ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast37d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009213.1| Triticum aestivum clone wle1n.pk0057.g6:fis, full... 470 e-129
2gb|BT016719.1| Zea mays clone Contig552 mRNA sequence 96 1e-16
3gb|AY103861.1| Zea mays PCO062153 mRNA sequence 96 1e-16
4ref|XM_475913.1| Oryza sativa (japonica cultivar-group), predic... 92 2e-15
5gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome... 92 2e-15
6gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome... 92 2e-15
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
8dbj|AK073698.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
9gb|BT017838.1| Zea mays clone EL01N0509G03.c mRNA sequence 60 6e-06
10gb|BT016218.1| Zea mays clone Contig51 mRNA sequence 60 6e-06
11gb|AY108006.1| Zea mays PCO144615 mRNA sequence 60 6e-06
12ref|NM_112364.2| Arabidopsis thaliana malate dehydrogenase/ oxid... 50 0.006
13gb|AY093788.1| Arabidopsis thaliana AT3g15020/K15M2_16 mRNA, com... 50 0.006
14gb|AY045592.1| Arabidopsis thaliana AT3g15020/K15M2_16 mRNA, com... 50 0.006
15emb|BX824867.1|CNS0A5NF Arabidopsis thaliana Full-length cDNA Co... 50 0.006
16emb|BX824034.1|CNS0A5H3 Arabidopsis thaliana Full-length cDNA Co... 50 0.006
17gb|AY089112.1| Arabidopsis thaliana clone 34499 mRNA, complete s... 50 0.006
18dbj|AP000370.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 50 0.006
19gb|DQ083216.1| Oryza sativa (indica cultivar-group) clone 8S2F40... 46 0.091
20ref|NM_192352.1| Oryza sativa (japonica cultivar-group), predic... 44 0.36
21gb|AF444195.1| Oryza sativa malate dehydrogenase (MDH) mRNA, com... 44 0.36
22gb|AC092643.2| Homo sapiens BAC clone RP11-393P9 from 4, complet... 44 0.36
23dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
24dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
25dbj|AK104770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
26dbj|AK071699.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
27dbj|AP003053.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
28gb|AC093803.3| Homo sapiens BAC clone RP11-319N12 from 4, comple... 42 1.4
29gb|AC025821.7| Homo sapiens BAC clone RP11-472F4 from 4, complet... 42 1.4
30gb|AC023795.18| Homo sapiens 12 BAC RP11-242B24 (Roswell Park Ca... 42 1.4
31ref|XM_953561.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.6
32gb|AY046315.3| Bradyrhizobium japonicum inner membrane ABC trans... 40 5.6
33ref|XM_330808.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.6
34gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 5.6
35gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 5.6
36ref|XM_383918.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 5.6
37emb|AL121581.41|HS1022E24 Human DNA sequence from clone RP5-1022... 40 5.6
38gb|AC000353.27| Homo sapiens Chromosome 11q13 BAC Clone 18h3, co... 40 5.6
39gb|AC079776.5| Homo sapiens BAC clone RP11-315H12 from 2, comple... 40 5.6
40dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.6
41dbj|AP000944.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 5.6 
>gb|BT009213.1| Triticum aestivum clone wle1n.pk0057.g6:fis, full insert mRNA
            sequence
          Length = 1405

 Score =  470 bits (237), Expect = e-129
 Identities = 373/414 (90%), Gaps = 12/414 (2%)
 Strand = Plus / Minus

                                                                        
Query: 10   aatataatgcccagatagaatcttcggtttcccttcgtgatctcgggtacgaatgctaca 69
            ||||||||||||| |  ||||| || ||||| |||| ||||||||||||||||||||| |
Sbjct: 1290 aatataatgcccaca--gaatcctcagtttcgcttc-tgatctcgggtacgaatgctata 1234

                                                                        
Query: 70   aacacataggcaccggtgtccgctgtttctggcactacaggtttagttcagtctggcga- 128
            | |||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||| 
Sbjct: 1233 agcacataggcaccggtgtctgctgtttctggtactacaggttcagttcagtctggcgag 1174

                                                                        
Query: 129  -catcaaagccagtagtacattttattggggagcacgacgatgcctcgatgccccacggc 187
             ||||||||||||||   |||||||||| |||||||||||| ||||||||||||| | ||
Sbjct: 1173 acatcaaagccagta---cattttattgcggagcacgacgacgcctcgatgccccgcagc 1117

                                                                        
Query: 188  ataaccggattggggggcaacggaagcggtcgaacaaaaattgcatgagttcaagtgtga 247
            | |||||| || || ||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 1116 acaaccgggtttggaggcaacgaaagcggccgaacaaaaattgcatgagttcaagtgtga 1057

                                                                        
Query: 248  accatt----ataggctgggcaggtcgccgcctagctctcctgcgcaaacttgacaccct 303
            ||| ||    |||||||| ||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 1056 accgttcgatataggctgagcaggtcgccgcctagctctcctgcgcgaacttgaccccct 997

                                                                        
Query: 304  tctcgatggaagacagcagctcgcccttgaggctttccagcccctccttctccaaggccg 363
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 996  tctcgatggaagacagcagctcgcccttgaggctctccagcccctccttctccaaggccg 937

                                                                  
Query: 364  atagctcgcccagcccaagcacttcctccactccgctcttgcccagccttacct 417
            | |||||||||||||| | ||||||||||||||| |||||||||||||| ||||
Sbjct: 936  acagctcgcccagccccatcacttcctccactccactcttgcccagcctcacct 883
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>gb|BT016719.1| Zea mays clone Contig552 mRNA sequence
          Length = 1581

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 105/124 (84%)
 Strand = Plus / Minus

                                                                        
Query: 288  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
            |||||||||| |||||| ||||||||||||   ||||||||||||||| |||||||||||
Sbjct: 1179 gcaaacttgatacccttgtcgatggaagacttgagctcgcccttgaggttttccagcccc 1120

                                                                        
Query: 348  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 407
            | |||||| ||  |    ||||| ||||| ||||||||||||||||||||  ||||||| 
Sbjct: 1119 ttcttctcgaactcgttgagctcacccagaccaagcacttcctccactccattcttgccg 1060

                
Query: 408  agcc 411
            ||||
Sbjct: 1059 agcc 1056
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>gb|AY103861.1| Zea mays PCO062153 mRNA sequence
          Length = 1633

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 105/124 (84%)
 Strand = Plus / Minus

                                                                        
Query: 288  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
            |||||||||| |||||| ||||||||||||   ||||||||||||||| |||||||||||
Sbjct: 1178 gcaaacttgatacccttgtcgatggaagacttgagctcgcccttgaggttttccagcccc 1119

                                                                        
Query: 348  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 407
            | |||||| ||  |    ||||| ||||| ||||||||||||||||||||  ||||||| 
Sbjct: 1118 ttcttctcgaactcgttgagctcacccagaccaagcacttcctccactccattcttgccg 1059

                
Query: 408  agcc 411
            ||||
Sbjct: 1058 agcc 1055
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>ref|XM_475913.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1023

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 109/130 (83%)
 Strand = Plus / Minus

                                                                        
Query: 288  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
            ||||||||||  |||||||| || ||||||   ||||| ||||| ||| | ||||| |||
Sbjct: 1010 gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 951

                                                                        
Query: 348  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 407
            |||||||| ||  | || |||| |||||||||||| ||||||||||||||| ||||||| 
Sbjct: 950  tccttctcaaactcggaaagctggcccagcccaagtacttcctccactccgttcttgcca 891

                      
Query: 408  agccttacct 417
            ||||||||||
Sbjct: 890  agccttacct 881
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>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
              complete sequence
          Length = 187034

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 109/130 (83%)
 Strand = Plus / Plus

                                                                          
Query: 288    gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
              ||||||||||  |||||||| || ||||||   ||||| ||||| ||| | ||||| |||
Sbjct: 181852 gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 181911

                                                                          
Query: 348    tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 407
              |||||||| ||  | || |||| |||||||||||| ||||||||||||||| ||||||| 
Sbjct: 181912 tccttctcaaactcggaaagctggcccagcccaagtacttcctccactccgttcttgcca 181971

                        
Query: 408    agccttacct 417
              ||||||||||
Sbjct: 181972 agccttacct 181981
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>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08,
             complete sequence
          Length = 119500

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 109/130 (83%)
 Strand = Plus / Plus

                                                                         
Query: 288   gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
             ||||||||||  |||||||| || ||||||   ||||| ||||| ||| | ||||| |||
Sbjct: 32534 gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 32593

                                                                         
Query: 348   tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 407
             |||||||| ||  | || |||| |||||||||||| ||||||||||||||| ||||||| 
Sbjct: 32594 tccttctcaaactcggaaagctggcccagcccaagtacttcctccactccgttcttgcca 32653

                       
Query: 408   agccttacct 417
             ||||||||||
Sbjct: 32654 agccttacct 32663
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 109/130 (83%)
 Strand = Plus / Plus

                                                                            
Query: 288      gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
                ||||||||||  |||||||| || ||||||   ||||| ||||| ||| | ||||| |||
Sbjct: 28397610 gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 28397669

                                                                            
Query: 348      tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 407
                |||||||| ||  | || |||| |||||||||||| ||||||||||||||| ||||||| 
Sbjct: 28397670 tccttctcaaactcggaaagctggcccagcccaagtacttcctccactccgttcttgcca 28397729

                          
Query: 408      agccttacct 417
                ||||||||||
Sbjct: 28397730 agccttacct 28397739
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>dbj|AK073698.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057I02, full
            insert sequence
          Length = 1303

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 109/130 (83%)
 Strand = Plus / Minus

                                                                        
Query: 288  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
            ||||||||||  |||||||| || ||||||   ||||| ||||| ||| | ||||| |||
Sbjct: 1067 gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 1008

                                                                        
Query: 348  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 407
            |||||||| ||  | || |||| |||||||||||| ||||||||||||||| ||||||| 
Sbjct: 1007 tccttctcaaactcggaaagctggcccagcccaagtacttcctccactccgttcttgcca 948

                      
Query: 408  agccttacct 417
            ||||||||||
Sbjct: 947  agccttacct 938
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>gb|BT017838.1| Zea mays clone EL01N0509G03.c mRNA sequence
          Length = 1337

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 105/130 (80%)
 Strand = Plus / Minus

                                                                        
Query: 288  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
            |||||||||| ||||||||| || ||||||   ||||||| ||||||  | |||| ||| 
Sbjct: 1039 gcaaacttgatacccttctcaatcgaagacttgagctcgctcttgagcttctccaaccct 980

                                                                        
Query: 348  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 407
            || ||||| ||| |||| ||||| || |  |||||||||||||| |||||  |||| || 
Sbjct: 979  tctttctcaaagtccgacagctcacctaatccaagcacttcctcaactccattcttccca 920

                      
Query: 408  agccttacct 417
            ||||||||||
Sbjct: 919  agccttacct 910
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>gb|BT016218.1| Zea mays clone Contig51 mRNA sequence
          Length = 1263

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 105/130 (80%)
 Strand = Plus / Minus

                                                                       
Query: 288 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
           |||||||||| ||||||||| || ||||||   ||||||| ||||||  | |||| ||| 
Sbjct: 973 gcaaacttgatacccttctcaatcgaagacttgagctcgctcttgagcttctccaaccct 914

                                                                       
Query: 348 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 407
           || ||||| ||| |||| ||||| || |  |||||||||||||| |||||  |||| || 
Sbjct: 913 tctttctcaaagtccgacagctcacctaatccaagcacttcctcaactccattcttccca 854

                     
Query: 408 agccttacct 417
           ||||||||||
Sbjct: 853 agccttacct 844
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>gb|AY108006.1| Zea mays PCO144615 mRNA sequence
          Length = 701

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 105/130 (80%)
 Strand = Plus / Minus

                                                                       
Query: 288 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
           |||||||||| ||||||||| || ||||||   ||||||| ||||||  | |||| ||| 
Sbjct: 423 gcaaacttgatacccttctcaatcgaagacttgagctcgctcttgagcttctccaaccct 364

                                                                       
Query: 348 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 407
           || ||||| ||| |||| ||||| || |  |||||||||||||| |||||  |||| || 
Sbjct: 363 tctttctcaaagtccgacagctcacctaatccaagcacttcctcaactccattcttccca 304

                     
Query: 408 agccttacct 417
           ||||||||||
Sbjct: 303 agccttacct 294
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>ref|NM_112364.2| Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT3G15020
           mRNA, complete cds
          Length = 1396

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 381 agcacttcctccactccgctcttgcccagccttacct 417
           |||||||||||||||||| |||| ||||| |||||||
Sbjct: 986 agcacttcctccactccgttctttcccagtcttacct 950
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>gb|AY093788.1| Arabidopsis thaliana AT3g15020/K15M2_16 mRNA, complete cds
          Length = 1026

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 381 agcacttcctccactccgctcttgcccagccttacct 417
           |||||||||||||||||| |||| ||||| |||||||
Sbjct: 923 agcacttcctccactccgttctttcccagtcttacct 887
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>gb|AY045592.1| Arabidopsis thaliana AT3g15020/K15M2_16 mRNA, complete cds
          Length = 1396

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 381 agcacttcctccactccgctcttgcccagccttacct 417
           |||||||||||||||||| |||| ||||| |||||||
Sbjct: 986 agcacttcctccactccgttctttcccagtcttacct 950
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>emb|BX824867.1|CNS0A5NF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH79ZA08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1302

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 381 agcacttcctccactccgctcttgcccagccttacct 417
           |||||||||||||||||| |||| ||||| |||||||
Sbjct: 964 agcacttcctccactccgttctttcccagtcttacct 928
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>emb|BX824034.1|CNS0A5H3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH17ZB09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1232

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 381 agcacttcctccactccgctcttgcccagccttacct 417
           |||||||||||||||||| |||| ||||| |||||||
Sbjct: 971 agcacttcctccactccgttctttcccagtcttacct 935
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>gb|AY089112.1| Arabidopsis thaliana clone 34499 mRNA, complete sequence
          Length = 1302

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 381 agcacttcctccactccgctcttgcccagccttacct 417
           |||||||||||||||||| |||| ||||| |||||||
Sbjct: 984 agcacttcctccactccgttctttcccagtcttacct 948
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>dbj|AP000370.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K15M2
          Length = 79279

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 381   agcacttcctccactccgctcttgcccagccttacct 417
             |||||||||||||||||| |||| ||||| |||||||
Sbjct: 53870 agcacttcctccactccgttctttcccagtcttacct 53834
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>gb|DQ083216.1| Oryza sativa (indica cultivar-group) clone 8S2F40 mRNA sequence
          Length = 269

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 77/95 (81%)
 Strand = Plus / Minus

                                                                       
Query: 288 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
           ||||||||||  |||||||| || ||||||   ||||| ||||| ||| | ||||| |||
Sbjct: 96  gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 37

                                              
Query: 348 tccttctccaaggccgatagctcgcccagcccaag 382
           |||||||| ||  | || |||| ||||||||||||
Sbjct: 36  tccttctcaaactcggaaagctggcccagcccaag 2
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>ref|NM_192352.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1023

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                        
Query: 288  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
            ||||| |||| ||||||||| || |||| |   ||||||||||| ||  | ||||| || 
Sbjct: 1013 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 954

                                                              
Query: 348  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactcc 397
            |||||||| ||| | || |||| ||||| |||||| |||||||| |||||
Sbjct: 953  tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactcc 904
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>gb|AF444195.1| Oryza sativa malate dehydrogenase (MDH) mRNA, complete cds; nuclear
            gene for mitochondrial product
          Length = 1257

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                        
Query: 288  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
            ||||| |||| ||||||||| || |||| |   ||||||||||| ||  | ||||| || 
Sbjct: 1029 gcaaatttgatacccttctcaattgaagccttaagctcgcccttaagattctccagtcct 970

                                                              
Query: 348  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactcc 397
            |||||||| ||| | || |||| ||||| |||||| |||||||| |||||
Sbjct: 969  tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactcc 920
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>gb|AC092643.2| Homo sapiens BAC clone RP11-393P9 from 4, complete sequence
          Length = 151902

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 336   ctttccagcccctccttctcca 357
             ||||||||||||||||||||||
Sbjct: 30162 ctttccagcccctccttctcca 30183
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                            
Query: 288      gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
                ||||| |||| ||||||||| || |||| |   ||||||||||| ||  | ||||| || 
Sbjct: 26187887 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 26187828

                                                                  
Query: 348      tccttctccaaggccgatagctcgcccagcccaagcacttcctccactcc 397
                |||||||| ||| | || |||| ||||| |||||| |||||||| |||||
Sbjct: 26187827 tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactcc 26187778
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>dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           BAC clone:OJ1159_D09
          Length = 147770

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 288 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
           ||||| |||| ||||||||| || |||| |   ||||||||||| ||  | ||||| || 
Sbjct: 118 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 59

                                                             
Query: 348 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactcc 397
           |||||||| ||| | || |||| ||||| |||||| |||||||| |||||
Sbjct: 58  tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactcc 9
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>dbj|AK104770.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A07, full
            insert sequence
          Length = 1279

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                        
Query: 288  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
            ||||| |||| ||||||||| || |||| |   ||||||||||| ||  | ||||| || 
Sbjct: 1071 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 1012

                                                              
Query: 348  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactcc 397
            |||||||| ||| | || |||| ||||| |||||| |||||||| |||||
Sbjct: 1011 tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactcc 962
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>dbj|AK071699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108E15, full
            insert sequence
          Length = 1369

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                        
Query: 288  gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
            ||||| |||| ||||||||| || |||| |   ||||||||||| ||  | ||||| || 
Sbjct: 1145 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 1086

                                                              
Query: 348  tccttctccaaggccgatagctcgcccagcccaagcacttcctccactcc 397
            |||||||| ||| | || |||| ||||| |||||| |||||||| |||||
Sbjct: 1085 tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactcc 1036
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>dbj|AP003053.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0047B08
          Length = 57846

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                         
Query: 288   gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 347
             ||||| |||| ||||||||| || |||| |   ||||||||||| ||  | ||||| || 
Sbjct: 29017 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 28958

                                                               
Query: 348   tccttctccaaggccgatagctcgcccagcccaagcacttcctccactcc 397
             |||||||| ||| | || |||| ||||| |||||| |||||||| |||||
Sbjct: 28957 tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactcc 28908
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>gb|AC093803.3| Homo sapiens BAC clone RP11-319N12 from 4, complete sequence
          Length = 191903

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 223   aaaaattgcatgagttcaagt 243
             |||||||||||||||||||||
Sbjct: 81534 aaaaattgcatgagttcaagt 81554
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>gb|AC025821.7| Homo sapiens BAC clone RP11-472F4 from 4, complete sequence
          Length = 178378

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 223    aaaaattgcatgagttcaagt 243
              |||||||||||||||||||||
Sbjct: 152821 aaaaattgcatgagttcaagt 152841
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>gb|AC023795.18| Homo sapiens 12 BAC RP11-242B24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 161838

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 330    ttgaggctttccagcccctccttct 354
              ||||||||||||||||||| |||||
Sbjct: 125985 ttgaggctttccagcccctgcttct 126009
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>ref|XM_953561.1| Neurospora crassa OR74A hypothetical protein (NCU09887.1) partial
           mRNA
          Length = 1017

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 346 cctccttctccaaggccgat 365
           ||||||||||||||||||||
Sbjct: 255 cctccttctccaaggccgat 274
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>gb|AY046315.3| Bradyrhizobium japonicum inner membrane ABC transporter (ndvA) gene,
            partial cds; Pbp, phosphoribosyl-ATP pyrophosphohydrolase
            (his2), DedA (dedA), aspartate ammonium lyase (aspA), and
            fatty acid CoA-ligase (coaL) genes, complete cds; and
            unknown genes
          Length = 10628

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   cacataggcaccggtgtccg 91
            ||||||||||||||||||||
Sbjct: 6278 cacataggcaccggtgtccg 6259
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>ref|XM_330808.1| Neurospora crassa OR74A hypothetical protein (NCU09887.1) partial
           mRNA
          Length = 1017

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 346 cctccttctccaaggccgat 365
           ||||||||||||||||||||
Sbjct: 255 cctccttctccaaggccgat 274
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 317     cagcagctcgcccttgaggc 336
               ||||||||||||||||||||
Sbjct: 1685978 cagcagctcgcccttgaggc 1685997
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 317     cagcagctcgcccttgaggc 336
               ||||||||||||||||||||
Sbjct: 1515698 cagcagctcgcccttgaggc 1515717
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>ref|XM_383918.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03742.1)
           partial mRNA
          Length = 2415

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 cttgacacccttctcgatgg 312
           ||||||||||||||||||||
Sbjct: 372 cttgacacccttctcgatgg 353
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>emb|AL121581.41|HS1022E24 Human DNA sequence from clone RP5-1022E24 on chromosome 20 Contains the
              3' end of the OPRL1 gene for opiate receptor-like 1
              protein, the GPR8 gene encoding a G protein-coupled
              receptor, the KIAA0835 gene encoding a protein similar to
              the myelin transcription factor 1 (MYT1), a novel gene, 7
              CpG islands, ESTs, STSs and GSSs, complete sequence
          Length = 179888

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 343    gcccctccttctccaaggccgata 366
              |||||||||||| |||||||||||
Sbjct: 152628 gcccctccttcttcaaggccgata 152651
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>gb|AC000353.27| Homo sapiens Chromosome 11q13 BAC Clone 18h3, complete sequence
          Length = 233089

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   ccagcccaagcacttcctcc 392
             ||||||||||||||||||||
Sbjct: 96391 ccagcccaagcacttcctcc 96372
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>gb|AC079776.5| Homo sapiens BAC clone RP11-315H12 from 2, complete sequence
          Length = 198961

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 128   acatcaaagccagtagtacatttt 151
             ||||||||||||||| ||||||||
Sbjct: 24909 acatcaaagccagtattacatttt 24932
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 72      cacataggcaccggtgtccg 91
               ||||||||||||||||||||
Sbjct: 1440699 cacataggcaccggtgtccg 1440680
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>dbj|AP000944.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-867O8, complete
             sequence
          Length = 219246

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   ccagcccaagcacttcctcc 392
             ||||||||||||||||||||
Sbjct: 49310 ccagcccaagcacttcctcc 49291


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,120,756
Number of Sequences: 3902068
Number of extensions: 3120756
Number of successful extensions: 52511
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52345
Number of HSP's gapped (non-prelim): 163
length of query: 417
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 395
effective length of database: 17,147,199,772
effective search space: 6773143909940
effective search space used: 6773143909940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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