>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2505

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
 Frame = -3

Query: 444  GQERQRLGRRLAREEGP-----RRHRHRQAQAPTREVVGRGV-PDGG 322
            G+ R+    R   EEGP     RR RHR+   P R   G G  PDGG
Sbjct: 954  GEHRRHRAHRRPGEEGPEDKAERRARHREGSRPARGGEGEGEGPDGG 1000

>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 6/61 (9%)
 Frame = -3

Query: 444  GQERQRLGRRLAREEGP-----RRHRHRQAQAPTREVVGRGV-PDGGSSGWAVHELPVDH 283
            G+ R+    R   E+GP     RR RHR+   P R   G    PDGG  G         H
Sbjct: 959  GEPRRHRVHRRPGEDGPDDKAERRGRHREGSRPARSGEGEAEGPDGGGGGGGERRRRHRH 1018

Query: 282  G 280
            G
Sbjct: 1019 G 1019

>YHEB_CHLVI (P56160) Hypothetical 28.2 kDa protein in hemB 3'region|
          Length = 261

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = -3

Query: 408 REEGPRRHRHRQAQAPTREVVGRGVPDGGSSGWAVHELPVDHGRRW 271
           R++ P     R A+   R+ +    PD G  G    E P  +GRRW
Sbjct: 36  RDDTPVTEADRNAEELIRQGISAKFPDDGLFGEEFDEHPSGNGRRW 81

>BFSP1_BOVIN (Q06002) Filensin (Beaded filament structural protein 1)|
          Length = 756

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -3

Query: 444 GQERQRLGRRLAREEGPRRHR--HRQAQAPTREVVGRGVPDGGSSGWAVHEL 295
           G E  + GR + +EEG  +      +A  PT+E     VPDGG    A  +L
Sbjct: 391 GPEDMKPGRVVIKEEGESKLEPGDEEASPPTQEGAPEDVPDGGKISKAFEKL 442

>MSRA2_RHOBA (Q7UJI2) Peptide methionine sulfoxide reductase msrA 2 (EC 1.8.4.6)|
           (Protein-methionine-S-oxide reductase 2) (Peptide Met(O)
           reductase 2)
          Length = 168

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
 Frame = -2

Query: 175 AGGCFLGRQEISRKKGGWKSV---YTGDQI 95
           AGGCF G Q++ RK  G +S    YTG ++
Sbjct: 8   AGGCFWGMQDLIRKLPGIESTRVGYTGGEV 37

>YHGE_BACSU (P32399) Hypothetical protein yhgE (ORFB)|
          Length = 775

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -1

Query: 383 GTAKPKLRRGKLLEGACQMAALLGGQFTSCQ*IMADDGDHGCFACLLRLKDE--HDYMSF 210
           G+A      GKLL+G  ++++ L         I ADD  +G FA  ++ KD+  H   ++
Sbjct: 520 GSASLDTGLGKLLDGTGELSSKLKDAADQTGDIDADDQTYGMFADPVKTKDDAIHSVPNY 579

Query: 209 G 207
           G
Sbjct: 580 G 580


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,099,630
Number of Sequences: 219361
Number of extensions: 1133573
Number of successful extensions: 2743
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2741
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)