>gb|AY108011.1| Zea mays PCO081127 mRNA sequence
          Length = 697

 Score =  125 bits (63), Expect = 1e-25
 Identities = 149/178 (83%)
 Strand = Plus / Minus

                                                                       
Query: 146 tacttccccagtatgtcagcctcaaggttcaccttatccccaacctttttcctgggcagc 205
           |||||||||||||| || ||||| ||||||||||| || || ||||| ||  | ||||||
Sbjct: 435 tacttccccagtatatccgcctccaggttcaccttgtctccgaccttcttggtcggcagc 376

                                                                       
Query: 206 acaacattgtcctgcgtgtagcgcacaagcatgaagtcaaaccacccggcctcctcgttc 265
           || |  |||||||||||||| |  || ||||||||||||||||| ||| | || |||| |
Sbjct: 375 acgatgttgtcctgcgtgtacctgacgagcatgaagtcaaaccagccgccntcgtcgtcc 316

                                                                     
Query: 266 acattgacaacggtgaggctggttccgtccacggcgacaaaccccttgggcacgagca 323
           ||| ||||||| |||||||| || ||||| |||||||| || ||||||||||||||||
Sbjct: 315 acactgacaacagtgaggctagtgccgtcgacggcgacgaagcccttgggcacgagca 258

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  117 bits (59), Expect = 2e-23
 Identities = 173/211 (81%)
 Strand = Plus / Minus

                                                                            
Query: 113      gcctccaatctccctgcaagcagcttcactacatacttccccagtatgtcagcctcaagg 172
                |||||||||||||| || || |||||| | || ||||| || |||||||| ||||| |||
Sbjct: 21671824 gcctccaatctcccggcgaggagcttctcgacgtacttgccgagtatgtcggcctcgagg 21671765

                                                                            
Query: 173      ttcaccttatccccaacctttttcctgggcagcacaacattgtcctgcgtgtagcgcaca 232
                |||||||| ||||||||||| ||  | |||||||| |  |||||||| ||||| | ||| 
Sbjct: 21671764 ttcaccttgtccccaaccttcttgttcggcagcacgatgttgtcctgggtgtacctcacc 21671705

                                                                            
Query: 233      agcatgaagtcaaaccacccggcctcctcgttcacattgacaacggtgaggctggttccg 292
                ||||||||||| ||||||||| | |||||||  || || || ||||||||||| |  |||
Sbjct: 21671704 agcatgaagtcgaaccacccgccttcctcgtcgacgttcaccacggtgaggctcgcgccg 21671645

                                               
Query: 293      tccacggcgacaaaccccttgggcacgagca 323
                || |||||||| || ||||||| ||| ||||
Sbjct: 21671644 tcgacggcgacgaagcccttggacaccagca 21671614

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  117 bits (59), Expect = 2e-23
 Identities = 173/211 (81%)
 Strand = Plus / Minus

                                                                            
Query: 113      gcctccaatctccctgcaagcagcttcactacatacttccccagtatgtcagcctcaagg 172
                |||||||||||||| || || |||||| | || ||||| || |||||||| ||||| |||
Sbjct: 21600169 gcctccaatctcccggcgaggagcttctcgacgtacttgccgagtatgtcggcctcgagg 21600110

                                                                            
Query: 173      ttcaccttatccccaacctttttcctgggcagcacaacattgtcctgcgtgtagcgcaca 232
                |||||||| ||||||||||| ||  | |||||||| |  |||||||| ||||| | ||| 
Sbjct: 21600109 ttcaccttgtccccaaccttcttgttcggcagcacgatgttgtcctgggtgtacctcacc 21600050

                                                                            
Query: 233      agcatgaagtcaaaccacccggcctcctcgttcacattgacaacggtgaggctggttccg 292
                ||||||||||| ||||||||| | |||||||  || || || ||||||||||| |  |||
Sbjct: 21600049 agcatgaagtcgaaccacccgccttcctcgtcgacgttcaccacggtgaggctcgcgccg 21599990

                                               
Query: 293      tccacggcgacaaaccccttgggcacgagca 323
                || |||||||| || ||||||| ||| ||||
Sbjct: 21599989 tcgacggcgacgaagcccttggacaccagca 21599959

>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 186030

 Score =  117 bits (59), Expect = 2e-23
 Identities = 173/211 (81%)
 Strand = Plus / Plus

                                                                          
Query: 113    gcctccaatctccctgcaagcagcttcactacatacttccccagtatgtcagcctcaagg 172
              |||||||||||||| || || |||||| | || ||||| || |||||||| ||||| |||
Sbjct: 140727 gcctccaatctcccggcgaggagcttctcgacgtacttgccgagtatgtcggcctcgagg 140786

                                                                          
Query: 173    ttcaccttatccccaacctttttcctgggcagcacaacattgtcctgcgtgtagcgcaca 232
              |||||||| ||||||||||| ||  | |||||||| |  |||||||| ||||| | ||| 
Sbjct: 140787 ttcaccttgtccccaaccttcttgttcggcagcacgatgttgtcctgggtgtacctcacc 140846

                                                                          
Query: 233    agcatgaagtcaaaccacccggcctcctcgttcacattgacaacggtgaggctggttccg 292
              ||||||||||| ||||||||| | |||||||  || || || ||||||||||| |  |||
Sbjct: 140847 agcatgaagtcgaaccacccgccttcctcgtcgacgttcaccacggtgaggctcgcgccg 140906

                                             
Query: 293    tccacggcgacaaaccccttgggcacgagca 323
              || |||||||| || ||||||| ||| ||||
Sbjct: 140907 tcgacggcgacgaagcccttggacaccagca 140937

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 175      caccttatccccaacctttttcctgg 200
                ||||||||||||| ||||||||||||
Sbjct: 19488800 caccttatccccaccctttttcctgg 19488775

>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0476H10
          Length = 151703

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 175    caccttatccccaacctttttcctgg 200
              ||||||||||||| ||||||||||||
Sbjct: 106327 caccttatccccaccctttttcctgg 106302

>emb|BX000440.10| Zebrafish DNA sequence from clone CH211-14L9 in linkage group 16,
             complete sequence
          Length = 162906

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 6     aaaatgcattattattattgataaa 30
             ||||||||||||||||||| |||||
Sbjct: 93214 aaaatgcattattattattaataaa 93238

>emb|BX539346.8| Zebrafish DNA sequence from clone DKEYP-73G7 in linkage group 23,
              complete sequence
          Length = 171486

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     attattattattgataaacaa 33
              |||||||||||||||||||||
Sbjct: 101054 attattattattgataaacaa 101034

>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome
          Length = 2694756

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 26      ataaacaagaataccctgcac 46
               |||||||||||||||||||||
Sbjct: 1972172 ataaacaagaataccctgcac 1972192

>gb|AC083800.13| Homo sapiens 3q BAC RP11-484M3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 181395

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    attattattgataaacaagaa 36
             |||||||||||||||||||||
Sbjct: 52699 attattattgataaacaagaa 52679

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 5       caaaatgcattattattattg 25
               |||||||||||||||||||||
Sbjct: 5319558 caaaatgcattattattattg 5319538

>gb|AC098617.5| Homo sapiens BAC clone RP11-56I1 from 2, complete sequence
          Length = 142812

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     attattattattgataaacaa 33
              |||||||||||||||||||||
Sbjct: 117604 attattattattgataaacaa 117584

>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0610E02
          Length = 135816

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 5      caaaatgcattattattattg 25
              |||||||||||||||||||||
Sbjct: 111146 caaaatgcattattattattg 111126

>emb|CR762406.10| Zebrafish DNA sequence from clone DKEY-13D23 in linkage group 1, complete
              sequence
          Length = 144021

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 2      ctgcaaaatgcattattattattg 25
              ||||||||| ||||||||||||||
Sbjct: 127211 ctgcaaaatccattattattattg 127188

>emb|Z66562.1|CEF42E11 Caenorhabditis elegans Cosmid F42E11, complete sequence
          Length = 30382

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 5    caaaatgcattattattattgataaaca 32
            |||||||||||||||| | |||||||||
Sbjct: 4974 caaaatgcattattatcactgataaaca 5001

>gb|AC123869.4| Mus musculus BAC clone RP23-245M16 from 12, complete sequence
          Length = 167795

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     aaaatgcattattattattg 25
             ||||||||||||||||||||
Sbjct: 62546 aaaatgcattattattattg 62565

>emb|AL831732.18| Human DNA sequence from clone RP11-396L10 on chromosome 1, complete
             sequence
          Length = 38529

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     aaaatgcattattattattg 25
             ||||||||||||||||||||
Sbjct: 26637 aaaatgcattattattattg 26656

>emb|AL583854.7| Human DNA sequence from clone RP11-570K4 on chromosome 6 Contains part of
              a novel gene, complete sequence
          Length = 135953

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     attattattattgataaaca 32
              ||||||||||||||||||||
Sbjct: 122675 attattattattgataaaca 122694

>emb|AL645804.8| Zebrafish DNA sequence from clone BUSM1-25N23 Contains the 3' part of a
             novel gene similar to CBL (Cas-Br-M (murine) ecotropic
             retroviral transforming sequence), the 3' part of the
             alcam gene for activated leukocyte cell adhesion molecule
             and a putative novel gene, complete sequence
          Length = 119087

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    attattattattgataaaca 32
             ||||||||||||||||||||
Sbjct: 21308 attattattattgataaaca 21327

>emb|CR391966.8| Zebrafish DNA sequence from clone CH211-269M15 in linkage group 8,
             complete sequence
          Length = 105854

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    attattattattgataaaca 32
             ||||||||||||||||||||
Sbjct: 40918 attattattattgataaaca 40899

>emb|BX294128.19| Zebrafish DNA sequence from clone DKEYP-35F12 in linkage group 10,
             complete sequence
          Length = 160042

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     caaaatgcattattattatt 24
             ||||||||||||||||||||
Sbjct: 37319 caaaatgcattattattatt 37338

>emb|BX897696.12| Zebrafish DNA sequence from clone DKEY-111B14 in linkage group 20,
             complete sequence
          Length = 175787

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     caaaatgcattattattatt 24
             ||||||||||||||||||||
Sbjct: 71434 caaaatgcattattattatt 71415

>gb|AY968672.1| Campanulotes bidentatus compar mitochondrion, complete genome
          Length = 14804

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 15  tattattattgataaacaagaata 38
           ||||| ||||||||||||||||||
Sbjct: 519 tattactattgataaacaagaata 496

>gb|AC099793.2| Homo sapiens chromosome 1 clone RP11-565N2, complete sequence
          Length = 169841

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    aacaggcacagctcaagaag 92
             ||||||||||||||||||||
Sbjct: 16318 aacaggcacagctcaagaag 16299

>emb|BX890539.20| Zebrafish DNA sequence from clone CH211-241B2, complete sequence
          Length = 164402

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     caaaatgcattattattatt 24
             ||||||||||||||||||||
Sbjct: 92639 caaaatgcattattattatt 92658

>emb|BX248236.16| Zebrafish DNA sequence from clone CH211-207B24 in linkage group 3,
             complete sequence
          Length = 228572

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     aaaatgcattattattattg 25
             ||||||||||||||||||||
Sbjct: 45813 aaaatgcattattattattg 45832

>emb|BX119923.12| Zebrafish DNA sequence from clone CH211-203B17 in linkage group 23,
             complete sequence
          Length = 159232

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     aaaatgcattattattattg 25
             ||||||||||||||||||||
Sbjct: 26527 aaaatgcattattattattg 26546

>emb|BX005041.11| Zebrafish DNA sequence from clone DKEY-38L12 in linkage group 18,
              complete sequence
          Length = 190853

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      caaaatgcattattattatt 24
              ||||||||||||||||||||
Sbjct: 144843 caaaatgcattattattatt 144862

>emb|BX247899.17| Zebrafish DNA sequence from clone CH211-229B6 in linkage group 19,
              complete sequence
          Length = 150160

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      caaaatgcattattattatt 24
              ||||||||||||||||||||
Sbjct: 135143 caaaatgcattattattatt 135162

>gb|CP000208.1| Drosophila melanogaster genomic scaffold 211000022280732
          Length = 94131

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 1     actgcaaaatgcattattattattgata 28
             |||||||||| ||||||||||| |||||
Sbjct: 22563 actgcaaaattcattattattaatgata 22590


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,311,727
Number of Sequences: 3902068
Number of extensions: 4311727
Number of successful extensions: 81921
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81794
Number of HSP's gapped (non-prelim): 127
length of query: 333
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 311
effective length of database: 17,147,199,772
effective search space: 5332779129092
effective search space used: 5332779129092
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)