ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast36g01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY105780.1| Zea mays PCO081534 mRNA sequence 218 9e-54
2dbj|AK105036.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 9e-51
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 206 4e-50
4dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic D... 206 4e-50
5ref|NM_118108.5| Arabidopsis thaliana unknown protein AT4G19880 ... 157 3e-35
6gb|BT000887.1| Arabidopsis thaliana clone C105363 unknown protei... 157 3e-35
7gb|AF370272.1| Arabidopsis thaliana unknown protein (At4g19880) ... 157 3e-35
8emb|BX826373.1|CNS0A41Z Arabidopsis thaliana Full-length cDNA Co... 157 3e-35
9emb|BX826293.1|CNS0A458 Arabidopsis thaliana Full-length cDNA Co... 157 3e-35
10emb|BX827166.1|CNS0A3PD Arabidopsis thaliana Full-length cDNA Co... 157 3e-35
11emb|BX828739.1|CNS0A3IB Arabidopsis thaliana Full-length cDNA Co... 157 3e-35
12ref|NM_001036594.1| Arabidopsis thaliana unknown protein AT4G198... 137 3e-29
13emb|AL161551.2|ATCHRIV51 Arabidopsis thaliana DNA chromosome 4, ... 137 3e-29
14emb|AL024486.1|ATT16H5 Arabidopsis thaliana DNA chromosome 4, BA... 137 3e-29
15emb|BX826752.1|CNS0A43U Arabidopsis thaliana Full-length cDNA Co... 135 1e-28
16ref|NM_001036595.1| Arabidopsis thaliana unknown protein AT4G198... 133 4e-28
17emb|BX826386.1|CNS0A40C Arabidopsis thaliana Full-length cDNA Co... 127 3e-26
18ref|NM_123870.1| Arabidopsis thaliana unknown protein AT5G45020 ... 107 2e-20
19gb|BT000547.1| Arabidopsis thaliana unknown protein (At5g45020/... 107 2e-20
20gb|AF375406.1| Arabidopsis thaliana AT5g45020/K21C13_21 mRNA, co... 107 2e-20
21emb|BX829570.1|CNS0A05B Arabidopsis thaliana Full-length cDNA Co... 107 2e-20
22gb|AY917145.1| Thlaspi caerulescens glutathione transferase (gst... 105 1e-19
23emb|BX830492.1|CNS0A27R Arabidopsis thaliana Full-length cDNA Co... 100 6e-18
24dbj|AB010693.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 96 9e-17
25gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone mth2-1... 50 0.005
26gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 48 0.020
27gb|AE005112.1| Halobacterium sp. NRC-1 section 143 of 170 of the... 44 0.31
28gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 1.2
29gb|AC152952.1| Mus musculus 6 BAC RP23-86B3 (Roswell Park Cancer... 40 4.8
30gb|AC132290.3| Mus musculus BAC clone RP24-318H2 from chromosome... 40 4.8
31gb|AC122880.4| Mus musculus BAC clone RP23-77F18 from 8, complet... 40 4.8
32emb|AL031719.12|HS380F5 Human DNA sequence from clone LA16c-380F... 40 4.8
33gb|AC161426.5| Mus musculus BAC clone RP23-69L13 from chromosome... 40 4.8
34gb|AE006467.1| Homo sapiens 16p13.3 sequence section 6 of 8 40 4.8
35dbj|AB211187.1| Lycopersicon esculentum nii1 mRNA for nitrite re... 40 4.8
36gb|AC005772.1|AC005772 Homo sapiens chromosome 17, clone hRPK.92... 40 4.8
37gb|AC132614.3| Mus musculus BAC clone RP23-298K1 from 6, complet... 40 4.8

>gb|AY105780.1| Zea mays PCO081534 mRNA sequence
          Length = 1009

 Score =  218 bits (110), Expect = 9e-54
 Identities = 146/158 (92%)
 Strand = Plus / Minus

                                                                        
Query: 193  atggacgggtggctcccgtagtagtgctgcctgatgtgctccatgttcaccgtgctgctg 252
            |||||||| ||||| ||||||||||||| ||||||||| |||||||| || |||||||||
Sbjct: 1007 atggacggatggcttccgtagtagtgcttcctgatgtgttccatgttgacggtgctgctg 948

                                                                        
Query: 253  atcccggggatctggtagatgtccttggtgtagttgaacaggttggggtactccctcagg 312
            || |||||||||||||| |||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 947  atgccggggatctggtatatgtccttggtgtagttgaacaggtttgggtactccctcagc 888

                                                  
Query: 313  agcttcttgttgcacttgaagtgaactgcgtaaacctc 350
            |||||||||||||||||||||||||| ||||| |||||
Sbjct: 887  agcttcttgttgcacttgaagtgaacggcgtagacctc 850



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>dbj|AK105036.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B07, full
           insert sequence
          Length = 584

 Score =  208 bits (105), Expect = 9e-51
 Identities = 195/225 (86%)
 Strand = Plus / Minus

                                                                       
Query: 126 cctctctctgtcatggggagcattgtagtcgatgttggggccttgggggatgatcccgta 185
           |||||||||||| || ||||| ||||| |||||||| ||||||   ||||||||||||||
Sbjct: 229 cctctctctgtcgtgtggagcgttgtaatcgatgttagggcctgcagggatgatcccgta 170

                                                                       
Query: 186 ggggttgatggacgggtggctcccgtagtagtgctgcctgatgtgctccatgttcaccgt 245
           ||| || |||||||| ||||| || ||||||||||  || |||||||||||||| |||||
Sbjct: 169 gggatttatggacggatggcttccatagtagtgctttcttatgtgctccatgttaaccgt 110

                                                                       
Query: 246 gctgctgatcccggggatctggtagatgtccttggtgtagttgaacaggttggggtactc 305
           ||||||||| || || ||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 109 gctgctgatgccaggaatctggtagatgtccttggtgtaattgaacagattggggtattc 50

                                                        
Query: 306 cctcaggagcttcttgttgcacttgaagtgaactgcgtaaacctc 350
           ||| |||||| | |||||||| |||||||| || || ||||||||
Sbjct: 49  cctgaggagccttttgttgcatttgaagtggacagcataaacctc 5



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  206 bits (104), Expect = 4e-50
 Identities = 194/224 (86%)
 Strand = Plus / Plus

                                                                            
Query: 126      cctctctctgtcatggggagcattgtagtcgatgttggggccttgggggatgatcccgta 185
                |||||||||||| || ||||| ||||| |||||||| ||||||   ||||||||||||||
Sbjct: 12731017 cctctctctgtcgtgtggagcgttgtaatcgatgttagggcctgcagggatgatcccgta 12731076

                                                                            
Query: 186      ggggttgatggacgggtggctcccgtagtagtgctgcctgatgtgctccatgttcaccgt 245
                ||| || |||||||| ||||| || ||||||||||  || |||||||||||||| |||||
Sbjct: 12731077 gggatttatggacggatggcttccatagtagtgctttcttatgtgctccatgttaaccgt 12731136

                                                                            
Query: 246      gctgctgatcccggggatctggtagatgtccttggtgtagttgaacaggttggggtactc 305
                ||||||||| || || ||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 12731137 gctgctgatgccaggaatctggtagatgtccttggtgtaattgaacagattggggtattc 12731196

                                                            
Query: 306      cctcaggagcttcttgttgcacttgaagtgaactgcgtaaacct 349
                ||| |||||| | |||||||| |||||||| || || |||||||
Sbjct: 12731197 cctgaggagccttttgttgcatttgaagtggacagcataaacct 12731240



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>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0086N11
          Length = 146185

 Score =  206 bits (104), Expect = 4e-50
 Identities = 194/224 (86%)
 Strand = Plus / Plus

                                                                         
Query: 126   cctctctctgtcatggggagcattgtagtcgatgttggggccttgggggatgatcccgta 185
             |||||||||||| || ||||| ||||| |||||||| ||||||   ||||||||||||||
Sbjct: 79294 cctctctctgtcgtgtggagcgttgtaatcgatgttagggcctgcagggatgatcccgta 79353

                                                                         
Query: 186   ggggttgatggacgggtggctcccgtagtagtgctgcctgatgtgctccatgttcaccgt 245
             ||| || |||||||| ||||| || ||||||||||  || |||||||||||||| |||||
Sbjct: 79354 gggatttatggacggatggcttccatagtagtgctttcttatgtgctccatgttaaccgt 79413

                                                                         
Query: 246   gctgctgatcccggggatctggtagatgtccttggtgtagttgaacaggttggggtactc 305
             ||||||||| || || ||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct: 79414 gctgctgatgccaggaatctggtagatgtccttggtgtaattgaacagattggggtattc 79473

                                                         
Query: 306   cctcaggagcttcttgttgcacttgaagtgaactgcgtaaacct 349
             ||| |||||| | |||||||| |||||||| || || |||||||
Sbjct: 79474 cctgaggagccttttgttgcatttgaagtggacagcataaacct 79517



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>ref|NM_118108.5| Arabidopsis thaliana unknown protein AT4G19880 transcript variant
            AT4G19880.1 mRNA, complete cds
          Length = 1418

 Score =  157 bits (79), Expect = 3e-35
 Identities = 178/211 (84%)
 Strand = Plus / Minus

                                                                        
Query: 149  tgtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctcc 208
            |||| |||||||| || || || |||||||||||  | |||||||| ||||||||||| |
Sbjct: 1083 tgtaatcgatgtttggtccatgagggatgatcccaaaagggttgatcgacgggtggcttc 1024

                                                                        
Query: 209  cgtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggt 268
            | ||||| |||||| ||||||| | |||||| |||||||| || || |||||||||||| 
Sbjct: 1023 catagtaatgctgcttgatgtgattcatgttaaccgtgctactcataccggggatctgga 964

                                                                        
Query: 269  agatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcact 328
            | ||||| || |||||||||||||  || || |||||||| | ||| ||||||||||| |
Sbjct: 963  aaatgtctttcgtgtagttgaacaaattcggatactcccttatgagtttcttgttgcatt 904

                                           
Query: 329  tgaagtgaactgcgtaaacctcgtcaaatct 359
            ||||||| ||||| |||||||||||||||||
Sbjct: 903  tgaagtggactgcataaacctcgtcaaatct 873



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>gb|BT000887.1| Arabidopsis thaliana clone C105363 unknown protein (At4g19880) mRNA,
            complete cds
          Length = 1102

 Score =  157 bits (79), Expect = 3e-35
 Identities = 178/211 (84%)
 Strand = Plus / Minus

                                                                        
Query: 149  tgtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctcc 208
            |||| |||||||| || || || |||||||||||  | |||||||| ||||||||||| |
Sbjct: 1036 tgtaatcgatgtttggtccatgagggatgatcccaaaagggttgatcgacgggtggcttc 977

                                                                        
Query: 209  cgtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggt 268
            | ||||| |||||| ||||||| | |||||| |||||||| || || |||||||||||| 
Sbjct: 976  catagtaatgctgcttgatgtgattcatgttaaccgtgctactcataccggggatctgga 917

                                                                        
Query: 269  agatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcact 328
            | ||||| || |||||||||||||  || || |||||||| | ||| ||||||||||| |
Sbjct: 916  aaatgtctttcgtgtagttgaacaaattcggatactcccttatgagtttcttgttgcatt 857

                                           
Query: 329  tgaagtgaactgcgtaaacctcgtcaaatct 359
            ||||||| ||||| |||||||||||||||||
Sbjct: 856  tgaagtggactgcataaacctcgtcaaatct 826



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>gb|AF370272.1| Arabidopsis thaliana unknown protein (At4g19880) mRNA, partial cds
          Length = 1310

 Score =  157 bits (79), Expect = 3e-35
 Identities = 178/211 (84%)
 Strand = Plus / Minus

                                                                        
Query: 149  tgtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctcc 208
            |||| |||||||| || || || |||||||||||  | |||||||| ||||||||||| |
Sbjct: 1024 tgtaatcgatgtttggtccatgagggatgatcccaaaagggttgatcgacgggtggcttc 965

                                                                        
Query: 209  cgtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggt 268
            | ||||| |||||| ||||||| | |||||| |||||||| || || |||||||||||| 
Sbjct: 964  catagtaatgctgcttgatgtgattcatgttaaccgtgctactcataccggggatctgga 905

                                                                        
Query: 269  agatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcact 328
            | ||||| || |||||||||||||  || || |||||||| | ||| ||||||||||| |
Sbjct: 904  aaatgtctttcgtgtagttgaacaaattcggatactcccttatgagtttcttgttgcatt 845

                                           
Query: 329  tgaagtgaactgcgtaaacctcgtcaaatct 359
            ||||||| ||||| |||||||||||||||||
Sbjct: 844  tgaagtggactgcataaacctcgtcaaatct 814



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>emb|BX826373.1|CNS0A41Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB1ZF10 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1308

 Score =  157 bits (79), Expect = 3e-35
 Identities = 178/211 (84%)
 Strand = Plus / Minus

                                                                        
Query: 149  tgtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctcc 208
            |||| |||||||| || || || |||||||||||  | |||||||| ||||||||||| |
Sbjct: 1077 tgtaatcgatgtttggtccatgagggatgatcccaaaagggttgatcgacgggtggcttc 1018

                                                                        
Query: 209  cgtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggt 268
            | ||||| |||||| ||||||| | |||||| |||||||| || || |||||||||||| 
Sbjct: 1017 catagtaatgctgcttgatgtgattcatgttaaccgtgctactcataccggggatctgga 958

                                                                        
Query: 269  agatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcact 328
            | ||||| || |||||||||||||  || || |||||||| | ||| ||||||||||| |
Sbjct: 957  aaatgtctttcgtgtagttgaacaaattcggatactcccttatgagtttcttgttgcatt 898

                                           
Query: 329  tgaagtgaactgcgtaaacctcgtcaaatct 359
            ||||||| ||||| |||||||||||||||||
Sbjct: 897  tgaagtggactgcataaacctcgtcaaatct 867



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>emb|BX826293.1|CNS0A458 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB10ZH12 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1193

 Score =  157 bits (79), Expect = 3e-35
 Identities = 178/211 (84%)
 Strand = Plus / Minus

                                                                        
Query: 149  tgtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctcc 208
            |||| |||||||| || || || |||||||||||  | |||||||| ||||||||||| |
Sbjct: 1034 tgtaatcgatgtttggtccatgagggatgatcccaaaagggttgatcgacgggtggcttc 975

                                                                        
Query: 209  cgtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggt 268
            | ||||| |||||| ||||||| | |||||| |||||||| || || |||||||||||| 
Sbjct: 974  catagtaatgctgcttgatgtgattcatgttaaccgtgctactcataccggggatctgga 915

                                                                        
Query: 269  agatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcact 328
            | ||||| || |||||||||||||  || || |||||||| | ||| ||||||||||| |
Sbjct: 914  aaatgtctttcgtgtagttgaacaaattcggatactcccttatgagtttcttgttgcatt 855

                                           
Query: 329  tgaagtgaactgcgtaaacctcgtcaaatct 359
            ||||||| ||||| |||||||||||||||||
Sbjct: 854  tgaagtggactgcataaacctcgtcaaatct 824



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>emb|BX827166.1|CNS0A3PD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS19ZA10 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1358

 Score =  157 bits (79), Expect = 3e-35
 Identities = 178/211 (84%)
 Strand = Plus / Minus

                                                                        
Query: 149  tgtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctcc 208
            |||| |||||||| || || || |||||||||||  | |||||||| ||||||||||| |
Sbjct: 1042 tgtaatcgatgtttggtccatgagggatgatcccaaaagggttgatcgacgggtggcttc 983

                                                                        
Query: 209  cgtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggt 268
            | ||||| |||||| ||||||| | |||||| |||||||| || || |||||||||||| 
Sbjct: 982  catagtaatgctgcttgatgtgattcatgttaaccgtgctactcataccggggatctgga 923

                                                                        
Query: 269  agatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcact 328
            | ||||| || |||||||||||||  || || |||||||| | ||| ||||||||||| |
Sbjct: 922  aaatgtctttcgtgtagttgaacaaattcggatactcccttatgagtttcttgttgcatt 863

                                           
Query: 329  tgaagtgaactgcgtaaacctcgtcaaatct 359
            ||||||| ||||| |||||||||||||||||
Sbjct: 862  tgaagtggactgcataaacctcgtcaaatct 832



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>emb|BX828739.1|CNS0A3IB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL34ZD01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1072

 Score =  157 bits (79), Expect = 3e-35
 Identities = 178/211 (84%)
 Strand = Plus / Minus

                                                                       
Query: 149 tgtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctcc 208
           |||| |||||||| || || || |||||||||||  | |||||||| ||||||||||| |
Sbjct: 963 tgtaatcgatgtttggtccatgagggatgatcccaaaagggttgatcgacgggtggcttc 904

                                                                       
Query: 209 cgtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggt 268
           | ||||| |||||| ||||||| | |||||| |||||||| || || |||||||||||| 
Sbjct: 903 catagtaatgctgcttgatgtgattcatgttaaccgtgctactcataccggggatctgga 844

                                                                       
Query: 269 agatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcact 328
           | ||||| || |||||||||||||  || || |||||||| | ||| ||||||||||| |
Sbjct: 843 aaatgtctttcgtgtagttgaacaaattcggatactcccttatgagtttcttgttgcatt 784

                                          
Query: 329 tgaagtgaactgcgtaaacctcgtcaaatct 359
           ||||||| ||||| |||||||||||||||||
Sbjct: 783 tgaagtggactgcataaacctcgtcaaatct 753



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>ref|NM_001036594.1| Arabidopsis thaliana unknown protein AT4G19880 transcript variant
            AT4G19880.2 mRNA, complete cds
          Length = 1496

 Score =  137 bits (69), Expect = 3e-29
 Identities = 168/201 (83%)
 Strand = Plus / Minus

                                                                        
Query: 149  tgtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctcc 208
            |||| |||||||| || || || |||||||||||  | |||||||| ||||||||||| |
Sbjct: 1161 tgtaatcgatgtttggtccatgagggatgatcccaaaagggttgatcgacgggtggcttc 1102

                                                                        
Query: 209  cgtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggt 268
            | ||||| |||||| ||||||| | |||||| |||||||| || || |||||||||||| 
Sbjct: 1101 catagtaatgctgcttgatgtgattcatgttaaccgtgctactcataccggggatctgga 1042

                                                                        
Query: 269  agatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcact 328
            | ||||| || |||||||||||||  || || |||||||| | ||| ||||||||||| |
Sbjct: 1041 aaatgtctttcgtgtagttgaacaaattcggatactcccttatgagtttcttgttgcatt 982

                                 
Query: 329  tgaagtgaactgcgtaaacct 349
            ||||||| ||||| |||||||
Sbjct: 981  tgaagtggactgcataaacct 961



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>emb|AL161551.2|ATCHRIV51 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 51
          Length = 197114

 Score =  137 bits (69), Expect = 3e-29
 Identities = 168/201 (83%)
 Strand = Plus / Plus

                                                                          
Query: 149    tgtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctcc 208
              |||| |||||||| || || || |||||||||||  | |||||||| ||||||||||| |
Sbjct: 174409 tgtaatcgatgtttggtccatgagggatgatcccaaaagggttgatcgacgggtggcttc 174468

                                                                          
Query: 209    cgtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggt 268
              | ||||| |||||| ||||||| | |||||| |||||||| || || |||||||||||| 
Sbjct: 174469 catagtaatgctgcttgatgtgattcatgttaaccgtgctactcataccggggatctgga 174528

                                                                          
Query: 269    agatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcact 328
              | ||||| || |||||||||||||  || || |||||||| | ||| ||||||||||| |
Sbjct: 174529 aaatgtctttcgtgtagttgaacaaattcggatactcccttatgagtttcttgttgcatt 174588

                                   
Query: 329    tgaagtgaactgcgtaaacct 349
              ||||||| ||||| |||||||
Sbjct: 174589 tgaagtggactgcataaacct 174609



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>emb|AL024486.1|ATT16H5 Arabidopsis thaliana DNA chromosome 4, BAC clone T16H5 (ESSAII project)
          Length = 95417

 Score =  137 bits (69), Expect = 3e-29
 Identities = 168/201 (83%)
 Strand = Plus / Plus

                                                                         
Query: 149   tgtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctcc 208
             |||| |||||||| || || || |||||||||||  | |||||||| ||||||||||| |
Sbjct: 94327 tgtaatcgatgtttggtccatgagggatgatcccaaaagggttgatcgacgggtggcttc 94386

                                                                         
Query: 209   cgtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggt 268
             | ||||| |||||| ||||||| | |||||| |||||||| || || |||||||||||| 
Sbjct: 94387 catagtaatgctgcttgatgtgattcatgttaaccgtgctactcataccggggatctgga 94446

                                                                         
Query: 269   agatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcact 328
             | ||||| || |||||||||||||  || || |||||||| | ||| ||||||||||| |
Sbjct: 94447 aaatgtctttcgtgtagttgaacaaattcggatactcccttatgagtttcttgttgcatt 94506

                                  
Query: 329   tgaagtgaactgcgtaaacct 349
             ||||||| ||||| |||||||
Sbjct: 94507 tgaagtggactgcataaacct 94527



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>emb|BX826752.1|CNS0A43U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB60ZC03 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1258

 Score =  135 bits (68), Expect = 1e-28
 Identities = 177/212 (83%), Gaps = 1/212 (0%)
 Strand = Plus / Minus

                                                                        
Query: 149  tgtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctcc 208
            |||| |||||||| || || || |||||||||||  | |||||||| ||||||||||| |
Sbjct: 1084 tgtaatcgatgtttggtccatgagggatgatcccaaaagggttgatcgacgggtggcttc 1025

                                                                        
Query: 209  cgtagtagtgctgcctgat-gtgctccatgttcaccgtgctgctgatcccggggatctgg 267
            | ||||| |||||| |||| ||| |  ||||| |||||||| || || ||||||||||||
Sbjct: 1024 catagtaatgctgcttgattgtgatttatgttaaccgtgctactcataccggggatctgg 965

                                                                        
Query: 268  tagatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcac 327
             | ||||| || |||||||||||||  || || |||||||| | ||| ||||||||||| 
Sbjct: 964  aaaatgtctttcgtgtagttgaacaaattcggatactcccttatgagtttcttgttgcat 905

                                            
Query: 328  ttgaagtgaactgcgtaaacctcgtcaaatct 359
            |||||||| ||||| |||||||||||||||||
Sbjct: 904  ttgaagtggactgcataaacctcgtcaaatct 873



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>ref|NM_001036595.1| Arabidopsis thaliana unknown protein AT4G19880 transcript variant
            AT4G19880.3 mRNA, complete cds
          Length = 1422

 Score =  133 bits (67), Expect = 4e-28
 Identities = 166/199 (83%)
 Strand = Plus / Minus

                                                                        
Query: 149  tgtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctcc 208
            |||| |||||||| || || || |||||||||||  | |||||||| ||||||||||| |
Sbjct: 1087 tgtaatcgatgtttggtccatgagggatgatcccaaaagggttgatcgacgggtggcttc 1028

                                                                        
Query: 209  cgtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggt 268
            | ||||| |||||| ||||||| | |||||| |||||||| || || |||||||||||| 
Sbjct: 1027 catagtaatgctgcttgatgtgattcatgttaaccgtgctactcataccggggatctgga 968

                                                                        
Query: 269  agatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcact 328
            | ||||| || |||||||||||||  || || |||||||| | ||| ||||||||||| |
Sbjct: 967  aaatgtctttcgtgtagttgaacaaattcggatactcccttatgagtttcttgttgcatt 908

                               
Query: 329  tgaagtgaactgcgtaaac 347
            ||||||| ||||| |||||
Sbjct: 907  tgaagtggactgcataaac 889



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>emb|BX826386.1|CNS0A40C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB20ZE03 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1312

 Score =  127 bits (64), Expect = 3e-26
 Identities = 176/212 (83%), Gaps = 1/212 (0%)
 Strand = Plus / Minus

                                                                        
Query: 149  tgtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctcc 208
            |||| |||||||| || || || |||||||||||  | |||||||| ||||||||||| |
Sbjct: 1005 tgtaatcgatgtttggtccatgagggatgatcccaaaagggttgatcgacgggtggcttc 946

                                                                        
Query: 209  cgtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccgggg-atctgg 267
            | ||||| |||||| ||||||  |  ||||| |||||||| || || |||||| ||||||
Sbjct: 945  catagtaatgctgcttgatgttatttatgttaaccgtgctactcataccgggggatctgg 886

                                                                        
Query: 268  tagatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcac 327
             | ||||| || |||||||||||||  || || |||||||| | ||| ||||||||||| 
Sbjct: 885  aaaatgtctttcgtgtagttgaacaaattcggatactcccttatgagtttcttgttgcat 826

                                            
Query: 328  ttgaagtgaactgcgtaaacctcgtcaaatct 359
            |||||||| ||||| |||||||||||||||||
Sbjct: 825  ttgaagtggactgcataaacctcgtcaaatct 794



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>ref|NM_123870.1| Arabidopsis thaliana unknown protein AT5G45020 mRNA, complete cds
          Length = 1227

 Score =  107 bits (54), Expect = 2e-20
 Identities = 171/210 (81%)
 Strand = Plus / Minus

                                                                        
Query: 150  gtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctccc 209
            ||||||||| |||||||| || |||||||||||| | ||||| || |  |||||||| ||
Sbjct: 1063 gtagtcgatattggggccgtgagggatgatcccgaatgggtttatcgtagggtggcttcc 1004

                                                                        
Query: 210  gtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggta 269
            |||||| || ||| | ||||| |||||||| || ||||| || || ||| | || |||||
Sbjct: 1003 gtagtaatgttgcttaatgtgttccatgtttacggtgctactcatgccgtgtatttggta 944

                                                                        
Query: 270  gatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcactt 329
             ||||| ||  |||||||||| |  || ||||||||||  | |||  |||||||||| ||
Sbjct: 943  aatgtcttttatgtagttgaagatattcgggtactcccgtaagagtctcttgttgcattt 884

                                          
Query: 330  gaagtgaactgcgtaaacctcgtcaaatct 359
            |||||||||||| |||||||| ||||||||
Sbjct: 883  gaagtgaactgcataaacctcatcaaatct 854



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>gb|BT000547.1| Arabidopsis thaliana unknown protein  (At5g45020/K21C13_21) mRNA,
           complete cds
          Length = 978

 Score =  107 bits (54), Expect = 2e-20
 Identities = 171/210 (81%)
 Strand = Plus / Minus

                                                                       
Query: 150 gtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctccc 209
           ||||||||| |||||||| || |||||||||||| | ||||| || |  |||||||| ||
Sbjct: 942 gtagtcgatattggggccgtgagggatgatcccgaatgggtttatcgtagggtggcttcc 883

                                                                       
Query: 210 gtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggta 269
           |||||| || ||| | ||||| |||||||| || ||||| || || ||| | || |||||
Sbjct: 882 gtagtaatgttgcttaatgtgttccatgtttacggtgctactcatgccgtgtatttggta 823

                                                                       
Query: 270 gatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcactt 329
            ||||| ||  |||||||||| |  || ||||||||||  | |||  |||||||||| ||
Sbjct: 822 aatgtcttttatgtagttgaagatattcgggtactcccgtaagagtctcttgttgcattt 763

                                         
Query: 330 gaagtgaactgcgtaaacctcgtcaaatct 359
           |||||||||||| |||||||| ||||||||
Sbjct: 762 gaagtgaactgcataaacctcatcaaatct 733



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>gb|AF375406.1| Arabidopsis thaliana AT5g45020/K21C13_21 mRNA, complete cds
          Length = 1227

 Score =  107 bits (54), Expect = 2e-20
 Identities = 171/210 (81%)
 Strand = Plus / Minus

                                                                        
Query: 150  gtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctccc 209
            ||||||||| |||||||| || |||||||||||| | ||||| || |  |||||||| ||
Sbjct: 1063 gtagtcgatattggggccgtgagggatgatcccgaatgggtttatcgtagggtggcttcc 1004

                                                                        
Query: 210  gtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggta 269
            |||||| || ||| | ||||| |||||||| || ||||| || || ||| | || |||||
Sbjct: 1003 gtagtaatgttgcttaatgtgttccatgtttacggtgctactcatgccgtgtatttggta 944

                                                                        
Query: 270  gatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcactt 329
             ||||| ||  |||||||||| |  || ||||||||||  | |||  |||||||||| ||
Sbjct: 943  aatgtcttttatgtagttgaagatattcgggtactcccgtaagagtctcttgttgcattt 884

                                          
Query: 330  gaagtgaactgcgtaaacctcgtcaaatct 359
            |||||||||||| |||||||| ||||||||
Sbjct: 883  gaagtgaactgcataaacctcatcaaatct 854



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>emb|BX829570.1|CNS0A05B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB21ZG08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 535

 Score =  107 bits (54), Expect = 2e-20
 Identities = 171/210 (81%)
 Strand = Plus / Minus

                                                                       
Query: 150 gtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctccc 209
           ||||||||| |||||||| || |||||||||||| | ||||| || |  |||||||| ||
Sbjct: 396 gtagtcgatattggggccgtgagggatgatcccgaatgggtttatcgtagggtggcttcc 337

                                                                       
Query: 210 gtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggta 269
           |||||| || ||| | ||||| |||||||| || ||||| || || ||| | || |||||
Sbjct: 336 gtagtaatgttgcttaatgtgttccatgtttacggtgctactcatgccgtgtatttggta 277

                                                                       
Query: 270 gatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcactt 329
            ||||| ||  |||||||||| |  || ||||||||||  | |||  |||||||||| ||
Sbjct: 276 aatgtcttttatgtagttgaagatattcgggtactcccgtaagagtctcttgttgcattt 217

                                         
Query: 330 gaagtgaactgcgtaaacctcgtcaaatct 359
           |||||||||||| |||||||| ||||||||
Sbjct: 216 gaagtgaactgcataaacctcatcaaatct 187



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>gb|AY917145.1| Thlaspi caerulescens glutathione transferase (gst) mRNA, complete cds
          Length = 1325

 Score =  105 bits (53), Expect = 1e-19
 Identities = 134/161 (83%)
 Strand = Plus / Minus

                                                                        
Query: 199  gggtggctcccgtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccg 258
            |||||||| |||||||| |||||| |||||||   ||||||||| ||||     || |||
Sbjct: 1048 gggtggcttccgtagtaatgctgcttgatgtgactcatgttcactgtgccatccataccg 989

                                                                        
Query: 259  gggatctggtagatgtccttggtgtagttgaacaggttggggtactccctcaggagcttc 318
            | ||||||| | ||||| || |||||||||||||| || || |||||||||| ||| |||
Sbjct: 988  gagatctggaatatgtctttcgtgtagttgaacagattcggatactccctcaagagtttc 929

                                                     
Query: 319  ttgttgcacttgaagtgaactgcgtaaacctcgtcaaatct 359
            ||||||||||||||||| || || ||||||||||| |||||
Sbjct: 928  ttgttgcacttgaagtggaccgcataaacctcgtcgaatct 888



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>emb|BX830492.1|CNS0A27R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB85ZF11 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1611

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 170/210 (80%)
 Strand = Plus / Minus

                                                                        
Query: 150  gtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctccc 209
            ||||||||| |||||||| || |||||||||||| | ||||| || |  |||||||| ||
Sbjct: 1447 gtagtcgatattggggccgtgagggatgatcccgaatgggtttatcgtagggtggcttcc 1388

                                                                        
Query: 210  gtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggta 269
            |||||| || ||| | ||||| |||||||| || ||||| || || ||| | || |||||
Sbjct: 1387 gtagtaatgttgcttaatgtgttccatgtttacggtgctactcatgccgtgtatttggta 1328

                                                                        
Query: 270  gatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcactt 329
             ||||| ||  |||||||||| |  || ||||||||||  | |||  |||||||||| ||
Sbjct: 1327 aatgtcttttatgtagttgaagatattcgggtactcccgtaagagtctcttgttgcattt 1268

                                          
Query: 330  gaagtgaactgcgtaaacctcgtcaaatct 359
            ||||| |||||| |||||||| ||||||||
Sbjct: 1267 gaagttaactgcataaacctcatcaaatct 1238



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>dbj|AB010693.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21C13
          Length = 75709

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 162/200 (81%)
 Strand = Plus / Minus

                                                                         
Query: 150   gtagtcgatgttggggccttgggggatgatcccgtaggggttgatggacgggtggctccc 209
             ||||||||| |||||||| || |||||||||||| | ||||| || |  |||||||| ||
Sbjct: 66957 gtagtcgatattggggccgtgagggatgatcccgaatgggtttatcgtagggtggcttcc 66898

                                                                         
Query: 210   gtagtagtgctgcctgatgtgctccatgttcaccgtgctgctgatcccggggatctggta 269
             |||||| || ||| | ||||| |||||||| || ||||| || || ||| | || |||||
Sbjct: 66897 gtagtaatgttgcttaatgtgttccatgtttacggtgctactcatgccgtgtatttggta 66838

                                                                         
Query: 270   gatgtccttggtgtagttgaacaggttggggtactccctcaggagcttcttgttgcactt 329
              ||||| ||  |||||||||| |  || ||||||||||  | |||  |||||||||| ||
Sbjct: 66837 aatgtcttttatgtagttgaagatattcgggtactcccgtaagagtctcttgttgcattt 66778

                                 
Query: 330   gaagtgaactgcgtaaacct 349
             |||||||||||| |||||||
Sbjct: 66777 gaagtgaactgcataaacct 66758



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>gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone mth2-138b18, complete
             sequence
          Length = 128810

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 313   agcttcttgttgcacttgaagtgaactgcgtaaacct 349
             ||||||||||| ||||| ||||||||||| |||||||
Sbjct: 17593 agcttcttgttacacttaaagtgaactgcataaacct 17629



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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 210     gtagtagtgctgcctgatgtgctccatgttcaccgt 245
               ||||||||||| | ||||||| ||||||||||||||
Sbjct: 2099831 gtagtagtgctccgtgatgtggtccatgttcaccgt 2099866



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>gb|AE005112.1| Halobacterium sp. NRC-1 section 143 of 170 of the complete genome
          Length = 12204

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 201  gtggctcccgtagtagtgctgcctgatgtgctccatgt 238
            |||||| | ||||||||||||| ||| |||||||||||
Sbjct: 6289 gtggctgcggtagtagtgctgcttgacgtgctccatgt 6326



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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                           
Query: 177     gatcccgtaggggttgatggacgggtggctcccgtagtagtgctgcctgatgtgctccat 236
               ||||||||  |||||||||| |  |||||||  ||| ||||||| |  ||| ||||||||
Sbjct: 4507200 gatcccgttcgggttgatggtcttgtggctcatgtaatagtgcttctggatatgctccat 4507141

                        
Query: 237     gttcaccgt 245
               |||||||||
Sbjct: 4507140 gttcaccgt 4507132



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>gb|AC152952.1| Mus musculus 6 BAC RP23-86B3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 187484

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    aacagcctctctctgtcatg 140
              ||||||||||||||||||||
Sbjct: 150455 aacagcctctctctgtcatg 150436



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>gb|AC132290.3| Mus musculus BAC clone RP24-318H2 from chromosome 10, complete sequence
          Length = 152306

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     acaagcaaagcaaaaccaca 72
              ||||||||||||||||||||
Sbjct: 133125 acaagcaaagcaaaaccaca 133106



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>gb|AC122880.4| Mus musculus BAC clone RP23-77F18 from 8, complete sequence
          Length = 189549

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    acaagcaaagcaaaaccaca 72
             ||||||||||||||||||||
Sbjct: 93543 acaagcaaagcaaaaccaca 93524



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>emb|AL031719.12|HS380F5 Human DNA sequence from clone LA16c-380F5 on chromosome 16 Contains
             part of the gene KIAA0590, ESTs, STSs, GSSs and three
             putative CpG islands, complete sequence
          Length = 44653

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   tgttggggccttgggggatg 177
             ||||||||||||||||||||
Sbjct: 19145 tgttggggccttgggggatg 19126



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>gb|AC161426.5| Mus musculus BAC clone RP23-69L13 from chromosome 10, complete sequence
          Length = 255667

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     acaagcaaagcaaaaccaca 72
              ||||||||||||||||||||
Sbjct: 103785 acaagcaaagcaaaaccaca 103766



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>gb|AE006467.1| Homo sapiens 16p13.3 sequence section 6 of 8
          Length = 279011

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    tgttggggccttgggggatg 177
              ||||||||||||||||||||
Sbjct: 206961 tgttggggccttgggggatg 206942



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>dbj|AB211187.1| Lycopersicon esculentum nii1 mRNA for nitrite reductase, partial
           cds
          Length = 703

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 agtagtgctgcctgatgtgc 231
           ||||||||||||||||||||
Sbjct: 177 agtagtgctgcctgatgtgc 196



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>gb|AC005772.1|AC005772 Homo sapiens chromosome 17, clone hRPK.924_A_14, complete sequence
          Length = 175339

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     caaagcaaaaccacagcacc 77
              ||||||||||||||||||||
Sbjct: 118238 caaagcaaaaccacagcacc 118219



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>gb|AC132614.3| Mus musculus BAC clone RP23-298K1 from 6, complete sequence
          Length = 198160

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 121  aacagcctctctctgtcatg 140
            ||||||||||||||||||||
Sbjct: 5152 aacagcctctctctgtcatg 5133


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,523,707
Number of Sequences: 3902068
Number of extensions: 2523707
Number of successful extensions: 51431
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51333
Number of HSP's gapped (non-prelim): 96
length of query: 359
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 337
effective length of database: 17,147,199,772
effective search space: 5778606323164
effective search space used: 5778606323164
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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