>OPSD_LIMPA (O42431) Rhodopsin (Fragment)|
          Length = 289

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 246 RWLLGQSPVLNWRVRWDHMLAGRFFEGNALISIGSCTLP 362
           RW++G  P+ N+R   DH + G  F   + +   SC +P
Sbjct: 106 RWIVGLKPIRNFRFTEDHAIMGLAF---SWVMALSCAVP 141

>SYE_PYRAE (Q8ZU33) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 570

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 261 QSPVLNWRVRWDHMLAGRFFEGNALISI 344
           Q P +N  + WD ML GRF EG A++ I
Sbjct: 223 QPPEVNLEL-WDKMLEGRFKEGEAVLRI 249

>R13L1_ARATH (Q9LRR4) Putative disease resistance RPP13-like protein 1|
          Length = 1054

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 21/66 (31%), Positives = 30/66 (45%)
 Frame = -2

Query: 347  TYRNQSIALEKSPCQHMIPSYSPIQHWRLSQKPATMGCTSLHPKILSIAGLRGNRCLHGP 168
            +YRN      KS C  ++    P+ H+    K     CTSL+   LS      N  L GP
Sbjct: 922  SYRNLQTLSIKSSCDTLVKF--PLNHFANLDKLEVDQCTSLYSLELS------NEHLRGP 973

Query: 167  DCLQDL 150
            + L++L
Sbjct: 974  NALRNL 979

>NTDO_CAEEL (Q03614) Sodium-dependent dopamine transporter (DA transporter)|
           (DAT)
          Length = 615

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +1

Query: 82  FTNSMDKPETHFTGILVPSICGYRSCKQSGP*RHLFPRNPAMLSILGCKEVQPI-VAGFW 258
           FT+ ++   +  +G ++ S+ GY SCK   P   +    P ++ ++  + +  +  A FW
Sbjct: 341 FTSFINCATSFLSGFVIFSVLGYMSCKSGKPIEAVAQEGPGLVFVVYPEALSTMPYAPFW 400

Query: 259 DNL 267
             L
Sbjct: 401 SVL 403

>YGEH_ECOLI (P76639) Hypothetical protein ygeH|
          Length = 458

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -1

Query: 324 PRKISLPTYDPIVLANSTLEIVPEASDNGLYFFTS*DTEHC 202
           P   SL T DP++L    ++I+     +GLY +    T  C
Sbjct: 124 PFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFC 164

>NORR2_RALEU (Q9K4U8) Nitric oxide reductase transcription regulator norR2|
          Length = 521

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = -2

Query: 227 LHPKILSIAGLRGNRCLHG----PDCLQDL*PQMLGTKIPVKWVSGLSM 93
           LHP++ +I   RG  C H     PD    L  + +G  +PV    G S+
Sbjct: 71  LHPRLAAILARRGVTCFHHDSMLPDPYDGLIDEHVGEPLPVHDCMGTSL 119

>MIAA_SALTY (P37724) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 316

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 19/68 (27%), Positives = 33/68 (48%)
 Frame = -2

Query: 296 IPSYSPIQHWRLSQKPATMGCTSLHPKILSIAGLRGNRCLHGPDCLQDL*PQMLGTKIPV 117
           +PS  P    R+ Q+ A +G  +LH ++  I  +   R +H  D      PQ L   + V
Sbjct: 122 LPSADPEVRSRIEQQAAELGWEALHQQLQEIDPVAAAR-IHPND------PQRLSRALEV 174

Query: 116 KWVSGLSM 93
            ++SG ++
Sbjct: 175 FFISGKTL 182

>MIAA_SALTI (Q8Z186) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 316

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 19/68 (27%), Positives = 33/68 (48%)
 Frame = -2

Query: 296 IPSYSPIQHWRLSQKPATMGCTSLHPKILSIAGLRGNRCLHGPDCLQDL*PQMLGTKIPV 117
           +PS  P    R+ Q+ A +G  +LH ++  I  +   R +H  D      PQ L   + V
Sbjct: 122 LPSADPEVRSRIEQQAAELGWEALHQQLQEIDPVAAAR-IHPND------PQRLSRALEV 174

Query: 116 KWVSGLSM 93
            ++SG ++
Sbjct: 175 FFISGKTL 182

>MIAA_ECOL6 (Q8CXV3) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 316

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 20/68 (29%), Positives = 32/68 (47%)
 Frame = -2

Query: 296 IPSYSPIQHWRLSQKPATMGCTSLHPKILSIAGLRGNRCLHGPDCLQDL*PQMLGTKIPV 117
           +PS  P    R+ Q+ A  G  SLH ++  I  +   R +H  D      PQ L   + V
Sbjct: 122 LPSADPEVRARIEQQAAEQGWESLHRQLQEIDPVAAAR-IHPND------PQRLSRALEV 174

Query: 116 KWVSGLSM 93
            ++SG ++
Sbjct: 175 FFISGKTL 182

>MIAA_ECO57 (Q8XDN3) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 316

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 20/68 (29%), Positives = 32/68 (47%)
 Frame = -2

Query: 296 IPSYSPIQHWRLSQKPATMGCTSLHPKILSIAGLRGNRCLHGPDCLQDL*PQMLGTKIPV 117
           +PS  P    R+ Q+ A  G  SLH ++  I  +   R +H  D      PQ L   + V
Sbjct: 122 LPSADPEVRARIEQQAAEQGWESLHRQLQEIDPVAAAR-IHPND------PQRLSRALEV 174

Query: 116 KWVSGLSM 93
            ++SG ++
Sbjct: 175 FFISGKTL 182


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,020,480
Number of Sequences: 219361
Number of extensions: 1087656
Number of successful extensions: 2869
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2869
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)