>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  107 bits (54), Expect = 3e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                            
Query: 202      tcagtacaccttcttggagaagaaggtgcggaggccgaacagcccctgcggcggcacgca 261
                ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   || 
Sbjct: 40278875 tcagtacaccttcttggagaagaaggtccggaggccgaacagcccctgcggcgggttgct 40278934

                                                          
Query: 262      ctcctcgccggcgacttccgcgcagaccgcgttgttccggca 303
                 ||||||||| || |||||| |||   |||||||||||||||
Sbjct: 40278935 ttcctcgccgccggcttccgagcacgacgcgttgttccggca 40278976

>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1793G04
          Length = 156714

 Score =  107 bits (54), Expect = 3e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                          
Query: 202    tcagtacaccttcttggagaagaaggtgcggaggccgaacagcccctgcggcggcacgca 261
              ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   || 
Sbjct: 144653 tcagtacaccttcttggagaagaaggtccggaggccgaacagcccctgcggcgggttgct 144712

                                                        
Query: 262    ctcctcgccggcgacttccgcgcagaccgcgttgttccggca 303
               ||||||||| || |||||| |||   |||||||||||||||
Sbjct: 144713 ttcctcgccgccggcttccgagcacgacgcgttgttccggca 144754

>dbj|AK110737.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-F04, full
            insert sequence
          Length = 1577

 Score =  107 bits (54), Expect = 3e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                        
Query: 202  tcagtacaccttcttggagaagaaggtgcggaggccgaacagcccctgcggcggcacgca 261
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   || 
Sbjct: 1395 tcagtacaccttcttggagaagaaggtccggaggccgaacagcccctgcggcgggttgct 1336

                                                      
Query: 262  ctcctcgccggcgacttccgcgcagaccgcgttgttccggca 303
             ||||||||| || |||||| |||   |||||||||||||||
Sbjct: 1335 ttcctcgccgccggcttccgagcacgacgcgttgttccggca 1294

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 85      acgggtggcggacggacgggatcg 108
               |||||||||||||||| |||||||
Sbjct: 3061631 acgggtggcggacggaggggatcg 3061608

>ref|XM_478962.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1557

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 acgcactcctcgccggcgacttcc 280
           |||| |||||||||||||||||||
Sbjct: 106 acgcgctcctcgccggcgacttcc 83

>gb|DQ083856.1| Cortinarius ochraceopallescens voucher TF2000-106 RNA polymerase II
            largest subunit (RPB1) gene, partial cds
          Length = 1392

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 81   gcgaacgggtggcggacggacggg 104
            |||||||||||||||| |||||||
Sbjct: 1207 gcgaacgggtggcggagggacggg 1184

>ref|XM_456473.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A03465g)
           partial mRNA
          Length = 1350

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 gccgcgtcttctttaccggc 372
           ||||||||||||||||||||
Sbjct: 305 gccgcgtcttctttaccggc 286

>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 299   cggcacgcggcggctggcgcgctc 322
             |||||||||| |||||||||||||
Sbjct: 82080 cggcacgcggtggctggcgcgctc 82103

>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces
              hansenii
          Length = 1249565

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 353    gccgcgtcttctttaccggc 372
              ||||||||||||||||||||
Sbjct: 256883 gccgcgtcttctttaccggc 256864

>gb|AC026745.8| Homo sapiens chromosome 5 clone RP11-245L6, complete sequence
          Length = 128963

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    gcagagataagagagaaaaa 66
             ||||||||||||||||||||
Sbjct: 62881 gcagagataagagagaaaaa 62862

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 50       gagataagagagaaaaagaa 69
                ||||||||||||||||||||
Sbjct: 19532759 gagataagagagaaaaagaa 19532778



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 298     ccggcacgcggcggctggcg 317
               ||||||||||||||||||||
Sbjct: 8834171 ccggcacgcggcggctggcg 8834152

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 257      acgcactcctcgccggcgacttcc 280
                |||| |||||||||||||||||||
Sbjct: 24035804 acgcgctcctcgccggcgacttcc 24035827

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 50       gagataagagagaaaaagaa 69
                ||||||||||||||||||||
Sbjct: 19565240 gagataagagagaaaaagaa 19565259

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 301     gcacgcggcggctggcgcgc 320
               ||||||||||||||||||||
Sbjct: 6877195 gcacgcggcggctggcgcgc 6877176

>gb|AC096883.2| Sus scrofa clone RP44-276G17, complete sequence
          Length = 148088

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    aagagagaaaaagaatgctt 74
             ||||||||||||||||||||
Sbjct: 44716 aagagagaaaaagaatgctt 44697

>dbj|AP004690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0437G01
          Length = 147101

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    ccggcacgcggcggctggcg 317
              ||||||||||||||||||||
Sbjct: 111920 ccggcacgcggcggctggcg 111901

>dbj|AP003859.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1033_B09
          Length = 120648

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   ccggcacgcggcggctggcg 317
             ||||||||||||||||||||
Sbjct: 17814 ccggcacgcggcggctggcg 17795

>dbj|AP003750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1174_G05
          Length = 111202

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 257   acgcactcctcgccggcgacttcc 280
             |||| |||||||||||||||||||
Sbjct: 77412 acgcgctcctcgccggcgacttcc 77435

>dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0506C10
          Length = 150549

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    gagataagagagaaaaagaa 69
             ||||||||||||||||||||
Sbjct: 46972 gagataagagagaaaaagaa 46991

>dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0042B03
          Length = 167669

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   gagataagagagaaaaagaa 69
            ||||||||||||||||||||
Sbjct: 8319 gagataagagagaaaaagaa 8338

>dbj|AP004691.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0453D01
          Length = 147461

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 50     gagataagagagaaaaagaa 69
              ||||||||||||||||||||
Sbjct: 127516 gagataagagagaaaaagaa 127535

>gb|AC149052.3| Mus musculus BAC clone RP24-548O1 from 7, complete sequence
          Length = 209182

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     agagataagagagaaaaaga 68
              ||||||||||||||||||||
Sbjct: 167455 agagataagagagaaaaaga 167474

>dbj|AB231882.1| Scolionema suvaense gene for zinc finger protein Ssu-Zic, complete
            cds
          Length = 46150

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   agataagagagaaaaagaat 70
            ||||||||||||||||||||
Sbjct: 4998 agataagagagaaaaagaat 5017

>dbj|AP006706.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09I23, TM0590a,
            complete sequence
          Length = 16141

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   agagagaaaaagaatgctta 75
            ||||||||||||||||||||
Sbjct: 9979 agagagaaaaagaatgctta 9998

>dbj|AP006705.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01O03, TM0588d,
            complete sequence
          Length = 20171

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   agagagaaaaagaatgctta 75
            ||||||||||||||||||||
Sbjct: 6551 agagagaaaaagaatgctta 6570


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,950,345
Number of Sequences: 3902068
Number of extensions: 2950345
Number of successful extensions: 66387
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65979
Number of HSP's gapped (non-prelim): 405
length of query: 399
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 377
effective length of database: 17,147,199,772
effective search space: 6464494314044
effective search space used: 6464494314044
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)