||
Sbjct: 803 acgaagggctggtagcggtagtcggacttgtagcggccgccgtcggtggcccagtcggag 744

              
Query: 355 gcg 357
           |||
Sbjct: 743 gcg 741



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 131 agtcctggcagtagtagtagaccatgtggcgctgctgcgcccaccgcatcgccgcgtact 190
           ||||||||||||||||||||||||||   | |||||||||||||| ||| ||||| | ||
Sbjct: 973 agtcctggcagtagtagtagaccatggacctctgctgcgcccacctcatggccgccttct 914

                
Query: 191 gctgc 195
           |||||
Sbjct: 913 gctgc 909
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>dbj|AK061126.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G12, full
           insert sequence
          Length = 1193

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                       
Query: 295 acgaagggctggtagcggtagtcggcccggtgcctgccgtcgtcggtggcccagtcggag 354
           ||||||||||||||||||||||||| |  ||  | |||| ||||||||||||||||||||
Sbjct: 810 acgaagggctggtagcggtagtcggacttgtagcggccgccgtcggtggcccagtcggag 751

              
Query: 355 gcg 357
           |||
Sbjct: 750 gcg 748



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 131 agtcctggcagtagtagtagaccatgtggcgctgctgcgcccaccgcatcgccgcgtact 190
           ||||||||||||||||||||||||||   | |||||||||||||| ||| ||||| | ||
Sbjct: 980 agtcctggcagtagtagtagaccatggacctctgctgcgcccacctcatggccgccttct 921

                
Query: 191 gctgc 195
           |||||
Sbjct: 920 gctgc 916
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>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03,
             complete sequence
          Length = 116214

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                         
Query: 295   acgaagggctggtagcggtagtcggcccggtgcctgccgtcgtcggtggcccagtcggag 354
             ||||||||||||||||||||||||| |  ||  | |||| ||||||||||||||||||||
Sbjct: 70005 acgaagggctggtagcggtagtcggacttgtagcggccgccgtcggtggcccagtcggag 70064

                
Query: 355   gcg 357
             |||
Sbjct: 70065 gcg 70067



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                         
Query: 131   agtcctggcagtagtagtagaccatgtggcgctgctgcgcccaccgcatcgccgcgtact 190
             ||||||||||||||||||||||||||   | |||||||||||||| ||| ||||| | ||
Sbjct: 69835 agtcctggcagtagtagtagaccatggacctctgctgcgcccacctcatggccgccttct 69894

                  
Query: 191   gctgc 195
             |||||
Sbjct: 69895 gctgc 69899
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>ref|NM_197892.1| Oryza sativa (japonica cultivar-group) putative endoxyloglucan
           transferase (OSJNBa0035H01.1), mRNA
          Length = 1036

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 324 gtgcctgccgtcgtcggtggcccagtcggag 354
           |||||||||| |||||||||||||| |||||
Sbjct: 691 gtgcctgccgccgtcggtggcccaggcggag 661
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>gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 genomic sequence,
            complete sequence
          Length = 64582

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 324  gtgcctgccgtcgtcggtggcccagtcggag 354
            |||||||||| |||||||||||||| |||||
Sbjct: 4468 gtgcctgccgccgtcggtggcccaggcggag 4498
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>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete
              sequence
          Length = 143961

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 324    gtgcctgccgtcgtcggtggcccagtcggag 354
              |||||||||| |||||||||||||| |||||
Sbjct: 141173 gtgcctgccgccgtcggtggcccaggcggag 141203
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>dbj|AK068365.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146O14, full
           insert sequence
          Length = 1316

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 324 gtgcctgccgtcgtcggtggcccagtcggag 354
           |||||||||| |||||||||||||| |||||
Sbjct: 833 gtgcctgccgccgtcggtggcccaggcggag 803
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>dbj|AK058540.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-B06, full
            insert sequence
          Length = 1718

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 324  gtgcctgccgtcgtcggtggcccagtcggag 354
            |||||||||| |||||||||||||| |||||
Sbjct: 1226 gtgcctgccgccgtcggtggcccaggcggag 1196
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>emb|BX295537.1| Platypus DNA sequence from clone XX-200B24, complete sequence
          Length = 137155

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 243    gggcggggcgccgggcccgcacccgg 268
              |||||||||||||| |||||||||||
Sbjct: 120370 gggcggggcgccggacccgcacccgg 120345
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 328     ctgccgtcgtcggtggcccag 348
               |||||||||||||||||||||
Sbjct: 3310060 ctgccgtcgtcggtggcccag 3310080
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>dbj|AK060094.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-E12, full
           insert sequence
          Length = 1047

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 324 gtgcctgccgtcgtcggtggcccag 348
           |||||||||| ||||||||||||||
Sbjct: 518 gtgcctgccgccgtcggtggcccag 494
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>gb|AE010415.1| Methanopyrus kandleri AV19 section 114 of 157 of the complete genome
          Length = 11829

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 246  cggggcgccgggcccgcacc 265
            ||||||||||||||||||||
Sbjct: 4031 cggggcgccgggcccgcacc 4012
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 228     gaccgggcggcacgagggcggggcgccg 255
               |||||||| || ||||||||||||||||
Sbjct: 2933876 gaccgggcagctcgagggcggggcgccg 2933849
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>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 219     ggacgcccggaccgggcggc 238
               ||||||||||||||||||||
Sbjct: 1243165 ggacgcccggaccgggcggc 1243184
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>emb|AJ131245.1|HSA131245 Homo sapiens mRNA for Sec24 protein (Sec24B isoform)
          Length = 4758

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 249 ggcgccgggcccgcacccgg 268
           ||||||||||||||||||||
Sbjct: 274 ggcgccgggcccgcacccgg 255
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>gb|AY643478.1| Edwardsiella tarda strain PPD130/91 putative type III secretion
            system gene cluster, complete sequence
          Length = 41204

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 300  gggctggtagcggtagtcggcccg 323
            ||||||||||||||| ||||||||
Sbjct: 5497 gggctggtagcggtattcggcccg 5520
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>ref|NM_006323.1| Homo sapiens SEC24 related gene family, member B (S. cerevisiae)
           (SEC24B), mRNA
          Length = 4758

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 249 ggcgccgggcccgcacccgg 268
           ||||||||||||||||||||
Sbjct: 274 ggcgccgggcccgcacccgg 255
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 252     gccgggcccgcacccggcgaccacgaag 279
               ||||||||||| ||||| ||||||||||
Sbjct: 4210235 gccgggcccgcccccggtgaccacgaag 4210262
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>gb|AC138782.4| Homo sapiens BAC clone RP11-264J9 from 4, complete sequence
          Length = 64744

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   ggcgccgggcccgcacccgg 268
             ||||||||||||||||||||
Sbjct: 24179 ggcgccgggcccgcacccgg 24160
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    ctgcgcccaccgcatcgccg 184
              ||||||||||||||||||||
Sbjct: 842991 ctgcgcccaccgcatcgccg 842972
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>gb|BC040137.1| Homo sapiens cDNA clone IMAGE:5492331, containing frame-shift
           errors
          Length = 4619

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 249 ggcgccgggcccgcacccgg 268
           ||||||||||||||||||||
Sbjct: 132 ggcgccgggcccgcacccgg 113


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,763,286
Number of Sequences: 3902068
Number of extensions: 1763286
Number of successful extensions: 33766
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33365
Number of HSP's gapped (non-prelim): 391
length of query: 357
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 335
effective length of database: 17,147,199,772
effective search space: 5744311923620
effective search space used: 5744311923620
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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