ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast36h02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472376.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 307 aggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggagggc 366 |||||||||||||| |||||||||||||||||||| || ||||||| ||| |||| || | Sbjct: 1034 aggacatggagcgaggcgttcttggtggccgcgcacaccgggcaggcgtcgacggcggcc 975 Query: 367 tcgcacgcaccgcacagggacaggtgccggcac 399 ||||| | | ||||||| | |||||||||||| Sbjct: 974 tcgcagccgcggcacaggcagaggtgccggcac 942
>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14, complete sequence Length = 158312 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 307 aggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggagggc 366 |||||||||||||| |||||||||||||||||||| || ||||||| ||| |||| || | Sbjct: 66998 aggacatggagcgaggcgttcttggtggccgcgcacaccgggcaggcgtcgacggcggcc 66939 Query: 367 tcgcacgcaccgcacagggacaggtgccggcac 399 ||||| | | ||||||| | |||||||||||| Sbjct: 66938 tcgcagccgcggcacaggcagaggtgccggcac 66906 Score = 79.8 bits (40), Expect = 6e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 ||||||||||||| || |||||||||||||| |||||||||||||| | ||| ||| | Sbjct: 12254 aggaggacatggacggaggcgttcttggtggcggcgcagacggggcaagcgtcggcggcg 12313 Query: 364 ggctcgcacgcaccgcacagggacaggtgccggcac 399 | |||||| || ||||||||| ||||||| |||||| Sbjct: 12314 gcctcgcaggcgccgcacaggcacaggtggcggcac 12349
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 307 aggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggagggc 366 |||||||||||||| |||||||||||||||||||| || ||||||| ||| |||| || | Sbjct: 20004335 aggacatggagcgaggcgttcttggtggccgcgcacaccgggcaggcgtcgacggcggcc 20004276 Query: 367 tcgcacgcaccgcacagggacaggtgccggcac 399 ||||| | | ||||||| | |||||||||||| Sbjct: 20004275 tcgcagccgcggcacaggcagaggtgccggcac 20004243 Score = 79.8 bits (40), Expect = 6e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 ||||||||||||| || |||||||||||||| |||||||||||||| | ||| ||| | Sbjct: 19949591 aggaggacatggacggaggcgttcttggtggcggcgcagacggggcaagcgtcggcggcg 19949650 Query: 364 ggctcgcacgcaccgcacagggacaggtgccggcac 399 | |||||| || ||||||||| ||||||| |||||| Sbjct: 19949651 gcctcgcaggcgccgcacaggcacaggtggcggcac 19949686
>dbj|AK120702.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170O17, full insert sequence Length = 1514 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 307 aggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggagggc 366 |||||||||||||| |||||||||||||||||||| || ||||||| ||| |||| || | Sbjct: 1132 aggacatggagcgaggcgttcttggtggccgcgcacaccgggcaggcgtcgacggcggcc 1073 Query: 367 tcgcacgcaccgcacagggacaggtgccggcac 399 ||||| | | ||||||| | |||||||||||| Sbjct: 1072 tcgcagccgcggcacaggcagaggtgccggcac 1040
>ref|XM_472374.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 951 Score = 79.8 bits (40), Expect = 6e-12 Identities = 82/96 (85%) Strand = Plus / Minus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 ||||||||||||| || |||||||||||||| |||||||||||||| | ||| ||| | Sbjct: 944 aggaggacatggacggaggcgttcttggtggcggcgcagacggggcaagcgtcggcggcg 885 Query: 364 ggctcgcacgcaccgcacagggacaggtgccggcac 399 | |||||| || ||||||||| ||||||| |||||| Sbjct: 884 gcctcgcaggcgccgcacaggcacaggtggcggcac 849
>ref|XM_466029.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1206 Score = 79.8 bits (40), Expect = 6e-12 Identities = 82/96 (85%) Strand = Plus / Minus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 |||||||| |||||||| ||||||||||||||||||||||||||||| | ||| ||| | Sbjct: 1199 aggaggacgtggagcgaggcgttcttggtggccgcgcagacggggcacgcgtcggcggcg 1140 Query: 364 ggctcgcacgcaccgcacagggacaggtgccggcac 399 | |||||| | | ||||||| | |||||||||||| Sbjct: 1139 gcctcgcagccgcggcacaggcagaggtgccggcac 1104
>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08, complete sequence Length = 106975 Score = 79.8 bits (40), Expect = 6e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 ||||||||||||| || |||||||||||||| |||||||||||||| | ||| ||| | Sbjct: 104399 aggaggacatggacggaggcgttcttggtggcggcgcagacggggcaagcgtcggcggcg 104458 Query: 364 ggctcgcacgcaccgcacagggacaggtgccggcac 399 | |||||| || ||||||||| ||||||| |||||| Sbjct: 104459 gcctcgcaggcgccgcacaggcacaggtggcggcac 104494
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 79.8 bits (40), Expect = 6e-12 Identities = 82/96 (85%) Strand = Plus / Minus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 |||||||| |||||||| ||||||||||||||||||||||||||||| | ||| ||| | Sbjct: 19187335 aggaggacgtggagcgaggcgttcttggtggccgcgcagacggggcacgcgtcggcggcg 19187276 Query: 364 ggctcgcacgcaccgcacagggacaggtgccggcac 399 | |||||| | | ||||||| | |||||||||||| Sbjct: 19187275 gcctcgcagccgcggcacaggcagaggtgccggcac 19187240 Score = 52.0 bits (26), Expect = 0.001 Identities = 77/94 (81%) Strand = Plus / Plus Query: 306 gaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggaggg 365 ||||||||||| || |||||||||||||| || ||||||||||| | ||| ||| | Sbjct: 8040206 gaggacatggacggaggcgttcttggtggcggcacagacggggcaagcgtcggcggtagc 8040265 Query: 366 ctcgcacgcaccgcacagggacaggtgccggcac 399 |||||| || || |||||| ||||||| |||||| Sbjct: 8040266 ctcgcaggcgccacacaggcacaggtggcggcac 8040299 Score = 40.1 bits (20), Expect = 5.3 Identities = 77/96 (80%) Strand = Plus / Plus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 ||||||||||||| || || ||||||||| |||||||||||||| | || |||| | Sbjct: 8260593 aggaggacatggacggaggcaatcttggtggtggcgcagacggggcaagcatcaacggcg 8260652 Query: 364 ggctcgcacgcaccgcacagggacaggtgccggcac 399 | |||||| | ||||||||| ||||| | |||||| Sbjct: 8260653 gcctcgcaggtgccgcacaggcacaggcggcggcac 8260688
>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0415B12 Length = 157419 Score = 79.8 bits (40), Expect = 6e-12 Identities = 82/96 (85%) Strand = Plus / Minus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 |||||||| |||||||| ||||||||||||||||||||||||||||| | ||| ||| | Sbjct: 85584 aggaggacgtggagcgaggcgttcttggtggccgcgcagacggggcacgcgtcggcggcg 85525 Query: 364 ggctcgcacgcaccgcacagggacaggtgccggcac 399 | |||||| | | ||||||| | |||||||||||| Sbjct: 85524 gcctcgcagccgcggcacaggcagaggtgccggcac 85489
>dbj|AK120583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136F06, full insert sequence Length = 1909 Score = 79.8 bits (40), Expect = 6e-12 Identities = 82/96 (85%) Strand = Plus / Minus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 ||||||||||||| || |||||||||||||| |||||||||||||| | ||| ||| | Sbjct: 991 aggaggacatggacggaggcgttcttggtggcggcgcagacggggcaagcgtcggcggcg 932 Query: 364 ggctcgcacgcaccgcacagggacaggtgccggcac 399 | |||||| || ||||||||| ||||||| |||||| Sbjct: 931 gcctcgcaggcgccgcacaggcacaggtggcggcac 896
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 67.9 bits (34), Expect = 2e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 301 gaaaggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacg 360 |||||||||||||||| || ||| |||||||||| ||||| |||||||| | ||| ||| Sbjct: 11143708 gaaaggaggacatggacggaggcgatcttggtggcggcgcaaacggggcaagcgtcaacg 11143649 Query: 361 gagggctcgcacgcaccgcacagggacagg 390 | || |||||| || ||||||||| ||||| Sbjct: 11143648 gcggcctcgcaggcgccgcacaggcacagg 11143619 Score = 63.9 bits (32), Expect = 4e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 ||||||||||||| || ||| |||||||||| ||||||| |||||| | ||| |||| | Sbjct: 4004983 aggaggacatggacggaggcgatcttggtggcggcgcagatggggcaagcgtcaacggcg 4005042 Query: 364 ggctcgcacgcaccgcacagggacaggtgccggcac 399 | |||||| || ||||||||| ||||| | |||||| Sbjct: 4005043 gcctcgcaggcgccgcacaggcacaggcggcggcac 4005078
>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0011G21, from chromosome 3, complete sequence Length = 142401 Score = 67.9 bits (34), Expect = 2e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 301 gaaaggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacg 360 |||||||||||||||| || ||| |||||||||| ||||| |||||||| | ||| ||| Sbjct: 57065 gaaaggaggacatggacggaggcgatcttggtggcggcgcaaacggggcaagcgtcaacg 57006 Query: 361 gagggctcgcacgcaccgcacagggacagg 390 | || |||||| || ||||||||| ||||| Sbjct: 57005 gcggcctcgcaggcgccgcacaggcacagg 56976
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 67.9 bits (34), Expect = 2e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 301 gaaaggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacg 360 |||||||||||||||| || ||| |||||||||| ||||| |||||||| | ||| ||| Sbjct: 11140471 gaaaggaggacatggacggaggcgatcttggtggcggcgcaaacggggcaagcgtcaacg 11140412 Query: 361 gagggctcgcacgcaccgcacagggacagg 390 | || |||||| || ||||||||| ||||| Sbjct: 11140411 gcggcctcgcaggcgccgcacaggcacagg 11140382 Score = 63.9 bits (32), Expect = 4e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 ||||||||||||| || ||| |||||||||| ||||||| |||||| | ||| |||| | Sbjct: 4005094 aggaggacatggacggaggcgatcttggtggcggcgcagatggggcaagcgtcaacggcg 4005153 Query: 364 ggctcgcacgcaccgcacagggacaggtgccggcac 399 | |||||| || ||||||||| ||||| | |||||| Sbjct: 4005154 gcctcgcaggcgccgcacaggcacaggcggcggcac 4005189
>dbj|AK109328.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-H11, full insert sequence Length = 768 Score = 67.9 bits (34), Expect = 2e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 301 gaaaggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacg 360 |||||||||||||||| || ||| |||||||||| ||||| |||||||| | ||| ||| Sbjct: 585 gaaaggaggacatggacggaggcgatcttggtggcggcgcaaacggggcaagcgtcaacg 526 Query: 361 gagggctcgcacgcaccgcacagggacagg 390 | || |||||| || ||||||||| ||||| Sbjct: 525 gcggcctcgcaggcgccgcacaggcacagg 496
>dbj|AK106657.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-G08, full insert sequence Length = 1516 Score = 67.9 bits (34), Expect = 2e-08 Identities = 76/90 (84%) Strand = Plus / Minus Query: 301 gaaaggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacg 360 |||||||||||||||| || ||| |||||||||| ||||| |||||||| | ||| ||| Sbjct: 721 gaaaggaggacatggacggaggcgatcttggtggcggcgcaaacggggcaagcgtcaacg 662 Query: 361 gagggctcgcacgcaccgcacagggacagg 390 | || |||||| || ||||||||| ||||| Sbjct: 661 gcggcctcgcaggcgccgcacaggcacagg 632
>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0061L19, from chromosome 3, complete sequence Length = 153322 Score = 63.9 bits (32), Expect = 4e-07 Identities = 80/96 (83%) Strand = Plus / Minus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 ||||||||||||| || ||| |||||||||| ||||||| |||||| | ||| |||| | Sbjct: 94385 aggaggacatggacggaggcgatcttggtggcggcgcagatggggcaagcgtcaacggcg 94326 Query: 364 ggctcgcacgcaccgcacagggacaggtgccggcac 399 | |||||| || ||||||||| ||||| | |||||| Sbjct: 94325 gcctcgcaggcgccgcacaggcacaggcggcggcac 94290
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 ||||||||||||| || ||| |||||||||| |||||||||||||| | ||| |||| | Sbjct: 25784466 aggaggacatggacggaggcgatcttggtggcggcgcagacggggcaagcgtcaacggcg 25784525 Query: 364 ggctcgcacgcaccgcacagggacagg 390 | |||| | || ||||||||| ||||| Sbjct: 25784526 gcctcgtaggcgccgcacaggcacagg 25784552
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 ||||||||||||| || ||| |||||||||| |||||||||||||| | ||| |||| | Sbjct: 25712642 aggaggacatggacggaggcgatcttggtggcggcgcagacggggcaagcgtcaacggcg 25712701 Query: 364 ggctcgcacgcaccgcacagggacagg 390 | |||| | || ||||||||| ||||| Sbjct: 25712702 gcctcgtaggcgccgcacaggcacagg 25712728
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 ||||||||||||| || ||| |||||||||| |||||||||||||| | ||| |||| | Sbjct: 5917 aggaggacatggacggaggcgatcttggtggcggcgcagacggggcaagcgtcaacggcg 5976 Query: 364 ggctcgcacgcaccgcacagggacagg 390 | |||| | || ||||||||| ||||| Sbjct: 5977 gcctcgtaggcgccgcacaggcacagg 6003
>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167131 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 ||||||||||||| || ||| |||||||||| |||||||||||||| | ||| |||| | Sbjct: 151704 aggaggacatggacggaggcgatcttggtggcggcgcagacggggcaagcgtcaacggcg 151763 Query: 364 ggctcgcacgcaccgcacagggacagg 390 | |||| | || ||||||||| ||||| Sbjct: 151764 gcctcgtaggcgccgcacaggcacagg 151790
>ref|XM_479778.1| Oryza sativa (japonica cultivar-group), mRNA Length = 678 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggca 350 ||||||||||||| || |||||||||||||| | |||||||||||| Sbjct: 671 aggaggacatggacagaggcgttcttggtggcggtgcagacggggca 625
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggca 350 ||||||||||||| || |||||||||||||| | |||||||||||| Sbjct: 818672 aggaggacatggacagaggcgttcttggtggcggtgcagacggggca 818718
>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0427G12 Length = 185545 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggca 350 ||||||||||||| || |||||||||||||| | |||||||||||| Sbjct: 117892 aggaggacatggacagaggcgttcttggtggcggtgcagacggggca 117938
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 52.0 bits (26), Expect = 0.001 Identities = 77/94 (81%) Strand = Plus / Plus Query: 306 gaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggaggg 365 ||||||||||| || |||||||||||||| || ||||||||||| | ||| ||| | Sbjct: 28399 gaggacatggacggaggcgttcttggtggcggcacagacggggcaagcgtcggcggtagc 28458 Query: 366 ctcgcacgcaccgcacagggacaggtgccggcac 399 |||||| || || |||||| ||||||| |||||| Sbjct: 28459 ctcgcaggcgccacacaggcacaggtggcggcac 28492
>gb|AC098588.3| Homo sapiens BAC clone RP11-291L15 from 4, complete sequence Length = 214945 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 177 atgcagcaaaaacaaaaacaaata 200 |||||||||||||||||||||||| Sbjct: 181157 atgcagcaaaaacaaaaacaaata 181134
>gb|AC098713.4| Mus musculus BAC clone RP23-2C16 from 5, complete sequence Length = 217286 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Minus Query: 176 catgcagcaaaaacaaaaacaaa 198 ||||||||||||||||||||||| Sbjct: 65646 catgcagcaaaaacaaaaacaaa 65624
>gb|AC118467.37| Mus musculus strain C57BL/6J clone rp23-430i3, complete sequence Length = 204699 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Plus Query: 176 catgcagcaaaaacaaaaacaaa 198 ||||||||||||||||||||||| Sbjct: 78518 catgcagcaaaaacaaaaacaaa 78540
>gb|AC097366.6| Genomic sequence for Mus musculus, clone RP23-81M23, from chromosome 17, complete sequence Length = 183518 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Minus Query: 176 catgcagcaaaaacaaaaacaaa 198 ||||||||||||||||||||||| Sbjct: 144761 catgcagcaaaaacaaaaacaaa 144739
>emb|BX649630.9| Zebrafish DNA sequence from clone DKEY-125B7 in linkage group 21, complete sequence Length = 124133 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Plus Query: 176 catgcagcaaaaacaaaaacaaa 198 ||||||||||||||||||||||| Sbjct: 89394 catgcagcaaaaacaaaaacaaa 89416
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.086 Identities = 32/35 (91%) Strand = Plus / Minus Query: 324 gttcttggtggccgcgcagacggggcaggtgtcca 358 ||||| ||||||| ||| ||||||||||||||||| Sbjct: 179828 gttctgggtggccacgccgacggggcaggtgtcca 179794
>emb|BX005111.4| Zebrafish DNA sequence from clone CH211-273E17 in linkage group 21, complete sequence Length = 169747 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Minus Query: 176 catgcagcaaaaacaaaaacaaa 198 ||||||||||||||||||||||| Sbjct: 85530 catgcagcaaaaacaaaaacaaa 85508
>gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16, complete sequence Length = 175425 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 366 ctcgcacgcaccgcacagggacaggtgccggcac 399 ||||||||| | ||||||| |||||||||||||| Sbjct: 39988 ctcgcacgccctgcacaggcacaggtgccggcac 40021
>emb|AL451138.5| Human DNA sequence from clone RP11-152H3 on chromosome 9, complete sequence Length = 117273 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 caatctacctaaaaataatttaaaaa 92 |||| ||||||||||||||||||||| Sbjct: 96977 caatttacctaaaaataatttaaaaa 97002
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 366 ctcgcacgcaccgcacagggacaggtgccggcac 399 ||||||||| | ||||||| |||||||||||||| Sbjct: 19171200 ctcgcacgccctgcacaggcacaggtgccggcac 19171233
>gb|AC092633.2| Homo sapiens BAC clone RP11-339P1 from 2, complete sequence Length = 135863 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 177 atgcagcaaaaacaaaaacaaatatt 202 |||||||||||||||||| ||||||| Sbjct: 72436 atgcagcaaaaacaaaaataaatatt 72411
>gb|AC012366.10| Homo sapiens BAC clone RP11-466M21 from 2, complete sequence Length = 197775 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 atgcagcaaaaacaaaaacaaa 198 |||||||||||||||||||||| Sbjct: 17288 atgcagcaaaaacaaaaacaaa 17267
>gb|AC084414.2|AC084414 Arabidopsis thaliana chromosome 1 BAC F27K7 genomic sequence, complete sequence Length = 54313 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 183 caaaaacaaaaacaaatattgg 204 |||||||||||||||||||||| Sbjct: 29102 caaaaacaaaaacaaatattgg 29081
>gb|AC108005.8| Homo sapiens chromosome 11, clone CTD-2515M10, complete sequence Length = 165443 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 atgcagcaaaaacaaaaacaaa 198 |||||||||||||||||||||| Sbjct: 93433 atgcagcaaaaacaaaaacaaa 93454
>gb|AC154341.2| Mus musculus BAC clone RP23-240C2 from 16, complete sequence Length = 163871 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 acatgcagcaaaaacaaaaacaaata 200 |||| ||||||||||||||||||||| Sbjct: 141827 acattcagcaaaaacaaaaacaaata 141852
>emb|AL391703.9| Human DNA sequence from clone RP11-422P8 on chromosome 1 Contains the 5' end of the GNG12 gene for guanine nucleotide binding protein (G protein), gamma 12, the 5' end of a novel gene (FLJ38762, FLJ42034) and a CpG island, complete sequence Length = 191741 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 atgcagcaaaaacaaaaacaaa 198 |||||||||||||||||||||| Sbjct: 39600 atgcagcaaaaacaaaaacaaa 39621
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 366 ctcgcacgcaccgcacagggacaggtgccggcac 399 ||||||||| | ||||||| |||||||||||||| Sbjct: 19330749 ctcgcacgccctgcacaggcacaggtgccggcac 19330782
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 gacgacgacgtgctcgaccgc 238 ||||||||||||||||||||| Sbjct: 925734 gacgacgacgtgctcgaccgc 925714
>gb|AC005361.1| Homo sapiens chromosome 16, cosmid clone 352F10 (LANL), complete sequence Length = 35677 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 caaaaacaaaaacaaatattg 203 ||||||||||||||||||||| Sbjct: 26741 caaaaacaaaaacaaatattg 26721
>gb|AC147027.4| Pan troglodytes BAC clone RP43-92F2 from 7, complete sequence Length = 162023 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 agcaaaaacaaaaacaaatat 201 ||||||||||||||||||||| Sbjct: 7663 agcaaaaacaaaaacaaatat 7683
>gb|AC161021.4| Pan troglodytes BAC clone CH251-2N24 from chromosome 7, complete sequence Length = 187139 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 agcaaaaacaaaaacaaatat 201 ||||||||||||||||||||| Sbjct: 49567 agcaaaaacaaaaacaaatat 49587
>gb|AC161126.3| Pan troglodytes BAC clone CH251-595C13 from chromosome 7, complete sequence Length = 187683 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 agcaaaaacaaaaacaaatat 201 ||||||||||||||||||||| Sbjct: 130327 agcaaaaacaaaaacaaatat 130347
>gb|AC148920.1| Mus musculus BAC clone RP23-273O10 from chromosome 19, complete sequence Length = 224526 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 agcaaaaacaaaaacaaatat 201 ||||||||||||||||||||| Sbjct: 93533 agcaaaaacaaaaacaaatat 93513
>gb|AC092117.4| Homo sapiens chromosome 16 clone CTD-2270P14, complete sequence Length = 211606 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 caaaaacaaaaacaaatattg 203 ||||||||||||||||||||| Sbjct: 204039 caaaaacaaaaacaaatattg 204059
>gb|AC126242.3| Mus musculus BAC clone RP24-249E21 from chromosome 10, complete sequence Length = 177581 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 agcaaaaacaaaaacaaatat 201 ||||||||||||||||||||| Sbjct: 132460 agcaaaaacaaaaacaaatat 132440
>gb|AC146046.3| Pan troglodytes BAC clone RP43-14H10 from 7, complete sequence Length = 155456 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 agcaaaaacaaaaacaaatat 201 ||||||||||||||||||||| Sbjct: 85727 agcaaaaacaaaaacaaatat 85747
>gb|AC000058.1| Homo sapiens BAC clone CTB-111F10 from 7, complete sequence Length = 46419 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 agcaaaaacaaaaacaaatat 201 ||||||||||||||||||||| Sbjct: 14737 agcaaaaacaaaaacaaatat 14757
>gb|AC151425.22| Medicago truncatula clone mth2-4l6, complete sequence Length = 122088 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 taaaaataatttaaaaaagtc 96 ||||||||||||||||||||| Sbjct: 114883 taaaaataatttaaaaaagtc 114863
>emb|AL606923.8| Human DNA sequence from clone RP11-361F19 on chromosome 6 Contains a C2H2 zinc finger protein pseudogene, complete sequence Length = 154285 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 agcaaaaacaaaaacaaatat 201 ||||||||||||||||||||| Sbjct: 145548 agcaaaaacaaaaacaaatat 145528
>emb|AL355332.8| Human DNA sequence from clone RP11-390F23 on chromosome 10 Contains a CpG island, complete sequence Length = 182997 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 caaaaacaaaaacaaatattggaga 207 |||||||||||||| |||||||||| Sbjct: 121258 caaaaacaaaaacagatattggaga 121234
>gb|AC010184.18| Homo sapiens 3 BAC RP11-438D8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 190580 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 caaaaacaaaaacaaatattg 203 ||||||||||||||||||||| Sbjct: 127913 caaaaacaaaaacaaatattg 127933
>emb|AL133551.13| Human DNA sequence from clone RP11-57G10 on chromosome 10 Contains a ribosomal protein L21 (RPL21) pseudogene, the gene for J-domain containing protein 1 (JDP1), a ribosomal protein L12 (RPL12) pseudogene, a novel pseudogene, the SIRT1 gene for sirtuin (silent mating type information regulation 2 homolog) 1 (S. cerevisiae), the 3' end of the gene for a novel protein (KIAA0032) and two CpG island, complete sequence Length = 175940 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 caaaaacaaaaacaaatattg 203 ||||||||||||||||||||| Sbjct: 149848 caaaaacaaaaacaaatattg 149828
>emb|BX511100.26| Zebrafish DNA sequence from clone CH211-57M13 in linkage group 12, complete sequence Length = 169592 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 184 aaaaacaaaaacaaatattggagaa 208 ||||||||||||||||||| ||||| Sbjct: 11304 aaaaacaaaaacaaatatttgagaa 11280
>gb|AC090799.2| Homo sapiens chromosome 11, clone RP11-242N18, complete sequence Length = 155803 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 aatctacctaaaaataattta 88 ||||||||||||||||||||| Sbjct: 61798 aatctacctaaaaataattta 61818
>gb|AC113614.4| Homo sapiens BAC clone RP11-559P10 from 4, complete sequence Length = 103585 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 caaaaacaaaaacaaatattg 203 ||||||||||||||||||||| Sbjct: 25838 caaaaacaaaaacaaatattg 25858
>gb|AC023301.5| Homo sapiens chromosome 18, clone RP11-713C5, complete sequence Length = 167190 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 tgcaaactccagcatttggac 128 ||||||||||||||||||||| Sbjct: 25314 tgcaaactccagcatttggac 25334
>gb|AC091138.6| Homo sapiens chromosome 18, clone RP11-676J15, complete sequence Length = 207520 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 tgcaaactccagcatttggac 128 ||||||||||||||||||||| Sbjct: 82181 tgcaaactccagcatttggac 82161
>gb|DP000052.1| Sus scrofa target 126 genomic scaffold Length = 432382 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 78 aaaataatttaaaaaagtctaggat 102 ||||||||| ||||||||||||||| Sbjct: 292284 aaaataattgaaaaaagtctaggat 292308
>gb|AC153014.4| Mus musculus BAC clone RP23-203I6 from chromosome 19, complete sequence Length = 195382 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 agcaaaaacaaaaacaaatat 201 ||||||||||||||||||||| Sbjct: 135524 agcaaaaacaaaaacaaatat 135504
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 gcaaaaacaaaaacaaatatt 202 ||||||||||||||||||||| Sbjct: 34734242 gcaaaaacaaaaacaaatatt 34734222 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tacctaaaaataatttaaaaa 92 ||||||||||||||||||||| Sbjct: 1134276 tacctaaaaataatttaaaaa 1134256
>gb|AC007472.6|AC007472 Drosophila melanogaster, chromosome 2R, region 49E-49F, BAC clone BACR30D19, complete sequence Length = 163052 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 gcaaaaacaaaaacaaatatt 202 ||||||||||||||||||||| Sbjct: 68279 gcaaaaacaaaaacaaatatt 68299
>dbj|AP003411.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1148D12 Length = 132060 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 gcaaaaacaaaaacaaatatt 202 ||||||||||||||||||||| Sbjct: 49482 gcaaaaacaaaaacaaatatt 49462
>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A04 Length = 141079 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tacctaaaaataatttaaaaa 92 ||||||||||||||||||||| Sbjct: 103590 tacctaaaaataatttaaaaa 103570
>gb|AC107648.11| Mus musculus chromosome 19, clone RP23-126M4, complete sequence Length = 210931 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 agcaaaaacaaaaacaaatat 201 ||||||||||||||||||||| Sbjct: 135524 agcaaaaacaaaaacaaatat 135504
>emb|BX255894.19| Zebrafish DNA sequence from clone CH211-251G8 in linkage group 19, complete sequence Length = 180950 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 agcaaaaacaaaaacaaatat 201 ||||||||||||||||||||| Sbjct: 69177 agcaaaaacaaaaacaaatat 69197
>gb|AE003820.3| Drosophila melanogaster chromosome 2R, section 30 of 73 of the complete sequence Length = 263912 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 gcaaaaacaaaaacaaatatt 202 ||||||||||||||||||||| Sbjct: 137491 gcaaaaacaaaaacaaatatt 137511
>dbj|AP003025.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-217L21, complete sequence Length = 193828 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 aaaaacaaaaacaaatattggagaa 208 ||||| ||||||||||||||||||| Sbjct: 21176 aaaaaaaaaaacaaatattggagaa 21200
>gb|AC092856.26| Mus musculus strain C57BL/6J chromosome 10 clone rp23-7p15, complete sequence Length = 221799 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 agcaaaaacaaaaacaaatat 201 ||||||||||||||||||||| Sbjct: 70558 agcaaaaacaaaaacaaatat 70578
>gb|DQ278604.1| Homo sapiens sirtuin (silent mating type information regulation 2 homolog) 1 (S. cerevisiae) (SIRT1) gene, complete cds Length = 36853 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 caaaaacaaaaacaaatattg 203 ||||||||||||||||||||| Sbjct: 18478 caaaaacaaaaacaaatattg 18458
>emb|AL591404.4| Mouse DNA sequence from clone RP23-394O9 on chromosome 11, complete sequence Length = 203613 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 174 cacatgcagcaaaaacaaaaacaaa 198 ||||||||| ||||||||||||||| Sbjct: 158021 cacatgcaggaaaaacaaaaacaaa 157997
>emb|AL772323.8| Mouse DNA sequence from clone RP23-370F9 on chromosome 2, complete sequence Length = 212243 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 caaaaacaaaaacaaatattg 203 ||||||||||||||||||||| Sbjct: 151268 caaaaacaaaaacaaatattg 151288
>emb|AL845174.4| Mouse DNA sequence from clone RP23-156P22 on chromosome 2, complete sequence Length = 216475 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 caaaaacaaaaacaaatattg 203 ||||||||||||||||||||| Sbjct: 80055 caaaaacaaaaacaaatattg 80075
>emb|AL358338.3|CNS05TE9 Human chromosome 14 DNA sequence BAC C-2082C19 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 138225 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 177 atgcagcaaaaacaaaaacaaatat 201 ||||| ||||||||||||||||||| Sbjct: 27545 atgcaacaaaaacaaaaacaaatat 27569
>emb|AL732495.11| Mouse DNA sequence from clone RP23-76E19 on chromosome 2, complete sequence Length = 164199 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 agcaaaaacaaaaacaaatat 201 ||||||||||||||||||||| Sbjct: 63759 agcaaaaacaaaaacaaatat 63779
>dbj|AB047953.1| Macaca fascicularis brain cDNA, clone:QnpA-12617 Length = 1891 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 tgcagcaaaaacaaaaacaaa 198 ||||||||||||||||||||| Sbjct: 569 tgcagcaaaaacaaaaacaaa 549
>ref|XM_635427.1| Dictyostelium discoideum hypothetical protein (DDB0220032), partial mRNA Length = 5121 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agcaaaaacaaaaacaaata 200 |||||||||||||||||||| Sbjct: 5101 agcaaaaacaaaaacaaata 5120
>gb|AC169520.2| Mus musculus BAC clone RP23-35C6 from chromosome 19, complete sequence Length = 209374 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 203521 caaaaacaaaaacaaatatt 203540
>gb|DQ058416.1| Rhizobium etli strain 8C-3 plasmid clone REB02, partial sequence Length = 190912 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 cgacgacgtgctcgaccgcg 239 |||||||||||||||||||| Sbjct: 174915 cgacgacgtgctcgaccgcg 174934
>ref|XM_464799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 40.1 bits (20), Expect = 5.3 Identities = 77/96 (80%) Strand = Plus / Minus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 ||||||||||||| || || ||||||||| |||||||||||||| | || |||| | Sbjct: 410 aggaggacatggacggaggcaatcttggtggtggcgcagacggggcaagcatcaacggcg 351 Query: 364 ggctcgcacgcaccgcacagggacaggtgccggcac 399 | |||||| | ||||||||| ||||| | |||||| Sbjct: 350 gcctcgcaggtgccgcacaggcacaggcggcggcac 315
>gb|AC169699.1| Rhesus Macaque BAC CH250-12P18 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 209387 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 atgcagcaaaaacaaaaacaaata 200 |||||||||||||||||| ||||| Sbjct: 57856 atgcagcaaaaacaaaaataaata 57833
>gb|AF061032.1| Homo sapiens cosmid 223D9 from Xq28, complete sequence Length = 37581 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cctaaaaataatttaaaaaa 93 |||||||||||||||||||| Sbjct: 16863 cctaaaaataatttaaaaaa 16882
>gb|AF356652.1| Filobasidiella neoformans var. neoformans 5S ribosomal RNA, 17S ribosomal RNA genes, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 25S ribosomal RNA gene, complete sequence Length = 8275 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 1706 acatgctgcaaaaacaaaaacaaa 1683
>gb|AC166063.4| Mus musculus BAC clone RP23-21L22 from chromosome 19, complete sequence Length = 232698 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 58734 caaaaacaaaaacaaatatt 58715
>gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's Hospital Oakland Research Institute) complete sequence Length = 237425 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 tgcagcaaaaacaaaaacaa 197 |||||||||||||||||||| Sbjct: 546 tgcagcaaaaacaaaaacaa 527
>gb|AC011249.7| Drosophila melanogaster clone BACR37F23, complete sequence Length = 164973 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 agcaaaaacaaaaacaaatattgg 204 ||||||||||| |||||||||||| Sbjct: 36888 agcaaaaacaataacaaatattgg 36911
>gb|AC125254.9| Mus musculus chromosome 9, clone RP24-156I15, complete sequence Length = 161503 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cctaaaaataatttaaaaaa 93 |||||||||||||||||||| Sbjct: 70322 cctaaaaataatttaaaaaa 70341
>gb|AY810109.1| Schistosoma japonicum SJCHGC09382 protein mRNA, partial cds Length = 1695 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gagaacacgacaacgacgacgacg 227 ||||||||||| |||||||||||| Sbjct: 1221 gagaacacgacgacgacgacgacg 1198
>gb|AC158527.2| Mus musculus BAC clone RP23-266E16 from chromosome 12, complete sequence Length = 218736 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 16516 caaaaacaaaaacaaatatt 16497
>emb|CT025632.2| Pan troglodytes chromosome X clone PTB-029A18 map Xq28, complete sequence Length = 144091 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cctaaaaataatttaaaaaa 93 |||||||||||||||||||| Sbjct: 132480 cctaaaaataatttaaaaaa 132499
>ref|XM_746755.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g09780) partial mRNA Length = 360 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 acgacaacgacgacgacgtg 229 |||||||||||||||||||| Sbjct: 203 acgacaacgacgacgacgtg 184
>gb|AC122324.4| Mus musculus BAC clone RP23-333I5 from chromosome 3, complete sequence Length = 243378 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 cagcaaaaacaaaaacaaat 199 |||||||||||||||||||| Sbjct: 89327 cagcaaaaacaaaaacaaat 89346
>gb|AC006972.2| Homo sapiens PAC clone RP4-799O8 from 7, complete sequence Length = 171537 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 atggtcaagaaaggaggaca 312 |||||||||||||||||||| Sbjct: 171473 atggtcaagaaaggaggaca 171492
>gb|AC146192.2| Pan troglodytes BAC clone RP43-35D13 from 7, complete sequence Length = 178260 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agcaaaaacaaaaacaaata 200 |||||||||||||||||||| Sbjct: 97796 agcaaaaacaaaaacaaata 97815
>gb|AC146202.3| Pan troglodytes BAC clone RP43-35A11 from 7, complete sequence Length = 161532 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 atggtcaagaaaggaggaca 312 |||||||||||||||||||| Sbjct: 155068 atggtcaagaaaggaggaca 155087
>gb|AC162919.5| Mus musculus BAC clone RP23-365O8 from chromosome 6, complete sequence Length = 193362 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 91722 caaaaacaaaaacaaatatt 91741
>emb|BX957326.8| Zebrafish DNA sequence from clone DKEY-31B16 in linkage group 23, complete sequence Length = 259092 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aaaaacaaaaacaaatattg 203 |||||||||||||||||||| Sbjct: 48085 aaaaacaaaaacaaatattg 48066
>gb|AC182767.3| Pan troglodytes BAC clone CH251-283B24 from chromosome 7, complete sequence Length = 155153 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aaaaacaaaaacaaatattg 203 |||||||||||||||||||| Sbjct: 71853 aaaaacaaaaacaaatattg 71834
>emb|Z98048.1|HS408N23 Human DNA sequence from clone RP3-408N23 on chromosome 22q13, complete sequence Length = 97916 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 agcaaaaacaaaaacaaata 200 |||||||||||||||||||| Sbjct: 90101 agcaaaaacaaaaacaaata 90082
>emb|AL591499.7| Human DNA sequence from clone RP11-15G8 on chromosome 6 Contains the 5' end of a novel gene (KIAA1116), a stathmin-like 2 (Superiorcervical ganglia, neural specific 10 superior cervical ganglia, neural specific 10 neuronal growth-associated protein (silencer) (STMN2) (SCG10, SGC10, SCGN10) pseudogene and two CpG islands, complete sequence Length = 111864 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 aaaaacaaaaacaaatattggaga 207 ||||| |||||||||||||||||| Sbjct: 28593 aaaaataaaaacaaatattggaga 28570
>emb|AL513220.9| Human DNA sequence from clone RP11-566C13 on chromosome 1 Contains the 5' end of the gene for nucleolar GTPase (HUMAUANTIG), the gene for a novel protein (FLJ40906) and a CpG island, complete sequence Length = 94638 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 aaaaacaaaaacaaatattg 203 |||||||||||||||||||| Sbjct: 67442 aaaaacaaaaacaaatattg 67461
>emb|AL365190.16| Human DNA sequence from clone RP11-512H14 on chromosome 9 Contains the 5' end of the TLE1 gene for transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) (ESG, GRG1), the 5' end of a novel gene and two CpG isalnds, complete sequence Length = 89468 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 tctacctaaaaataatttaaaaaa 93 |||||| ||||||||||||||||| Sbjct: 52636 tctaccaaaaaataatttaaaaaa 52659
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced Length = 1285452 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 tctacctaaaaataatttaaaaaa 93 |||||| ||||||||||||||||| Sbjct: 601467 tctaccaaaaaataatttaaaaaa 601490
>emb|AL355375.17| Human DNA sequence from clone RP11-448N11 on chromosome 6 Contains a dihydrofolate reductase (DHFR) pseudogene and a ribosomal protein S17 (RPS17) pseudogene, complete sequence Length = 203501 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 60604 caaaaacaaaaacaaatatt 60623
>emb|AL353733.14| Human DNA sequence from clone RP11-143N16 on chromosome 9, complete sequence Length = 95442 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 gcagcaaaaacaaaaacaaa 198 |||||||||||||||||||| Sbjct: 60616 gcagcaaaaacaaaaacaaa 60635
>emb|AL158212.15| Human DNA sequence from clone RP11-57H14 on chromosome 10 Contains the 5' end of the TCF7L2 gene for transcription factor 7-like 2 (T-cell specific, HMG-box), two novel genes and two CpG islands, complete sequence Length = 166464 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ccacatgcagcaaaaacaaa 192 |||||||||||||||||||| Sbjct: 161137 ccacatgcagcaaaaacaaa 161156
>emb|AL138887.13| Human DNA sequence from clone RP3-383A10 on chromosome 6, complete sequence Length = 29927 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tacctaaaaataatttaaaa 91 |||||||||||||||||||| Sbjct: 1062 tacctaaaaataatttaaaa 1043
>emb|AL137021.15| Human DNA sequence from clone RP11-202A15 on chromosome 9q31.1-32, complete sequence Length = 80658 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 agcaaaaacaaaaacaaata 200 |||||||||||||||||||| Sbjct: 21193 agcaaaaacaaaaacaaata 21174
>gb|AC024382.7| Homo sapiens chromosome 8, clone RP11-351C8, complete sequence Length = 193599 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 atgcagcaaaaacaaaaacaaata 200 ||||| |||||||||||||||||| Sbjct: 55471 atgcaacaaaaacaaaaacaaata 55448
>emb|AL121908.16|HSDJ719C8 Human DNA sequence from clone RP4-719C8 on chromosome 20 Contains three different 5' ends of the C20orf101 gene and three CpG islands, complete sequence Length = 150985 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 gtcaagaaaggaggacatgg 315 |||||||||||||||||||| Sbjct: 3598 gtcaagaaaggaggacatgg 3617
>emb|AL121924.13|HSJ746J20 Human DNA sequence from clone RP4-746J20 on chromosome 20 Contains the 5' end of the C20orf30 gene for HSPC274 protein, the PCNA gene for proliferating cell nuclear antigen, the 5' end of the CDS2 gene for CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 and three CpG islands, complete sequence Length = 65054 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 183 caaaaacaaaaacaaatattggagaaca 210 |||||||||||||| || |||||||||| Sbjct: 20961 caaaaacaaaaacatattttggagaaca 20988
>emb|AL049550.5|HSDJ90L14 Human DNA sequence from clone RP1-90L14 on chromosome 6q14.1-15 Contains the 3' end of a novel gene, complete sequence Length = 104594 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 atgcagcaaaaacaaaaacaaata 200 |||||||||||||||||| ||||| Sbjct: 41842 atgcagcaaaaacaaaaataaata 41819
>emb|AL035456.26|HS1099D15 Human DNA sequence from clone RP5-1099D15 on chromosome 20 Contains the 3' end of a novel gene, the JAG1 gene encoding Jagged 1 (involved in Alagille syndrome), a pseudogene aimilar to DNAJ protein, a CpG island, ESTs, STSs and GSSs, complete sequence Length = 125952 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agcaaaaacaaaaacaaata 200 |||||||||||||||||||| Sbjct: 44954 agcaaaaacaaaaacaaata 44973
>emb|AL022157.1|HS323P24 Human DNA sequence from clone RP3-323P24 on chromosome Xp11.21-11.23 Contains the gene for spindlin-like protein 2 (SPIN2), the gene for a novel protein similar to SPIN2 and a novel gene, complete sequence Length = 80611 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 atgcagcaaaaacaaaaacaaata 200 |||||||||||||||||| ||||| Sbjct: 72988 atgcagcaaaaacaaaaataaata 73011
>emb|X84374.3|SCARD1GN Saccharothrix mutabilis subsp. capreolus A201A biosynthetic gene cluster Length = 33676 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cgacgacgacgtgctcgacc 236 |||||||||||||||||||| Sbjct: 21085 cgacgacgacgtgctcgacc 21104
>gb|AC011848.11| Homo sapiens chromosome 17, clone RP11-354C22, complete sequence Length = 163577 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 agcaaaaacaaaaacaaata 200 |||||||||||||||||||| Sbjct: 31357 agcaaaaacaaaaacaaata 31338
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 gacgacgacgtgctcgaccg 237 |||||||||||||||||||| Sbjct: 171994 gacgacgacgtgctcgaccg 171975
>emb|AL606480.11| Mouse DNA sequence from clone RP23-112C19 on chromosome 11 Contains the 3' end of the Col1a1 gene for procollagen type I alpha 1, the Sgca gene for alpha sarcoglycan (dystrophin-associated glycoprotein), the Hils1 gene for histone H1-like protein in spermatids 1, the Ppp1r9b gene for protein phosphatase 1 regulatory subunit 9B, a novel gene (A930041A10Rik, B930032I08Rik, C530046K03Rik), the Pdk2 gene for pyruvate dehydrogenase kinase isoenzyme 2, a novel gene, the Itga3 gene for integrin alpha 3, the Dlx3 gene for distal-less homeobox 3 and three CpG islands, complete sequence Length = 186276 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 gcagcaaaaacaaaaacaaa 198 |||||||||||||||||||| Sbjct: 38544 gcagcaaaaacaaaaacaaa 38563
>emb|AJ271405.1|SRO271405 Streptomyces rochei sttO gene, sttN gene, sttM gene, sttL gene, sttK gene, sttJ gene, sttI gene, sttH gene, sttG gene, sttF gene and sttE gene, strain F20 Length = 13339 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 cacgacaacgacgacgacgt 228 |||||||||||||||||||| Sbjct: 8691 cacgacaacgacgacgacgt 8710
>emb|CR847797.8| Zebrafish DNA sequence from clone DKEY-281F2 in linkage group 8, complete sequence Length = 219913 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 taaaaataatttaaaaaagt 95 |||||||||||||||||||| Sbjct: 531 taaaaataatttaaaaaagt 550
>emb|BX927082.9| Zebrafish DNA sequence from clone DKEY-182O15 in linkage group 13, complete sequence Length = 157140 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 acctaaaaataatttaaaaa 92 |||||||||||||||||||| Sbjct: 21101 acctaaaaataatttaaaaa 21120
>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3, complete sequence Length = 241961 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 141424 caaaaacaaaaacaaatatt 141443
>gb|AC155256.2| Mus musculus BAC clone RP24-142I9 from chromosome 12, complete sequence Length = 163949 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agcaaaaacaaaaacaaata 200 |||||||||||||||||||| Sbjct: 57864 agcaaaaacaaaaacaaata 57883
>gb|AC160827.2| Xenopus tropicalis clone ISB1-217F24, complete sequence Length = 29754 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 gcagcaaaaacaaaaacaaa 198 |||||||||||||||||||| Sbjct: 3781 gcagcaaaaacaaaaacaaa 3800
>gb|AC116099.2| Homo sapiens chromosome 1 clone RP11-338F23, complete sequence Length = 184007 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 atggtcaagaaaggaggaca 312 |||||||||||||||||||| Sbjct: 181572 atggtcaagaaaggaggaca 181591
>gb|AC021657.19| Homo sapiens 3 BAC RP11-490B19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170046 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 acctaaaaataatttaaaaa 92 |||||||||||||||||||| Sbjct: 8192 acctaaaaataatttaaaaa 8211
>emb|CR628311.1| Human DNA sequence from clone XX-NCIH2171_5AD01, complete sequence Length = 114317 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 atgcagcaaaaacaaaaacaaata 200 ||||| |||||||||||||||||| Sbjct: 60671 atgcaacaaaaacaaaaacaaata 60694
>gb|AC148314.3| Pan troglodytes BAC clone CH251-527C13 from chromosome 7, complete sequence Length = 172090 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 atggtcaagaaaggaggaca 312 |||||||||||||||||||| Sbjct: 70880 atggtcaagaaaggaggaca 70899
>dbj|AK091045.1| Homo sapiens cDNA FLJ33726 fis, clone BRAWH2017407, highly similar to PHOSPHATIDATE CYTIDYLYLTRANSFERASE 2 (EC 2.7.7.41) Length = 2676 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 183 caaaaacaaaaacaaatattggagaaca 210 |||||||||||||| || |||||||||| Sbjct: 559 caaaaacaaaaacatattttggagaaca 586
>gb|AC024289.7| Homo sapiens chromosome , clone RP11-23D13, complete sequence Length = 78746 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 aaaaacaaaaacaaatattg 203 |||||||||||||||||||| Sbjct: 62503 aaaaacaaaaacaaatattg 62522
>gb|AE012010.1| Xanthomonas axonopodis pv. citri str. 306, section 388 of 469 of the complete genome Length = 10750 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 acgacgacgtgctcgaccgc 238 |||||||||||||||||||| Sbjct: 3669 acgacgacgtgctcgaccgc 3650
>gb|AC114486.2| Homo sapiens chromosome 1 clone RP11-371A23, complete sequence Length = 179070 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 58126 caaaaacaaaaacaaatatt 58145
>gb|AC099052.2| Homo sapiens chromosome 3 clone RP11-437M11, complete sequence Length = 139280 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 atgcagcaaaaacaaaaacaaata 200 ||||| |||||||||||||||||| Sbjct: 3504 atgcaacaaaaacaaaaacaaata 3527
>gb|AC004521.3| Arabidopsis thaliana chromosome 2 clone F4I1 map m336, complete sequence Length = 118327 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 tgcagcaaaaacaaaaacaa 197 |||||||||||||||||||| Sbjct: 50253 tgcagcaaaaacaaaaacaa 50272
>dbj|AB183488.1| Oryzias latipes DNA, MHC class I region Length = 540982 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 taaaaataatttaaaaaagt 95 |||||||||||||||||||| Sbjct: 111994 taaaaataatttaaaaaagt 111975
>gb|AC007003.5| Homo sapiens BAC clone RP11-506L7 from 7, complete sequence Length = 34087 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 atggtcaagaaaggaggaca 312 |||||||||||||||||||| Sbjct: 136 atggtcaagaaaggaggaca 155
>gb|AC009835.14| Homo sapiens chromosome 18, clone RP11-413I9, complete sequence Length = 157979 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 atgcagcaaaaacaaaaacaaata 200 |||||||||||||||||| ||||| Sbjct: 8445 atgcagcaaaaacaaaaataaata 8422
>gb|AC093827.3| Homo sapiens BAC clone RP11-397E7 from 4, complete sequence Length = 192263 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gttggatggtcaagaaagga 307 |||||||||||||||||||| Sbjct: 69042 gttggatggtcaagaaagga 69061
>gb|U80928.5|REU80928 Rhizobium etli strain CFN42 symbiotic plasmid p42d, complete sequence Length = 371254 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 cgacgacgtgctcgaccgcg 239 |||||||||||||||||||| Sbjct: 23024 cgacgacgtgctcgaccgcg 23005
>gb|AC092841.4| Homo sapiens BAC clone RP11-270F13 from 2, complete sequence Length = 117962 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aaaaacaaaaacaaatattg 203 |||||||||||||||||||| Sbjct: 11965 aaaaacaaaaacaaatattg 11946
>gb|AC022878.8| Homo sapiens chromosome 11, clone RP11-413N13, complete sequence Length = 179652 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 14829 caaaaacaaaaacaaatatt 14810
>gb|AC013762.6| Homo sapiens, clone RP11-2I1, complete sequence Length = 144048 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 106775 caaaaacaaaaacaaatatt 106756
>gb|AC022833.5| Homo sapiens chromosome , clone RP11-147C21, complete sequence Length = 177019 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 tctacctaaaaataatttaaaaaa 93 |||||| ||||||||||||||||| Sbjct: 19725 tctaccaaaaaataatttaaaaaa 19702
>gb|AC021909.7| Homo sapiens, clone RP11-22F19, complete sequence Length = 178621 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 tctacctaaaaataatttaaaaaa 93 |||||| ||||||||||||||||| Sbjct: 65642 tctaccaaaaaataatttaaaaaa 65665
>gb|AC091928.3| Homo sapiens chromosome 5 clone RP11-292F10, complete sequence Length = 200923 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 atgcagcaaaaacaaaaacaaata 200 ||||| |||||||||||||||||| Sbjct: 135948 atgcaacaaaaacaaaaacaaata 135971
>gb|AC164657.4| Pan troglodytes BAC clone CH251-389C15 from chromosome unknown, complete sequence Length = 182992 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 aaaacaaaaacaaatattggagaa 208 |||| ||||||||||||||||||| Sbjct: 18608 aaaaaaaaaacaaatattggagaa 18631
>ref|XM_625585.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd5_4230), partial mRNA Length = 3090 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 1487 caaaaacaaaaacaaatatt 1506
>gb|AC068399.9| Homo sapiens chromosome 8, clone RP11-809K10, complete sequence Length = 195367 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 aaaaacaaaaacaaatattg 203 |||||||||||||||||||| Sbjct: 54329 aaaaacaaaaacaaatattg 54348
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 aaaataatttaaaaaagtct 97 |||||||||||||||||||| Sbjct: 1505586 aaaataatttaaaaaagtct 1505605
>gb|AC092230.1|AC092230 Drosophila melanogaster, chromosome 2L, region 26F-27X, BAC clone BACR25K24, complete sequence Length = 174376 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 agcaaaaacaaaaacaaatattgg 204 ||||||||||| |||||||||||| Sbjct: 728 agcaaaaacaataacaaatattgg 705
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively spliced, complete cds Length = 1421559 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 tctacctaaaaataatttaaaaaa 93 |||||| ||||||||||||||||| Sbjct: 601467 tctaccaaaaaataatttaaaaaa 601490
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaggacgaaacctcttttaa 23 |||||||||||||||||||| Sbjct: 1416413 aaggacgaaacctcttttaa 1416394
>dbj|AK053322.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130009M23 product:hypothetical protein, full insert sequence Length = 1397 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 1144 caaaaacaaaaacaaatatt 1125
>gb|AC022459.6|AC022459 Homo sapiens BAC clone RP11-28I21 from 1, complete sequence Length = 163291 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 atggtcaagaaaggaggaca 312 |||||||||||||||||||| Sbjct: 42118 atggtcaagaaaggaggaca 42137
>gb|AC025887.4|AC025887 Homo sapiens chromosome , clone RP11-386P4, complete sequence Length = 150655 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 atgcagcaaaaacaaaaacaaata 200 |||||||||||||||||| ||||| Sbjct: 4718 atgcagcaaaaacaaaaataaata 4741
>gb|AC009623.6|AC009623 Homo sapiens chromosome 8, clone RP11-219J21, complete sequence Length = 196953 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 agcaaaaacaaaaacaaata 200 |||||||||||||||||||| Sbjct: 17359 agcaaaaacaaaaacaaata 17340
>gb|AC093307.5| Homo sapiens chromosome 5 clone RP11-810C16, complete sequence Length = 176199 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 94530 caaaaacaaaaacaaatatt 94549
>emb|BX813516.1|CNS0ADNG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZE04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1324 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 ccacatgcagcaaaaacaaaaaca 196 |||||||| ||||||||||||||| Sbjct: 616 ccacatgctgcaaaaacaaaaaca 593
>gb|AC079891.5| Homo sapiens BAC clone RP11-57M17 from 4, complete sequence Length = 43012 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 atgcagcaaaaacaaaaaca 196 |||||||||||||||||||| Sbjct: 26147 atgcagcaaaaacaaaaaca 26128
>gb|AC009501.4| Homo sapiens BAC clone RP11-511I11 from 2, complete sequence Length = 157173 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 144868 caaaaacaaaaacaaatatt 144849
>gb|AC068400.10| Homo sapiens chromosome 17, clone RP11-378E13, complete sequence Length = 205588 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 126208 caaaaacaaaaacaaatatt 126227
>gb|AC138623.1| Homo sapiens BAC clone RP11-1251L1 from 2, complete sequence Length = 91428 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 atgcagcaaaaacaaaaacaaata 200 ||||| |||||||||||||||||| Sbjct: 32611 atgcaacaaaaacaaaaacaaata 32634
>gb|AC155725.3| Mus musculus 6 BAC RP24-231N5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 167534 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gcagcaaaaacaaaaacaaa 198 |||||||||||||||||||| Sbjct: 130341 gcagcaaaaacaaaaacaaa 130322
>gb|AC013815.27| Homo sapiens chromosome 8, clone RP11-21J16, complete sequence Length = 115281 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 aaaaacaaaaacaaatattg 203 |||||||||||||||||||| Sbjct: 99890 aaaaacaaaaacaaatattg 99909
>gb|AY010117.1| Petromyzon marinus homeodomain protein DlxB (DlxB) mRNA, partial cds Length = 2054 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 acgacaacgacgacgacgtg 229 |||||||||||||||||||| Sbjct: 674 acgacaacgacgacgacgtg 655
>gb|AC106874.4| Homo sapiens BAC clone RP11-390E19 from 2, complete sequence Length = 121348 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 atgcagcaaaaacaaaaacaaata 200 |||||||||||||||||| ||||| Sbjct: 68416 atgcagcaaaaacaaaaataaata 68439
>gb|AC008269.4| Homo sapiens BAC clone RP11-95H11 from 2, complete sequence Length = 161935 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 160287 caaaaacaaaaacaaatatt 160268
>gb|AC007900.5|AC007900 Homo sapiens chromosome 17, clone CTB-125F20, complete sequence Length = 74853 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 66682 caaaaacaaaaacaaatatt 66663
>gb|AC010169.8| Homo sapiens 3 BAC RP11-424L2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111951 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 atgcagcaaaaacaaaaacaaata 200 ||||| |||||||||||||||||| Sbjct: 68197 atgcaacaaaaacaaaaacaaata 68174
>gb|AC068205.25| Homo sapiens chromosome 11, clone RP11-472I20, complete sequence Length = 205069 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 47187 caaaaacaaaaacaaatatt 47206
>gb|AC114771.3| Homo sapiens BAC clone RP11-425I13 from 4, complete sequence Length = 121946 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 atgcagcaaaaacaaaaacaaata 200 ||||| |||||||||||||||||| Sbjct: 78481 atgcaacaaaaacaaaaacaaata 78504
>gb|AF274573.4| Homo sapiens chromosome X clone RP11-316K19, RP11-316M19, RP4-687A5 map q28, complete sequence Length = 189436 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cctaaaaataatttaaaaaa 93 |||||||||||||||||||| Sbjct: 153447 cctaaaaataatttaaaaaa 153466
>gb|AC092047.3| Homo sapiens chromosome 3 clone RP11-219I21, complete sequence Length = 194742 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 atgcagcaaaaacaaaaacaaata 200 ||||| |||||||||||||||||| Sbjct: 127303 atgcaacaaaaacaaaaacaaata 127280
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 cgacgacgtgctcgaccgcg 239 |||||||||||||||||||| Sbjct: 883340 cgacgacgtgctcgaccgcg 883359
>dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_F06 Length = 130968 Score = 40.1 bits (20), Expect = 5.3 Identities = 77/96 (80%) Strand = Plus / Plus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 ||||||||||||| || || ||||||||| |||||||||||||| | || |||| | Sbjct: 92739 aggaggacatggacggaggcaatcttggtggtggcgcagacggggcaagcatcaacggcg 92798 Query: 364 ggctcgcacgcaccgcacagggacaggtgccggcac 399 | |||||| | ||||||||| ||||| | |||||| Sbjct: 92799 gcctcgcaggtgccgcacaggcacaggcggcggcac 92834
>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0090H18 Length = 174842 Score = 40.1 bits (20), Expect = 5.3 Identities = 77/96 (80%) Strand = Plus / Plus Query: 304 aggaggacatggagcgacgcgttcttggtggccgcgcagacggggcaggtgtccacggag 363 ||||||||||||| || || ||||||||| |||||||||||||| | || |||| | Sbjct: 37264 aggaggacatggacggaggcaatcttggtggtggcgcagacggggcaagcatcaacggcg 37323 Query: 364 ggctcgcacgcaccgcacagggacaggtgccggcac 399 | |||||| | ||||||||| ||||| | |||||| Sbjct: 37324 gcctcgcaggtgccgcacaggcacaggcggcggcac 37359
>dbj|AB113354.2| Sus scrofa 433 kb genomic segment, located between the non-classical and classical SLA class I gene cluster, clone: BAC 499E6 Length = 154749 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 agcaaaaacaaaaacaaata 200 |||||||||||||||||||| Sbjct: 71526 agcaaaaacaaaaacaaata 71507
>dbj|AB012240.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18C1 Length = 71618 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 caaaaacaaatattggagaa 208 |||||||||||||||||||| Sbjct: 65635 caaaaacaaatattggagaa 65654
>gb|AC006144.1|AC006144 Homo sapiens PAC clone RP1-296G17 from Xq23, complete sequence Length = 81184 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 atgcagcaaaaacaaaaacaaata 200 |||||||||||||||||| ||||| Sbjct: 56116 atgcagcaaaaacaaaaataaata 56093
>gb|AC005067.2|AC005067 Homo sapiens BAC clone CTB-122E10 from 7q11.23-q21.1, complete sequence Length = 89448 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aaaaacaaaaacaaatattg 203 |||||||||||||||||||| Sbjct: 29656 aaaaacaaaaacaaatattg 29637
>emb|CT485603.4| RP43-005L22, complete sequence Length = 204041 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ccaagcccacatgcagcaaa 186 |||||||||||||||||||| Sbjct: 150484 ccaagcccacatgcagcaaa 150503
>emb|Z82211.1|HS447N6 Human DNA sequence from clone RP3-447N6 on chromosome X, complete sequence Length = 132229 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 atgcagcaaaaacaaaaacaaata 200 |||||||||||||||||| ||||| Sbjct: 70684 atgcagcaaaaacaaaaataaata 70661
>gb|AE003614.4| Drosophila melanogaster chromosome 2L, section 23 of 83 of the complete sequence Length = 259718 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 agcaaaaacaaaaacaaatattgg 204 ||||||||||| |||||||||||| Sbjct: 27284 agcaaaaacaataacaaatattgg 27261
>gb|AC159649.3| Mus musculus BAC clone RP23-46D6 from chromosome 12, complete sequence Length = 198777 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 99146 caaaaacaaaaacaaatatt 99127
>dbj|AP002373.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-212D19, complete sequence Length = 138197 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 atctacatgcaaactccagc 120 |||||||||||||||||||| Sbjct: 115210 atctacatgcaaactccagc 115191
>dbj|D90115.1|HRAPRXC2 Armoracia rusticana prxC2 gene for peroxidase isozyme, complete cds Length = 3095 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 gcaaaaacaaaaacaaatattgga 205 |||||||||||||||| ||||||| Sbjct: 1384 gcaaaaacaaaaacaagtattgga 1407
>gb|AC135084.4| Mus musculus BAC clone RP24-249E6 from 17, complete sequence Length = 188990 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cctaaaaataatttaaaaaa 93 |||||||||||||||||||| Sbjct: 50072 cctaaaaataatttaaaaaa 50053
>gb|AC128697.4| Mus musculus BAC clone RP24-388P9 from 12, complete sequence Length = 169780 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agcaaaaacaaaaacaaata 200 |||||||||||||||||||| Sbjct: 137261 agcaaaaacaaaaacaaata 137280
>emb|CT010444.10| Mouse DNA sequence from clone RP23-151L20 on chromosome 12, complete sequence Length = 198654 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ctaaaaataatttaaaaaag 94 |||||||||||||||||||| Sbjct: 178428 ctaaaaataatttaaaaaag 178409
>gb|AC154585.2| Mus musculus BAC clone RP23-359K10 from 12, complete sequence Length = 198520 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 155716 caaaaacaaaaacaaatatt 155697
>emb|CR383674.8| Zebrafish DNA sequence from clone DKEY-17G17 in linkage group 25, complete sequence Length = 212086 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aaaaacaaaaacaaatattg 203 |||||||||||||||||||| Sbjct: 65921 aaaaacaaaaacaaatattg 65902
>emb|BX005295.21| Zebrafish DNA sequence from clone CH211-181P19, complete sequence Length = 131528 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cctaaaaataatttaaaaaa 93 |||||||||||||||||||| Sbjct: 18644 cctaaaaataatttaaaaaa 18663
>gb|DQ007986.1| Cryptococcus neoformans var. grubii isolate RV58146 intergenic spacer 1 and 5S ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence Length = 2164 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 1714 acatgctgcaaaaacaaaaacaaa 1691
>gb|DQ007985.1| Cryptococcus neoformans var. grubii isolate WM554 intergenic spacer 1 and 5S ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence Length = 2168 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 1711 acatgctgcaaaaacaaaaacaaa 1688
>gb|DQ007984.1| Cryptococcus neoformans var. grubii isolate RV55451 intergenic spacer 1 and 5S ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence Length = 2166 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 1709 acatgctgcaaaaacaaaaacaaa 1686
>gb|DQ007983.1| Cryptococcus neoformans var. grubii isolate CBS4868 intergenic spacer 1 and 5S ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence Length = 2157 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 1706 acatgctgcaaaaacaaaaacaaa 1683
>gb|DQ007982.1| Cryptococcus neoformans var. grubii isolate CBS7812 intergenic spacer 1 and 5S ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence Length = 2157 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 1706 acatgctgcaaaaacaaaaacaaa 1683
>gb|DQ007981.1| Cryptococcus neoformans var. grubii isolate RV60074 intergenic spacer 1 and 5S ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence Length = 2156 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 1706 acatgctgcaaaaacaaaaacaaa 1683
>gb|DQ007980.1| Cryptococcus neoformans var. grubii isolate RV65662 intergenic spacer 1 and 5S ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence Length = 2157 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 1706 acatgctgcaaaaacaaaaacaaa 1683
>gb|DQ007979.1| Cryptococcus neoformans var. grubii isolate RV66025 intergenic spacer 1 and 5S ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence Length = 2157 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 1706 acatgctgcaaaaacaaaaacaaa 1683
>gb|DQ007978.1| Cryptococcus neoformans var. grubii isolate CBS886 intergenic spacer 1 and 5S ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence Length = 2157 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 1706 acatgctgcaaaaacaaaaacaaa 1683
>gb|DQ007977.1| Cryptococcus neoformans var. grubii isolate CBS1932 intergenic spacer 1 and 5S ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence Length = 2157 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 1706 acatgctgcaaaaacaaaaacaaa 1683
>gb|DQ007976.1| Cryptococcus neoformans var. grubii isolate BD2 intergenic spacer 1 and 5S ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence Length = 2157 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 1706 acatgctgcaaaaacaaaaacaaa 1683
>gb|DQ007975.1| Cryptococcus neoformans var. grubii isolate CBS6961 intergenic spacer 1 and 5S ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence Length = 2157 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 1706 acatgctgcaaaaacaaaaacaaa 1683
>gb|DQ007974.1| Cryptococcus neoformans var. grubii isolate CBS1143 intergenic spacer 1 and 5S ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence Length = 2157 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 1706 acatgctgcaaaaacaaaaacaaa 1683
>gb|DQ007973.1| Cryptococcus neoformans var. grubii isolate CBS1144 intergenic spacer 1 and 5S ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence Length = 2156 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 1705 acatgctgcaaaaacaaaaacaaa 1682
>gb|DQ007972.1| Cryptococcus neoformans var. grubii isolate CBS1931 intergenic spacer 1 and 5S ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence Length = 2157 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 1706 acatgctgcaaaaacaaaaacaaa 1683
>gb|AC165349.2| Mus musculus BAC clone RP23-212M22 from chromosome 12, complete sequence Length = 199483 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agcaaaaacaaaaacaaata 200 |||||||||||||||||||| Sbjct: 31745 agcaaaaacaaaaacaaata 31764
>emb|AL935265.4| Zebrafish DNA sequence from clone DKEY-66M24, complete sequence Length = 197137 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cctaaaaataatttaaaaaa 93 |||||||||||||||||||| Sbjct: 183453 cctaaaaataatttaaaaaa 183472
>emb|AL713871.8| Mouse DNA sequence from clone RP23-40P1 on chromosome X, complete sequence Length = 230701 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agcaaaaacaaaaacaaata 200 |||||||||||||||||||| Sbjct: 104124 agcaaaaacaaaaacaaata 104143
>emb|AL845286.8| Mouse DNA sequence from clone RP23-328F20 on chromosome 2, complete sequence Length = 195593 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 acctaaaaataatttaaaaa 92 |||||||||||||||||||| Sbjct: 84955 acctaaaaataatttaaaaa 84974
>emb|AL604045.7| Mouse DNA sequence from clone RP23-418O11 on chromosome 11, complete sequence Length = 221399 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 agcaaaaacaaaaacaaata 200 |||||||||||||||||||| Sbjct: 25531 agcaaaaacaaaaacaaata 25512
>emb|AL606934.12| Mouse DNA sequence from clone RP23-138L21 on chromosome 4, complete sequence Length = 211580 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 caaaaacaaaaacaaatatt 202 |||||||||||||||||||| Sbjct: 4516 caaaaacaaaaacaaatatt 4497
>emb|AL732608.8| Mouse DNA sequence from clone RP23-243C9 on chromosome 4, complete sequence Length = 126615 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tacctaaaaataatttaaaa 91 |||||||||||||||||||| Sbjct: 72061 tacctaaaaataatttaaaa 72080
>emb|X84707.1|HSDNAMIA H.sapiens MIA gene Length = 3573 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 tctacctaaaaataatttaaaaaa 93 ||||||| |||||||||||||||| Sbjct: 456 tctacctcaaaataatttaaaaaa 479
>dbj|AB065404.1| Filobasidiella neoformans DNA, 5S/18S rRNA intergenic spacer 2, partial sequence, strain:M9216 Length = 548 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 185 acatgctgcaaaaacaaaaacaaa 162
>dbj|AB065403.1| Filobasidiella neoformans DNA, 5S/18S rRNA intergenic spacer 2, partial sequence, strain:M9105 Length = 542 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 185 acatgctgcaaaaacaaaaacaaa 162
>dbj|AB065402.1| Filobasidiella neoformans DNA, 5S/18S rRNA intergenic spacer 2, partial sequence, strain:M9106 Length = 542 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 185 acatgctgcaaaaacaaaaacaaa 162
>dbj|AB065401.1| Filobasidiella neoformans DNA, 5S/18S rRNA intergenic spacer 2, partial sequence, strain:M9253 Length = 542 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 185 acatgctgcaaaaacaaaaacaaa 162
>dbj|AB065400.1| Filobasidiella neoformans DNA, 5S/18S rRNA intergenic spacer 2, partial sequence, strain:M9252 Length = 542 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 185 acatgctgcaaaaacaaaaacaaa 162
>dbj|AB065399.1| Filobasidiella neoformans DNA, 5S/18S rRNA intergenic spacer 2, partial sequence, strain:M9251 Length = 542 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 185 acatgctgcaaaaacaaaaacaaa 162
>dbj|AB065398.1| Filobasidiella neoformans DNA, 5S/18S rRNA intergenic spacer 2, partial sequence, strain:M9217 Length = 542 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 acatgcagcaaaaacaaaaacaaa 198 |||||| ||||||||||||||||| Sbjct: 185 acatgctgcaaaaacaaaaacaaa 162 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,276,372 Number of Sequences: 3902068 Number of extensions: 5276372 Number of successful extensions: 419376 Number of sequences better than 10.0: 225 Number of HSP's better than 10.0 without gapping: 229 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 416923 Number of HSP's gapped (non-prelim): 2451 length of query: 399 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 377 effective length of database: 17,147,199,772 effective search space: 6464494314044 effective search space used: 6464494314044 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
