ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast34g07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 44 0.024
2gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome... 40 0.37
3gb|AE017336.2| Bacillus anthracis str. 'Ames Ancestor' plasmid p... 40 0.37
4gb|AF065404.1| Bacillus anthracis virulence plasmid PX01, comple... 40 0.37
5gb|AC013701.6| Homo sapiens, clone RP11-22C8, complete sequence 40 0.37
6gb|AE011190.1| Bacillus anthracis str. A2012 plasmid pXO1, compl... 40 0.37
7emb|BX510312.7| Zebrafish DNA sequence from clone CH211-240B21 i... 40 0.37
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 0.37
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 0.37
10dbj|AP003296.3| Oryza sativa (japonica cultivar-group) genomic D... 40 0.37
11dbj|AK065822.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 0.37
12emb|BX649231.4| Zebrafish DNA sequence from clone DKEY-225H23 in... 40 0.37
13emb|AL354774.17| Human DNA sequence from clone RP11-67L17 on chr... 38 1.5
14gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell ... 38 1.5
15emb|BX510931.8| Zebrafish DNA sequence from clone CH211-132M19 i... 38 1.5
16gb|AC007494.8| Homo sapiens chromosome 16 clone RP11-329J18, com... 38 1.5
17gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 ... 38 1.5
18emb|AL590443.1|CNS07EGA chromosome III of strain GB-M1 of Enceph... 38 1.5
19gb|AC104918.13| Mus musculus chromosome 7, clone RP23-335G1, com... 36 5.7
20gb|AC129943.8| Mus musculus chromosome 5, clone RP23-410M21, com... 36 5.7
21ref|XM_711633.1| Candida albicans SC5314 endo-1,3-beta-glucanase... 36 5.7
22gb|AC084159.2| Caenorhabditis elegans cosmid Y73B3A, complete se... 36 5.7
23emb|CR388124.15| Zebrafish DNA sequence from clone CH211-72C8 in... 36 5.7
24gb|AC123551.5| Mus musculus BAC clone RP24-330P10 from chromosom... 36 5.7
25gb|AC122246.5| Mus musculus BAC clone RP23-152K13 from 1, comple... 36 5.7
26emb|BX928741.7| Zebrafish DNA sequence from clone CH211-119L15 i... 36 5.7
27gb|AC098743.3| Mus musculus BAC clone RP23-122O4 from 1, complet... 36 5.7
28gb|AC006333.3| Homo sapiens BAC clone RP11-390E23 from 7, comple... 36 5.7
29gb|AC006478.2| Homo sapiens PAC clone RP5-847G17 from 7, complet... 36 5.7
30gb|AC100751.6| Mus musculus chromosome 18, clone RP23-249P18, co... 36 5.7
31gb|AC143357.1| Pan troglodytes BAC clone RP43-171L24 from 7, com... 36 5.7
32gb|AC126011.9| Medicago truncatula clone mth2-24f16, complete se... 36 5.7
33emb|AL049732.11|HSDA14C6 Human DNA sequence from clone RP6-14C6 ... 36 5.7
34emb|BX571865.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 36 5.7
35emb|AL033391.1|CAC20C1 C.albicans cosmid Ca20C1 36 5.7
36gb|AC108877.2| Drosophila melanogaster 3L BAC RP98-17L24 (Roswel... 36 5.7
37gb|AC023751.3| Drosophila melanogaster 3L BAC RP98-31C17 (Roswel... 36 5.7
38gb|AC007541.9| Homo sapiens 12q24.1 BAC RPCI11-412D9 (Roswell Pa... 36 5.7
39gb|AF332093.1|AF332093 White spot syndrome virus, complete genome 36 5.7
40gb|AC019179.4|AC019179 Homo sapiens BAC clone RP11-240A16 from 4... 36 5.7
41emb|AL670860.6| Mouse DNA sequence from clone RP23-50K11 on chro... 36 5.7
42gb|AC053523.5| Homo sapiens BAC clone RP11-563J6 from 2, complet... 36 5.7
43gb|AF369029.2| White spot syndrome virus, complete genome 36 5.7
44dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic D... 36 5.7
45dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic D... 36 5.7
46gb|AC163632.3| Mus musculus BAC clone RP23-339H2 from chromosome... 36 5.7
47emb|AL929213.5| Zebrafish DNA sequence from clone CH211-144A19, ... 36 5.7
48gb|AC002464.1|AC002464 Human BAC clone CTA-331P3, complete sequence 36 5.7
49gb|AF440570.1| Shrimp white spot syndrome virus, complete genome 36 5.7
50gb|AY897234.1| Shrimp white spot syndrome virus envelope protein... 36 5.7
51gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16... 36 5.7
52emb|BX000439.11| Mouse DNA sequence from clone RP23-430L20 on ch... 36 5.7
53dbj|AP006142.1| Lotus japonicus genomic DNA, chromosome 2, clone... 36 5.7
54gb|AF047661.2| Caenorhabditis elegans cosmid M70, complete sequence 36 5.7
55gb|AC158523.2| Mus musculus BAC clone RP23-371I11 from chromosom... 36 5.7
56emb|AL805920.7| Mouse DNA sequence from clone RP23-162M7 on chro... 36 5.7

>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 44.1 bits (22), Expect = 0.024
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 21     aacatatttgctcaaaataaat 42
              ||||||||||||||||||||||
Sbjct: 456908 aacatatttgctcaaaataaat 456929



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>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05,
              complete sequence
          Length = 178013

 Score = 40.1 bits (20), Expect = 0.37
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     acatatttgctcaaaataaa 41
              ||||||||||||||||||||
Sbjct: 146571 acatatttgctcaaaataaa 146552



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>gb|AE017336.2| Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, complete sequence
          Length = 181677

 Score = 40.1 bits (20), Expect = 0.37
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     atatttgctcaaaataaata 43
              ||||||||||||||||||||
Sbjct: 118575 atatttgctcaaaataaata 118594



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>gb|AF065404.1| Bacillus anthracis virulence plasmid PX01, complete sequence
          Length = 181654

 Score = 40.1 bits (20), Expect = 0.37
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     atatttgctcaaaataaata 43
              ||||||||||||||||||||
Sbjct: 160658 atatttgctcaaaataaata 160639



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>gb|AC013701.6| Homo sapiens, clone RP11-22C8, complete sequence
          Length = 160275

 Score = 40.1 bits (20), Expect = 0.37
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    acatatttgctcaaaataaa 41
             ||||||||||||||||||||
Sbjct: 80311 acatatttgctcaaaataaa 80292



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>gb|AE011190.1| Bacillus anthracis str. A2012 plasmid pXO1, complete sequence
          Length = 181677

 Score = 40.1 bits (20), Expect = 0.37
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     atatttgctcaaaataaata 43
              ||||||||||||||||||||
Sbjct: 118575 atatttgctcaaaataaata 118594



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>emb|BX510312.7| Zebrafish DNA sequence from clone CH211-240B21 in linkage group 5,
             complete sequence
          Length = 177177

 Score = 40.1 bits (20), Expect = 0.37
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    aacatatttgctcaaaataa 40
             ||||||||||||||||||||
Sbjct: 88481 aacatatttgctcaaaataa 88500



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 0.37
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 22       acatatttgctcaaaataaa 41
                ||||||||||||||||||||
Sbjct: 18673456 acatatttgctcaaaataaa 18673437



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 0.37
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 19       ccaacatatttgctcaaaat 38
                ||||||||||||||||||||
Sbjct: 21627764 ccaacatatttgctcaaaat 21627783



 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 27       tttgctcaaaataaataa 44
                ||||||||||||||||||
Sbjct: 40463266 tttgctcaaaataaataa 40463283



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>dbj|AP003296.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0697C12
          Length = 149098

 Score = 40.1 bits (20), Expect = 0.37
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ccaacatatttgctcaaaat 38
             ||||||||||||||||||||
Sbjct: 84317 ccaacatatttgctcaaaat 84336



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>dbj|AK065822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042A04, full
           insert sequence
          Length = 1906

 Score = 40.1 bits (20), Expect = 0.37
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 19  ccaacatatttgctcaaaat 38
           ||||||||||||||||||||
Sbjct: 474 ccaacatatttgctcaaaat 493



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>emb|BX649231.4| Zebrafish DNA sequence from clone DKEY-225H23 in linkage group 20,
             complete sequence
          Length = 153569

 Score = 40.1 bits (20), Expect = 0.37
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    aacatatttgctcaaaataa 40
             ||||||||||||||||||||
Sbjct: 10982 aacatatttgctcaaaataa 10963



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>emb|AL354774.17| Human DNA sequence from clone RP11-67L17 on chromosome 13, complete
             sequence
          Length = 125693

 Score = 38.2 bits (19), Expect = 1.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 22    acatatttgctcaaaataaataa 44
             |||||||||| ||||||||||||
Sbjct: 70271 acatatttgcacaaaataaataa 70293



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>gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 187921

 Score = 38.2 bits (19), Expect = 1.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 25     tatttgctcaaaataaata 43
              |||||||||||||||||||
Sbjct: 140661 tatttgctcaaaataaata 140679



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>emb|BX510931.8| Zebrafish DNA sequence from clone CH211-132M19 in linkage group 21,
              complete sequence
          Length = 181237

 Score = 38.2 bits (19), Expect = 1.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 22     acatatttgctcaaaataaataa 44
              ||||||||||| |||||||||||
Sbjct: 171360 acatatttgctgaaaataaataa 171338



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>gb|AC007494.8| Homo sapiens chromosome 16 clone RP11-329J18, complete sequence
          Length = 206262

 Score = 38.2 bits (19), Expect = 1.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    acccaacatatttgctcaa 35
             |||||||||||||||||||
Sbjct: 49505 acccaacatatttgctcaa 49487



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>gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 of 74 of the complete
              sequence
          Length = 302665

 Score = 38.2 bits (19), Expect = 1.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 25     tatttgctcaaaataaata 43
              |||||||||||||||||||
Sbjct: 222232 tatttgctcaaaataaata 222250



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>emb|AL590443.1|CNS07EGA chromosome III of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 194439

 Score = 38.2 bits (19), Expect = 1.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    caacatatttgctcaaaat 38
             |||||||||||||||||||
Sbjct: 55038 caacatatttgctcaaaat 55020



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>gb|AC104918.13| Mus musculus chromosome 7, clone RP23-335G1, complete sequence
          Length = 204099

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 11    ttaaatacccaacatatt 28
             ||||||||||||||||||
Sbjct: 91876 ttaaatacccaacatatt 91893



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>gb|AC129943.8| Mus musculus chromosome 5, clone RP23-410M21, complete sequence
          Length = 178544

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 13     aaatacccaacatatttgctca 34
              |||| |||||||||||||||||
Sbjct: 126587 aaatgcccaacatatttgctca 126608



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>ref|XM_711633.1| Candida albicans SC5314 endo-1,3-beta-glucanase (CaO19_3417), mRNA
          Length = 2205

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 24   atatttgctcaaaataaa 41
            ||||||||||||||||||
Sbjct: 1336 atatttgctcaaaataaa 1353



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>gb|AC084159.2| Caenorhabditis elegans cosmid Y73B3A, complete sequence
          Length = 122855

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 26    atttgctcaaaataaata 43
             ||||||||||||||||||
Sbjct: 55335 atttgctcaaaataaata 55318



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>emb|CR388124.15| Zebrafish DNA sequence from clone CH211-72C8 in linkage group 15,
              complete sequence
          Length = 173535

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 17     acccaacatatttgctcaaaat 38
              |||||| |||||||||||||||
Sbjct: 120685 acccaagatatttgctcaaaat 120706



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>gb|AC123551.5| Mus musculus BAC clone RP24-330P10 from chromosome 1, complete sequence
          Length = 167597

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 12     taaatacccaacatattt 29
              ||||||||||||||||||
Sbjct: 123494 taaatacccaacatattt 123511



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>gb|AC122246.5| Mus musculus BAC clone RP23-152K13 from 1, complete sequence
          Length = 203739

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 26     atttgctcaaaataaata 43
              ||||||||||||||||||
Sbjct: 163041 atttgctcaaaataaata 163058



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>emb|BX928741.7| Zebrafish DNA sequence from clone CH211-119L15 in linkage group 8,
             complete sequence
          Length = 58030

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 25    tatttgctcaaaataaataacc 46
             ||||| ||||||||||||||||
Sbjct: 40814 tatttcctcaaaataaataacc 40793



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>gb|AC098743.3| Mus musculus BAC clone RP23-122O4 from 1, complete sequence
          Length = 225868

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 12    taaatacccaacatattt 29
             ||||||||||||||||||
Sbjct: 36924 taaatacccaacatattt 36941



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>gb|AC006333.3| Homo sapiens BAC clone RP11-390E23 from 7, complete sequence
          Length = 187532

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 21     aacatatttgctcaaaat 38
              ||||||||||||||||||
Sbjct: 152569 aacatatttgctcaaaat 152552



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>gb|AC006478.2| Homo sapiens PAC clone RP5-847G17 from 7, complete sequence
          Length = 173239

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 21     aacatatttgctcaaaat 38
              ||||||||||||||||||
Sbjct: 169388 aacatatttgctcaaaat 169405



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>gb|AC100751.6| Mus musculus chromosome 18, clone RP23-249P18, complete sequence
          Length = 253910

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 27     tttgctcaaaataaataa 44
              ||||||||||||||||||
Sbjct: 125599 tttgctcaaaataaataa 125616



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>gb|AC143357.1| Pan troglodytes BAC clone RP43-171L24 from 7, complete sequence
          Length = 181482

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 21    aacatatttgctcaaaat 38
             ||||||||||||||||||
Sbjct: 41648 aacatatttgctcaaaat 41631



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>gb|AC126011.9| Medicago truncatula clone mth2-24f16, complete sequence
          Length = 92933

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 27    tttgctcaaaataaataa 44
             ||||||||||||||||||
Sbjct: 91446 tttgctcaaaataaataa 91463



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>emb|AL049732.11|HSDA14C6 Human DNA sequence from clone RP6-14C6 on chromosome Xp11.21-11.23
             Contains  the 3' end of the PFKFB1 gene for
             6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1, and
             the TRO gene for trophinin, complete sequence
          Length = 103115

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 24    atatttgctcaaaataaa 41
             ||||||||||||||||||
Sbjct: 60094 atatttgctcaaaataaa 60111



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>emb|BX571865.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              7/17
          Length = 348813

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 24     atatttgctcaaaataaa 41
              ||||||||||||||||||
Sbjct: 340742 atatttgctcaaaataaa 340759



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>emb|AL033391.1|CAC20C1 C.albicans cosmid Ca20C1
          Length = 37968

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 24    atatttgctcaaaataaa 41
             ||||||||||||||||||
Sbjct: 37392 atatttgctcaaaataaa 37375



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>gb|AC108877.2| Drosophila melanogaster 3L BAC RP98-17L24 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 163709

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 13    aaatacccaacatatttg 30
             ||||||||||||||||||
Sbjct: 88352 aaatacccaacatatttg 88369



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>gb|AC023751.3| Drosophila melanogaster 3L BAC RP98-31C17 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 187437

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 13     aaatacccaacatatttg 30
              ||||||||||||||||||
Sbjct: 172171 aaatacccaacatatttg 172188



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>gb|AC007541.9| Homo sapiens 12q24.1 BAC RPCI11-412D9 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 143444

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 23    catatttgctcaaaataaataa 44
             |||||||||| |||||||||||
Sbjct: 83828 catatttgcttaaaataaataa 83849



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>gb|AF332093.1|AF332093 White spot syndrome virus, complete genome
          Length = 305107

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 12    taaatacccaacatattt 29
             ||||||||||||||||||
Sbjct: 15997 taaatacccaacatattt 15980



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>gb|AC019179.4|AC019179 Homo sapiens BAC clone RP11-240A16 from 4, complete sequence
          Length = 196721

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 27     tttgctcaaaataaataa 44
              ||||||||||||||||||
Sbjct: 175863 tttgctcaaaataaataa 175846



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>emb|AL670860.6| Mouse DNA sequence from clone RP23-50K11 on chromosome 2, complete
             sequence
          Length = 83914

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 27    tttgctcaaaataaataa 44
             ||||||||||||||||||
Sbjct: 75795 tttgctcaaaataaataa 75812



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>gb|AC053523.5| Homo sapiens BAC clone RP11-563J6 from 2, complete sequence
          Length = 172405

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 27     tttgctcaaaataaataa 44
              ||||||||||||||||||
Sbjct: 163085 tttgctcaaaataaataa 163068



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>gb|AF369029.2| White spot syndrome virus, complete genome
          Length = 292967

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 12    taaatacccaacatattt 29
             ||||||||||||||||||
Sbjct: 64953 taaatacccaacatattt 64936



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>dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0592G05
          Length = 146220

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 27     tttgctcaaaataaataa 44
              ||||||||||||||||||
Sbjct: 114507 tttgctcaaaataaataa 114524



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>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1033B05
          Length = 138882

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 27    tttgctcaaaataaataa 44
             ||||||||||||||||||
Sbjct: 24890 tttgctcaaaataaataa 24907



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>gb|AC163632.3| Mus musculus BAC clone RP23-339H2 from chromosome 16, complete sequence
          Length = 190341

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 23    catatttgctcaaaataaataa 44
             ||||||||| ||||||||||||
Sbjct: 38930 catatttgcccaaaataaataa 38951



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>emb|AL929213.5| Zebrafish DNA sequence from clone CH211-144A19, complete sequence
          Length = 169897

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 27     tttgctcaaaataaataa 44
              ||||||||||||||||||
Sbjct: 119581 tttgctcaaaataaataa 119598



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>gb|AC002464.1|AC002464 Human BAC clone CTA-331P3, complete sequence
          Length = 123805

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 27     tttgctcaaaataaataa 44
              ||||||||||||||||||
Sbjct: 109204 tttgctcaaaataaataa 109221



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>gb|AF440570.1| Shrimp white spot syndrome virus, complete genome
          Length = 307287

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 12    taaatacccaacatattt 29
             ||||||||||||||||||
Sbjct: 49586 taaatacccaacatattt 49569



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>gb|AY897234.1| Shrimp white spot syndrome virus envelope protein (VP108) mRNA,
            complete cds
          Length = 3027

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 12   taaatacccaacatattt 29
            ||||||||||||||||||
Sbjct: 1031 taaatacccaacatattt 1048



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>gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16 of 83 of the complete
              sequence
          Length = 302417

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 13     aaatacccaacatatttg 30
              ||||||||||||||||||
Sbjct: 245181 aaatacccaacatatttg 245198



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>emb|BX000439.11| Mouse DNA sequence from clone RP23-430L20 on chromosome 2, complete
             sequence
          Length = 128388

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 11    ttaaatacccaacatatt 28
             ||||||||||||||||||
Sbjct: 67969 ttaaatacccaacatatt 67952



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>dbj|AP006142.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08A24, TM0250,
             complete sequence
          Length = 104321

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 27    tttgctcaaaataaataa 44
             ||||||||||||||||||
Sbjct: 45385 tttgctcaaaataaataa 45402



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>gb|AF047661.2| Caenorhabditis elegans cosmid M70, complete sequence
          Length = 40314

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 26    atttgctcaaaataaata 43
             ||||||||||||||||||
Sbjct: 24845 atttgctcaaaataaata 24828



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>gb|AC158523.2| Mus musculus BAC clone RP23-371I11 from chromosome 12, complete
             sequence
          Length = 176139

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 21    aacatatttgctcaaaat 38
             ||||||||||||||||||
Sbjct: 78805 aacatatttgctcaaaat 78788



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>emb|AL805920.7| Mouse DNA sequence from clone RP23-162M7 on chromosome X, complete
             sequence
          Length = 125192

 Score = 36.2 bits (18), Expect = 5.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 27    tttgctcaaaataaataa 44
             ||||||||||||||||||
Sbjct: 22903 tttgctcaaaataaataa 22920


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,015,223
Number of Sequences: 3902068
Number of extensions: 1015223
Number of successful extensions: 223362
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 222993
Number of HSP's gapped (non-prelim): 369
length of query: 46
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 26
effective length of database: 17,155,003,908
effective search space: 446030101608
effective search space used: 446030101608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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