ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast35e04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family mem... 33 0.22
2WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family mem... 31 0.83

>WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family member 1|
           (WASP-family protein member 1) (WAVE-1 protein)
          Length = 559

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -2

Query: 376 SPSTRASTWPPS*RSSVMPDSEPADGPSIEPVSSQSASI 260
           +P   A   PPS  S V+P SEP   PS  PV S + S+
Sbjct: 462 APGPHAPLMPPSPPSQVLPASEPKRHPSTLPVISDARSV 500



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>WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member 1|
           (WASP-family protein member 1) (WAVE-1 protein)
           (Verprolin homology domain-containing protein 1)
          Length = 559

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -2

Query: 376 SPSTRASTWPPS*RSSVMPDSEPADGPSIEPVSSQSASI 260
           +P       PPS  S V+P SEP   PS  PV S + S+
Sbjct: 462 APGPHVPLMPPSPPSQVIPASEPKRHPSTLPVISDARSV 500


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,397,566
Number of Sequences: 219361
Number of extensions: 880718
Number of successful extensions: 2265
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2265
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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