>DPOL_HBVA4 (Q05486) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 843

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 73  TRCHNSLLAQAALASKRQQENETANQ*ITTPNRHTRT 183
           TRC N+L +++A    +    E AN  ++T  RHT T
Sbjct: 262 TRCVNNLASRSASCFHQSAVREKANPSLSTSKRHTST 298

>SYM1_ASHGO (Q754F0) Protein SYM1|
          Length = 182

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 18/54 (33%), Positives = 22/54 (40%)
 Frame = +1

Query: 169 RHTRTHPSNRERRRHCCPAAFFPSTALLISTAPTAGRGGQVHVARIGLATTWWS 330
           R  + H +N   R  C    F P    L  TA     GG +   RI L+  WWS
Sbjct: 80  RLPQAHWANVLARVACDQLIFAPIGVPLYYTAMALMEGGSLEDVRIRLSEKWWS 133

>GLUA1_ORYSA (P07728) Glutelin type-A 1 precursor (Glutelin type I) [Contains:|
           Glutelin type-A 1 acidic chain; Glutelin type-A 1 basic
           chain]
          Length = 499

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 98  HRLHWQASGSRKMRRQISKSPRQIDTHARIHPIENGGAIAAP 223
           ++  +Q SG  ++    S+S +  D H +IH    G  IA P
Sbjct: 126 YQQQFQQSGQAQLTESQSQSQKFKDEHQKIHRFRQGDVIALP 167

>CO8A_RABIT (P98136) Complement component C8 alpha chain precursor (Complement|
           component 8 alpha subunit)
          Length = 585

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 17/62 (27%), Positives = 24/62 (38%)
 Frame = +1

Query: 31  PCFKNPNKSMPS*HTRCHNSLLAQAALASKRQQENETANQ*ITTPNRHTRTHPSNRERRR 210
           PCF N    +     RC  SL  Q     + +Q+   A+   +     +      RERRR
Sbjct: 502 PCFNNGKPILEGTSCRCQCSLGLQGPACEQTEQQGAKADGHWSCWGSWSPCTAGTRERRR 561

Query: 211 HC 216
            C
Sbjct: 562 EC 563

>GLUA2_ORYSA (P07730) Glutelin type-A 2 precursor (Glutelin type II) [Contains:|
           Glutelin type-A 2 acidic chain; Glutelin type-A 2 basic
           chain]
          Length = 499

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 98  HRLHWQASGSRKMRRQISKSPRQIDTHARIHPIENGGAIAAP 223
           ++  +Q SG  ++    S+S +  D H +IH    G  IA P
Sbjct: 126 YQQQFQQSGQAQLTESQSQSHKFKDEHQKIHRFRQGDVIALP 167

>SUT13_ARATH (Q9FEP7) Sulfate transporter 1.3|
          Length = 656

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 179 ARIHPIENGGAIAAPPRSSPRR 244
           AR HP+++ G I+   RSSPR+
Sbjct: 3   ARAHPVDDDGEISPVERSSPRQ 24

>FLP_STAAU (Q9KJ74) Protein flp (FmtA-like protein)|
          Length = 498

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 223 RGSNGAAVLDWMDACVCVDLAW*FTDLP 140
           R S   AVL W+  C+C+ LA     LP
Sbjct: 422 RRSKRIAVLSWLSLCICIALALILYALP 449

>FLP_STAAC (Q5HDB2) Protein flp (FmtA-like protein)|
          Length = 498

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 223 RGSNGAAVLDWMDACVCVDLAW*FTDLP 140
           R S   AVL W+  C+C+ LA     LP
Sbjct: 422 RRSKRIAVLSWLSLCICIALALILYALP 449

>YQS3_CAEEL (Q09311) Hypothetical protein F21H12.3|
          Length = 62

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = -3

Query: 80  QRVCQLGI--DLFGFLKHGE*RKRV 12
           Q+VC LG+  DLF  LKH E  K +
Sbjct: 28  QKVCHLGMKADLFALLKHAEIMKHI 52


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,159,477
Number of Sequences: 219361
Number of extensions: 875268
Number of successful extensions: 2441
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2441
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)