>emb|BX649531.7| Zebrafish DNA sequence from clone CH211-285L4 in linkage group 15,
              complete sequence
          Length = 185865

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 17     gtcattaaatttgtcataaaata 39
              |||||||||||||||||||||||
Sbjct: 149386 gtcattaaatttgtcataaaata 149364

>emb|BX649507.3| Zebrafish DNA sequence from clone CH211-154H20 in linkage group 18,
              complete sequence
          Length = 166185

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 179    attactaaaacattgacatcaacacca 205
              |||||||||||||||||| ||||||||
Sbjct: 154149 attactaaaacattgacaacaacacca 154123

>gb|BC110092.1| Danio rerio zgc:123203, mRNA (cDNA clone MGC:123203 IMAGE:7292271),
            complete cds
          Length = 1215

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 179  attactaaaacattgacatcaacacca 205
            |||||||||||||||||| ||||||||
Sbjct: 1177 attactaaaacattgacaacaacacca 1151

>ref|NM_001037580.1| Danio rerio zgc:123203 (zgc:123203), mRNA
          Length = 1215

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 179  attactaaaacattgacatcaacacca 205
            |||||||||||||||||| ||||||||
Sbjct: 1177 attactaaaacattgacaacaacacca 1151

>gb|AC118621.6| Mus musculus chromosome 7, clone RP24-63H14, complete sequence
          Length = 230898

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 125    atcatttgcaaataaaaatcataaccata 153
              ||||| |||||||||||||||||| ||||
Sbjct: 180563 atcatctgcaaataaaaatcataatcata 180535

>emb|AL590416.4| Human DNA sequence from clone RP11-89C21 on chromosome 10p13-14
             Contains the 3' end of the gene for a protein related to
             the N terminus of tre (RNTRE) (KIAA0019), gene FLJ34168, a
             novel gene and a CpG island, complete sequence
          Length = 171026

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 298   aagctactaataataatactg 318
             |||||||||||||||||||||
Sbjct: 60404 aagctactaataataatactg 60424

>emb|Y10124.2|TTNARZYWV Thermus thermophilus nar operon (narCGHIJK genes)
          Length = 10622

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 394  gaggcggtagatggcctcggc 414
            |||||||||||||||||||||
Sbjct: 6503 gaggcggtagatggcctcggc 6483

>ref|XM_782795.1| PREDICTED: Strongylocentrotus purpuratus similar to centaurin, alpha
            1 (LOC582857), mRNA
          Length = 2886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 114  atgtggtacctatcatttgca 134
            |||||||||||||||||||||
Sbjct: 1352 atgtggtacctatcatttgca 1372

>emb|CR387936.8| Zebrafish DNA sequence from clone CH211-85P6 in linkage group 8, complete
              sequence
          Length = 170195

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 18     tcattaaatttgtcataaaat 38
              |||||||||||||||||||||
Sbjct: 144657 tcattaaatttgtcataaaat 144637

>gb|AC073367.11| Homo sapiens chromosome 10 clone RP11-197M22, complete sequence
          Length = 168920

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 8     ttgccccatgtcattaaattt 28
             |||||||||||||||||||||
Sbjct: 32516 ttgccccatgtcattaaattt 32536

>gb|AC026392.7| Homo sapiens chromosome 10 clone RP11-238C10, complete sequence
          Length = 177829

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 298    aagctactaataataatactg 318
              |||||||||||||||||||||
Sbjct: 143527 aagctactaataataatactg 143547

>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    aaataaaaatcataaccata 153
              ||||||||||||||||||||
Sbjct: 711651 aaataaaaatcataaccata 711632

>gb|AC115724.10| Mus musculus chromosome 3, clone RP23-20L18, complete sequence
          Length = 208154

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   tatcatttgcaaataaaaat 143
             ||||||||||||||||||||
Sbjct: 60531 tatcatttgcaaataaaaat 60512

>gb|AC116500.13| Mus musculus chromosome 5, clone RP24-297N9, complete sequence
          Length = 177689

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 379   gaatcaccacttgtagaggc 398
             ||||||||||||||||||||
Sbjct: 27961 gaatcaccacttgtagaggc 27980



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 379   gaatcaccacttgtagaggc 398
             ||||||||||||||||||||
Sbjct: 18440 gaatcaccacttgtagaggc 18459

>gb|AY814900.1| Schistosoma japonicum SJCHGC02687 protein mRNA, complete cds
          Length = 1325

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 184 taaaacattgacatcaacaccaac 207
           ||||||||||||||||||| ||||
Sbjct: 732 taaaacattgacatcaacatcaac 709

>gb|AC025794.9| Mus musculus chromosome 19, clone RP23-62O7, complete sequence
          Length = 242418

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    gcaaataaaaatcataacca 151
              ||||||||||||||||||||
Sbjct: 197882 gcaaataaaaatcataacca 197901

>gb|AC112677.8| Mus musculus chromosome 3, clone RP23-176J23, complete sequence
          Length = 215247

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    tatcatttgcaaataaaaat 143
              ||||||||||||||||||||
Sbjct: 194470 tatcatttgcaaataaaaat 194451

>gb|AC093562.3| Homo sapiens chromosome 1 clone RP11-553F10, complete sequence
          Length = 205171

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    tgtgacacttgttaaggtcc 91
             ||||||||||||||||||||
Sbjct: 32155 tgtgacacttgttaaggtcc 32136

>gb|AC096643.2| Homo sapiens chromosome 1 clone RP11-408A22, complete sequence
          Length = 163962

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     tgtgacacttgttaaggtcc 91
              ||||||||||||||||||||
Sbjct: 159857 tgtgacacttgttaaggtcc 159838

>gb|AC087330.6| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-3M10, complete
              sequence
          Length = 206093

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 379    gaatcaccacttgtagaggc 398
              ||||||||||||||||||||
Sbjct: 202144 gaatcaccacttgtagaggc 202163



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 379    gaatcaccacttgtagaggc 398
              ||||||||||||||||||||
Sbjct: 192623 gaatcaccacttgtagaggc 192642

>gb|AC160393.2| Mus musculus BAC clone RP23-136M3 from chromosome 12, complete sequence
          Length = 215692

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     ttgccatatgttggtatcac 68
              ||||||||||||||||||||
Sbjct: 129492 ttgccatatgttggtatcac 129473

>gb|AC016045.8|AC016045 Homo sapiens chromosome 15 clone RP11-96N2 map 15q21, complete sequence
          Length = 164868

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   aaaccaggaaacattcccta 277
             ||||||||||||||||||||
Sbjct: 40071 aaaccaggaaacattcccta 40052

>gb|AC002994.2|AC002994 Homo sapiens chromosome 17, clone RP5-987K16, complete sequence
          Length = 143813

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   tatcatttgcaaataaaaat 143
             ||||||||||||||||||||
Sbjct: 15608 tatcatttgcaaataaaaat 15589

>dbj|AP001032.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-874N19, complete
              sequence
          Length = 165113

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    accataaaccaggaaacatt 272
              ||||||||||||||||||||
Sbjct: 143108 accataaaccaggaaacatt 143089

>dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39E03, TM0266,
             complete sequence
          Length = 113459

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 138   aaaaatcataaccataaatctgaa 161
             |||||||| |||||||||||||||
Sbjct: 69126 aaaaatcaaaaccataaatctgaa 69103

>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175,
             complete sequence
          Length = 108582

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 138   aaaaatcataaccataaatctgaa 161
             |||||||| |||||||||||||||
Sbjct: 20117 aaaaatcaaaaccataaatctgaa 20094

>emb|AL606922.5| Mouse DNA sequence from clone RP23-149E24 on chromosome 4, complete
              sequence
          Length = 191957

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 257    taaaccaggaaacattccct 276
              ||||||||||||||||||||
Sbjct: 152915 taaaccaggaaacattccct 152934


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,070,833
Number of Sequences: 3902068
Number of extensions: 5070833
Number of successful extensions: 89559
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89495
Number of HSP's gapped (non-prelim): 64
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)