ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast34d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY111614.1| Zea mays CL44864_1 mRNA sequence 161 2e-36
2gb|BT019299.1| Zea mays clone Contig972.F mRNA sequence 76 9e-11
3ref|XM_469859.1| Oryza sativa (japonica cultivar-group), mRNA 66 9e-08
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 66 9e-08
5gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genom... 66 9e-08
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 66 9e-08
7dbj|AK101534.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 9e-08
8dbj|AK064205.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 9e-08
9gb|AC166101.4| Mus musculus BAC clone RP23-385P23 from chromosom... 42 1.3
10gb|AC138457.3| Mus musculus BAC clone RP23-358E1 from chromosome... 42 1.3
11gb|AC126429.4| Mus musculus BAC clone RP24-403O23 from chromosom... 42 1.3
12emb|AL160004.18| Human DNA sequence from clone RP5-1068B5 on chr... 42 1.3
13emb|AL139252.8| Human DNA sequence from clone RP4-679K16 on chro... 42 1.3
14dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome 42 1.3
15gb|AY365053.1| Ralstonia eutropha JMP134 plasmid pJP4, complete ... 40 5.2
16gb|AC107725.10| Mus musculus chromosome 5, clone RP23-477O15, co... 40 5.2
17gb|AF461013.1| Klebsiella pneumoniae strain M426 MerR, MerT (mer... 40 5.2
18gb|AY333434.1| Salmonella typhimurium plasmid pU302L, complete s... 40 5.2
19ref|XM_323996.1| Neurospora crassa OR74A predicted protein (NCU0... 40 5.2
20ref|NM_013365.3| Homo sapiens golgi associated, gamma adaptin ea... 40 5.2
21ref|NM_001001560.1| Homo sapiens golgi associated, gamma adaptin... 40 5.2
22gb|BC044629.1| Homo sapiens golgi associated, gamma adaptin ear ... 40 5.2
23ref|XM_954091.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.2
24ref|XM_956817.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.2
25ref|XM_324629.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.2
26gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 5.2
27ref|XM_994570.1| PREDICTED: Mus musculus RNA binding motif prote... 40 5.2
28ref|XM_901661.2| PREDICTED: Mus musculus RNA binding motif prote... 40 5.2
29gb|AC073336.6| Homo sapiens BAC clone RP11-476H24 from 7, comple... 40 5.2
30gb|AF071413.3| Assembled sequence of transposon Tn21 containing ... 40 5.2
31gb|CP000355.1| Ralstonia metallidurans CH34 plasmid pMOL28, comp... 40 5.2
32gb|CP000354.1| Ralstonia metallidurans CH34 plasmid pMOL30, comp... 40 5.2
33emb|Y09025.1|ECMERTREL Enterobacter cloacae DNA, mosaic mercury ... 40 5.2
34gb|AC124431.4| Mus musculus BAC clone RP24-243J21 from chromosom... 40 5.2
35emb|Z83844.5|HS37E16 Human DNA sequence from clone RP1-37E16 on ... 40 5.2
36emb|AL390760.25| Human DNA sequence from clone RP11-370F5 on chr... 40 5.2
37gb|CP000093.1| Ralstonia eutropha JMP134 plasmid 1, complete seq... 40 5.2
38gb|AC158217.4| Mus musculus chromosome 5, clone RP24-377B20, com... 40 5.2
39emb|Z00027.1|ISTN501 Transposon Tn501 from Pseudomonas aeruginos... 40 5.2
40emb|Y10102.1|ECTREMER2 Escherichia coli partial merA gene, merD ... 40 5.2
41emb|Y08992.1|EAMMRTRAN E.agglomerans pKLH272 incomplete unit of ... 40 5.2
42emb|X90708.2|AEPARREPG Ralstonia metallidurans CH34 plasmid pMOL28 40 5.2
43emb|X71400.2|AECZCOP5R Ralstonia metallidurans CH34 plasmid pMOL30 40 5.2
44emb|BX664015.1| Serratia marcescens plasmid R478 40 5.2
45emb|AL807371.1|NC5F3 Neurospora crassa DNA linkage group V cosmi... 40 5.2
46emb|AL513383.1|STYPPHCM1 Salmonella enterica subsp. enterica ser... 40 5.2
47emb|AJ564903.1|UBA564903 Uncultured bacterium IncP-1beta multire... 40 5.2
48emb|AJ551280.1|PSP551280 Pseudomonas sp. A19-1 transposon Tn5060 40 5.2
49emb|AJ418049.1|CFR418049 Citrobacter freundii partial merA gene ... 40 5.2
50emb|AJ251540.1|ALW251540 Acinetobacter lwoffii NC7-1 partial mob... 40 5.2
51emb|AJ250010.1|ALW250010 Acinetobacter lwoffii partial mobilizab... 40 5.2
52emb|AJ851089.1| Uncultured bacterium pRSB107 plasmid 40 5.2
53emb|AL110219.1|HSM800873 Homo sapiens mRNA; cDNA DKFZp434A033 (f... 40 5.2
54dbj|AK122898.1| Homo sapiens cDNA FLJ16562 fis, clone SYNOV40052... 40 5.2
55dbj|AK095427.1| Homo sapiens cDNA FLJ38108 fis, clone D3OST20016... 40 5.2
56emb|CR609702.1| full-length cDNA clone CS0DG007YE15 of B cells (... 40 5.2
57dbj|AK092417.1| Homo sapiens cDNA FLJ35098 fis, clone PLACE60062... 40 5.2
58dbj|AK075256.1| Homo sapiens cDNA FLJ90775 fis, clone THYRO10010... 40 5.2
59emb|CR596724.1| full-length cDNA clone CS0DB008YM24 of Neuroblas... 40 5.2
60dbj|AK165277.1| Mus musculus 6 days neonate spleen cDNA, RIKEN f... 40 5.2
61gb|DQ125241.2| Escherichia coli integron In117 IntI1 (intI1), Es... 40 5.2
62gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 5.2
63gb|AC153923.4| Mus musculus 6 BAC RP23-82I13 (Roswell Park Cance... 40 5.2
64gb|AF348706.1|AF348706 Shigella flexneri large virulence plasmid... 40 5.2
65gb|AF457211.1| Escherichia coli Tn5075, complete sequence 40 5.2
66gb|DQ302790.1| Spiromyces aspiralis isolate AFTOL-ID 185 RNA pol... 40 5.2
67gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.2
68gb|AF190862.1|AF190862 Homo sapiens ADP-ribosylation factor bind... 40 5.2
69gb|AF233521.1|AF233521 Homo sapiens Golgi-associated, gamma-adap... 40 5.2
70gb|AF218584.1|AF218584 Homo sapiens GGA1 mRNA, complete cds 40 5.2
71dbj|AK173741.1| Ciona intestinalis cDNA, clone:cieg011n06, full ... 40 5.2
72gb|J01730.1|R1004 Plasmid R100 putative (insA), putative (insB),... 40 5.2
73emb|CR456493.1| Homo sapiens GGA1 full length open reading frame... 40 5.2
74emb|CT025832.1| Acinetobacter baumannii str. AYE. Genomics of Mu... 40 5.2
75gb|AY509004.1| Salmonella enterica subsp. enterica serovar Chole... 40 5.2
76gb|U80214.1|PSU80214 Pseudomonas stutzeri plasmid pPB MerR (merR... 40 5.2
77gb|AC149216.5| Mus musculus BAC clone RP24-194H8 from 18, comple... 40 5.2
78gb|K03089.1|NR1MER Plasmid NR1 mercury resistance (mer) operon 40 5.2
79gb|DQ065837.1| Burkholderia cepacia strain 2a plasmid pIJB1, com... 40 5.2
80emb|AL591433.6| Mouse DNA sequence from clone RP23-268N22 on chr... 40 5.2
81dbj|AP000342.1| Plasmid R100 DNA, complete sequence 40 5.2 
>gb|AY111614.1| Zea mays CL44864_1 mRNA sequence
          Length = 727

 Score =  161 bits (81), Expect = 2e-36
 Identities = 150/173 (86%)
 Strand = Plus / Plus

                                                                       
Query: 214 gggaggtggtaggtgtcgagctgccagtacttctgcttcaccccctcccacacctcctcc 273
           ||||||| ||||||||| || |||||||||||| ||||||| |||| ||| |||||||||
Sbjct: 174 gggaggtagtaggtgtccagttgccagtacttccgcttcacgcccttccagacctcctcc 233

                                                                       
Query: 274 ttgaggcagtccttgacggggagggggatgaactgcgtcgagtacccgaggctcgccagc 333
              ||||| || ||||| || || ||||||||||||||||||||||| ||| |||| |||
Sbjct: 234 gccaggcaatctttgaccggcagagggatgaactgcgtcgagtacccaaggttcgcgagc 293

                                                                
Query: 334 tccagcgccaccagctggcagtacaccacgtggaagaaggcgttgtcgccgca 386
           ||||||||||| |||||||| |||||  |||||||||| ||||||||||||||
Sbjct: 294 tccagcgccacgagctggcaatacacggcgtggaagaacgcgttgtcgccgca 346
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>gb|BT019299.1| Zea mays clone Contig972.F mRNA sequence
          Length = 928

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 119/146 (81%)
 Strand = Plus / Plus

                                                                       
Query: 214 gggaggtggtaggtgtcgagctgccagtacttctgcttcaccccctcccacacctcctcc 273
           ||||||| ||||| |||  | |||||||||||| |||||||||||| ||| |||||||||
Sbjct: 435 gggaggtagtaggggtcccgttgccagtacttccgcttcacccccttccaaacctcctcc 494

                                                                       
Query: 274 ttgaggcagtccttgacggggagggggatgaactgcgtcgagtacccgaggctcgccagc 333
              ||| | |  ||||| ||||  ||||||||||||||||||||||| ||| || | |||
Sbjct: 495 gccagggaatttttgaccgggaaagggatgaactgcgtcgagtacccaaggttcccgagc 554

                                     
Query: 334 tccagcgccaccagctggcagtacac 359
           ||| |||| || || ||||| |||||
Sbjct: 555 tcccgcgcgacgaggtggcaatacac 580
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>ref|XM_469859.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1008

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 147/185 (79%)
 Strand = Plus / Minus

                                                                       
Query: 199 tctgcctggcagacggggaggtggtaggtgtcgagctgccagtacttctgcttcaccccc 258
           ||||| ||||| || ||||||||||| || || |  |||||||| |||||||||||||| 
Sbjct: 989 tctgcttggcaaactgggaggtggtaagtatccaattgccagtatttctgcttcacccca 930

                                                                       
Query: 259 tcccacacctcctccttgaggcagtccttgacggggagggggatgaactgcgtcgagtac 318
           | ||| |  |||||    || || || ||||| ||||| ||||||||||| |||||||| 
Sbjct: 929 ttccatatttcctctgaaagacaatctttgactgggagcgggatgaactgtgtcgagtag 870

                                                                       
Query: 319 ccgaggctcgccagctccagcgccaccagctggcagtacaccacgtggaagaaggcgttg 378
           || ||  | |||| ||| | ||| || |||||||| ||||| |||||||||||||| || 
Sbjct: 869 ccaagatttgccaactctaacgctacgagctggcaatacacaacgtggaagaaggcatta 810

                
Query: 379 tcgcc 383
           |||||
Sbjct: 809 tcgcc 805
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 147/185 (79%)
 Strand = Plus / Plus

                                                                            
Query: 199      tctgcctggcagacggggaggtggtaggtgtcgagctgccagtacttctgcttcaccccc 258
                ||||| ||||| || ||||||||||| || || |  |||||||| |||||||||||||| 
Sbjct: 31172790 tctgcttggcaaactgggaggtggtaagtatccaattgccagtatttctgcttcacccca 31172849

                                                                            
Query: 259      tcccacacctcctccttgaggcagtccttgacggggagggggatgaactgcgtcgagtac 318
                | ||| |  |||||    || || || ||||| ||||| ||||||||||| |||||||| 
Sbjct: 31172850 ttccatatttcctctgaaagacaatctttgactgggagcgggatgaactgtgtcgagtag 31172909

                                                                            
Query: 319      ccgaggctcgccagctccagcgccaccagctggcagtacaccacgtggaagaaggcgttg 378
                || ||  | |||| ||| | ||| || |||||||| ||||| |||||||||||||| || 
Sbjct: 31172910 ccaagatttgccaactctaacgctacgagctggcaatacacaacgtggaagaaggcatta 31172969

                     
Query: 379      tcgcc 383
                |||||
Sbjct: 31172970 tcgcc 31172974
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>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete
             sequence
          Length = 128017

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 147/185 (79%)
 Strand = Plus / Plus

                                                                         
Query: 199   tctgcctggcagacggggaggtggtaggtgtcgagctgccagtacttctgcttcaccccc 258
             ||||| ||||| || ||||||||||| || || |  |||||||| |||||||||||||| 
Sbjct: 93431 tctgcttggcaaactgggaggtggtaagtatccaattgccagtatttctgcttcacccca 93490

                                                                         
Query: 259   tcccacacctcctccttgaggcagtccttgacggggagggggatgaactgcgtcgagtac 318
             | ||| |  |||||    || || || ||||| ||||| ||||||||||| |||||||| 
Sbjct: 93491 ttccatatttcctctgaaagacaatctttgactgggagcgggatgaactgtgtcgagtag 93550

                                                                         
Query: 319   ccgaggctcgccagctccagcgccaccagctggcagtacaccacgtggaagaaggcgttg 378
             || ||  | |||| ||| | ||| || |||||||| ||||| |||||||||||||| || 
Sbjct: 93551 ccaagatttgccaactctaacgctacgagctggcaatacacaacgtggaagaaggcatta 93610

                  
Query: 379   tcgcc 383
             |||||
Sbjct: 93611 tcgcc 93615
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 147/185 (79%)
 Strand = Plus / Plus

                                                                            
Query: 199      tctgcctggcagacggggaggtggtaggtgtcgagctgccagtacttctgcttcaccccc 258
                ||||| ||||| || ||||||||||| || || |  |||||||| |||||||||||||| 
Sbjct: 31263313 tctgcttggcaaactgggaggtggtaagtatccaattgccagtatttctgcttcacccca 31263372

                                                                            
Query: 259      tcccacacctcctccttgaggcagtccttgacggggagggggatgaactgcgtcgagtac 318
                | ||| |  |||||    || || || ||||| ||||| ||||||||||| |||||||| 
Sbjct: 31263373 ttccatatttcctctgaaagacaatctttgactgggagcgggatgaactgtgtcgagtag 31263432

                                                                            
Query: 319      ccgaggctcgccagctccagcgccaccagctggcagtacaccacgtggaagaaggcgttg 378
                || ||  | |||| ||| | ||| || |||||||| ||||| |||||||||||||| || 
Sbjct: 31263433 ccaagatttgccaactctaacgctacgagctggcaatacacaacgtggaagaaggcatta 31263492

                     
Query: 379      tcgcc 383
                |||||
Sbjct: 31263493 tcgcc 31263497
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>dbj|AK101534.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048C14, full
            insert sequence
          Length = 1492

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 147/185 (79%)
 Strand = Plus / Minus

                                                                        
Query: 199  tctgcctggcagacggggaggtggtaggtgtcgagctgccagtacttctgcttcaccccc 258
            ||||| ||||| || ||||||||||| || || |  |||||||| |||||||||||||| 
Sbjct: 1021 tctgcttggcaaactgggaggtggtaagtatccaattgccagtatttctgcttcacccca 962

                                                                        
Query: 259  tcccacacctcctccttgaggcagtccttgacggggagggggatgaactgcgtcgagtac 318
            | ||| |  |||||    || || || ||||| ||||| ||||||||||| |||||||| 
Sbjct: 961  ttccatatttcctctgaaagacaatctttgactgggagcgggatgaactgtgtcgagtag 902

                                                                        
Query: 319  ccgaggctcgccagctccagcgccaccagctggcagtacaccacgtggaagaaggcgttg 378
            || ||  | |||| ||| | ||| || |||||||| ||||| |||||||||||||| || 
Sbjct: 901  ccaagatttgccaactctaacgctacgagctggcaatacacaacgtggaagaaggcatta 842

                 
Query: 379  tcgcc 383
            |||||
Sbjct: 841  tcgcc 837
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>dbj|AK064205.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-E04, full
            insert sequence
          Length = 1473

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 147/185 (79%)
 Strand = Plus / Minus

                                                                        
Query: 199  tctgcctggcagacggggaggtggtaggtgtcgagctgccagtacttctgcttcaccccc 258
            ||||| ||||| || ||||||||||| || || |  |||||||| |||||||||||||| 
Sbjct: 1008 tctgcttggcaaactgggaggtggtaagtatccaattgccagtatttctgcttcacccca 949

                                                                        
Query: 259  tcccacacctcctccttgaggcagtccttgacggggagggggatgaactgcgtcgagtac 318
            | ||| |  |||||    || || || ||||| ||||| ||||||||||| |||||||| 
Sbjct: 948  ttccatatttcctctgaaagacaatctttgactgggagcgggatgaactgtgtcgagtag 889

                                                                        
Query: 319  ccgaggctcgccagctccagcgccaccagctggcagtacaccacgtggaagaaggcgttg 378
            || ||  | |||| ||| | ||| || |||||||| ||||| |||||||||||||| || 
Sbjct: 888  ccaagatttgccaactctaacgctacgagctggcaatacacaacgtggaagaaggcatta 829

                 
Query: 379  tcgcc 383
            |||||
Sbjct: 828  tcgcc 824
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>gb|AC166101.4| Mus musculus BAC clone RP23-385P23 from chromosome 6, complete sequence
          Length = 223116

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 251   tcaccccctcccacacctcct 271
             |||||||||||||||||||||
Sbjct: 17269 tcaccccctcccacacctcct 17249
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>gb|AC138457.3| Mus musculus BAC clone RP23-358E1 from chromosome 19, complete sequence
          Length = 237854

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 260    cccacacctcctccttgaggcagtc 284
              ||||| |||||||||||||||||||
Sbjct: 121910 cccacccctcctccttgaggcagtc 121934
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>gb|AC126429.4| Mus musculus BAC clone RP24-403O23 from chromosome 6, complete sequence
          Length = 152532

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 251   tcaccccctcccacacctcct 271
             |||||||||||||||||||||
Sbjct: 58063 tcaccccctcccacacctcct 58083
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>emb|AL160004.18| Human DNA sequence from clone RP5-1068B5 on chromosome 1q42.11-43
             Contains a pseudogene similar to part of ribosomal protein
             L21 (RPL21), the ACTA1 gene for actin, alpha 1, skeletal
             muscle, the 3' end of the NUP133 gene for nucleoporin
             133kDa and two CpG islands, complete sequence
          Length = 86173

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 251   tcaccccctcccacacctcct 271
             |||||||||||||||||||||
Sbjct: 84567 tcaccccctcccacacctcct 84547
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>emb|AL139252.8| Human DNA sequence from clone RP4-679K16 on chromosome 1q42.13-43
           Contains part of the NUP133 gene for nucleoporin 133kDa,
           complete sequence
          Length = 25069

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 251 tcaccccctcccacacctcct 271
           |||||||||||||||||||||
Sbjct: 394 tcaccccctcccacacctcct 374
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>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 257    cctcccacacctcctccttga 277
              |||||||||||||||||||||
Sbjct: 799505 cctcccacacctcctccttga 799485
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>gb|AY365053.1| Ralstonia eutropha JMP134 plasmid pJP4, complete sequence
          Length = 87688

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   cgccagctccagcgccacca 346
             ||||||||||||||||||||
Sbjct: 53541 cgccagctccagcgccacca 53560
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>gb|AC107725.10| Mus musculus chromosome 5, clone RP23-477O15, complete sequence
          Length = 169321

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   ccccctcccacacctcctcc 273
             ||||||||||||||||||||
Sbjct: 67192 ccccctcccacacctcctcc 67173
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>gb|AF461013.1| Klebsiella pneumoniae strain M426 MerR, MerT (merT), MerP (merP),
            MerC (merC), MerA (merA), MerD (merD), and URF-1 genes,
            complete cds
          Length = 4256

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  cgccagctccagcgccacca 346
            ||||||||||||||||||||
Sbjct: 2611 cgccagctccagcgccacca 2592
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>gb|AY333434.1| Salmonella typhimurium plasmid pU302L, complete sequence
          Length = 84514

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   cgccagctccagcgccacca 346
             ||||||||||||||||||||
Sbjct: 68016 cgccagctccagcgccacca 67997
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>ref|XM_323996.1| Neurospora crassa OR74A predicted protein (NCU04641.1) partial mRNA
          Length = 1674

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ccccctcccacacctcctcc 273
           ||||||||||||||||||||
Sbjct: 574 ccccctcccacacctcctcc 555
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>ref|NM_013365.3| Homo sapiens golgi associated, gamma adaptin ear containing, ARF
            binding protein 1 (GGA1), transcript variant 1, mRNA
          Length = 3163

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  ccagctccagcgccaccagc 348
            ||||||||||||||||||||
Sbjct: 1768 ccagctccagcgccaccagc 1787
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>ref|NM_001001560.1| Homo sapiens golgi associated, gamma adaptin ear containing, ARF
            binding protein 1 (GGA1), transcript variant 2, mRNA
          Length = 2898

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  ccagctccagcgccaccagc 348
            ||||||||||||||||||||
Sbjct: 1507 ccagctccagcgccaccagc 1526
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>gb|BC044629.1| Homo sapiens golgi associated, gamma adaptin ear containing, ARF
            binding protein 1, transcript variant 2, mRNA (cDNA clone
            MGC:52130 IMAGE:5796877), complete cds
          Length = 2545

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  ccagctccagcgccaccagc 348
            ||||||||||||||||||||
Sbjct: 1158 ccagctccagcgccaccagc 1177
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>ref|XM_954091.1| Neurospora crassa OR74A hypothetical protein (NCU04641.1) partial
           mRNA
          Length = 1674

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 ccccctcccacacctcctcc 273
           ||||||||||||||||||||
Sbjct: 574 ccccctcccacacctcctcc 555
to top
>ref|XM_956817.1| Neurospora crassa OR74A hypothetical protein (NCU05273.1) partial
           mRNA
          Length = 1935

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 267 ctcctccttgaggcagtcct 286
           ||||||||||||||||||||
Sbjct: 216 ctcctccttgaggcagtcct 235
to top
>ref|XM_324629.1| Neurospora crassa OR74A hypothetical protein (NCU05273.1) partial
           mRNA
          Length = 1935

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 267 ctcctccttgaggcagtcct 286
           ||||||||||||||||||||
Sbjct: 216 ctcctccttgaggcagtcct 235
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 327     cgccagctccagcgccacca 346
               ||||||||||||||||||||
Sbjct: 6164233 cgccagctccagcgccacca 6164214
to top
>ref|XM_994570.1| PREDICTED: Mus musculus RNA binding motif protein 22, transcript
            variant 1 (Rbm22), mRNA
          Length = 3717

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 243  cttctgcttcaccccctccc 262
            ||||||||||||||||||||
Sbjct: 3320 cttctgcttcaccccctccc 3301
to top
>ref|XM_901661.2| PREDICTED: Mus musculus RNA binding motif protein 22, transcript
            variant 3 (Rbm22), mRNA
          Length = 3717

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 243  cttctgcttcaccccctccc 262
            ||||||||||||||||||||
Sbjct: 3320 cttctgcttcaccccctccc 3301
to top
>gb|AC073336.6| Homo sapiens BAC clone RP11-476H24 from 7, complete sequence
          Length = 166261

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    ccctcccacacctcctcctt 275
              ||||||||||||||||||||
Sbjct: 122380 ccctcccacacctcctcctt 122399
to top
>gb|AF071413.3| Assembled sequence of transposon Tn21 containing transposition genes,
             the integron In2, and the mercury resistance operon
          Length = 19672

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   cgccagctccagcgccacca 346
             ||||||||||||||||||||
Sbjct: 17130 cgccagctccagcgccacca 17149
to top
>gb|CP000355.1| Ralstonia metallidurans CH34 plasmid pMOL28, complete sequence
          Length = 171459

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 cgccagctccagcgccacca 346
           ||||||||||||||||||||
Sbjct: 976 cgccagctccagcgccacca 957
to top
>gb|CP000354.1| Ralstonia metallidurans CH34 plasmid pMOL30, complete sequence
          Length = 233720

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    cgccagctccagcgccacca 346
              ||||||||||||||||||||
Sbjct: 224821 cgccagctccagcgccacca 224802
to top
>emb|Y09025.1|ECMERTREL Enterobacter cloacae DNA, mosaic mercury resistance transposable
            element (mer-operon)
          Length = 8012

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  cgccagctccagcgccacca 346
            ||||||||||||||||||||
Sbjct: 2596 cgccagctccagcgccacca 2577
to top
>gb|AC124431.4| Mus musculus BAC clone RP24-243J21 from chromosome 18, complete
             sequence
          Length = 143099

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   tcaccccctcccacacctcc 270
             ||||||||||||||||||||
Sbjct: 72280 tcaccccctcccacacctcc 72261
to top
>emb|Z83844.5|HS37E16 Human DNA sequence from clone RP1-37E16 on chromosome 22 Contains the
            3' part of the gene for a novel VHS domain containing
            protein similar to predicted worm and human proteins, the
            SH3BP1 gene for SH3-domain binding protein 1, the gene
            for a novel protein similar to nitrophenylphosphatases
            from various organisms, the LGALS1 gene for soluble
            galactoside-binding lectin 1, a novel gene and the gene
            for a novel protein similar to mouse RIP3 (P116
            Rho-interacting protein) and rat RB109, complete sequence
          Length = 166181

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  ccagctccagcgccaccagc 348
            ||||||||||||||||||||
Sbjct: 4924 ccagctccagcgccaccagc 4943
to top
>emb|AL390760.25| Human DNA sequence from clone RP11-370F5 on chromosome 9 Contains the 3'
              emd of novel gene (MGC11115), the NINJ1 gene for ninjurin
              1, a novel gene, the 5' end of the PRKWNK2 gene for protein
              kinase, lysine deficient 2 (WNK2, NY-CO-43, SDCCAG43,
              P/OKcl.13) and two CpG islands, complete sequence
          Length = 175797

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    cccacacctcctccttgagg 279
              ||||||||||||||||||||
Sbjct: 137798 cccacacctcctccttgagg 137779
to top
>gb|CP000093.1| Ralstonia eutropha JMP134 plasmid 1, complete sequence
          Length = 87688

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   cgccagctccagcgccacca 346
             ||||||||||||||||||||
Sbjct: 53541 cgccagctccagcgccacca 53560
to top
>gb|AC158217.4| Mus musculus chromosome 5, clone RP24-377B20, complete sequence
          Length = 160008

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   ccccctcccacacctcctcc 273
             ||||||||||||||||||||
Sbjct: 25728 ccccctcccacacctcctcc 25747
to top
>emb|Z00027.1|ISTN501 Transposon Tn501 from Pseudomonas aeruginosa plasmid pVS1 encoding
            mercuric ion resistance determinant. Genes: merR
            (regulation), merT and merP (transport), merA
            (reductase), merD (not known); two open reading frames of
            unknown function (possibly one is merE); res site, tnpR
            and tnpA (transposition)
          Length = 8355

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  cgccagctccagcgccacca 346
            ||||||||||||||||||||
Sbjct: 2187 cgccagctccagcgccacca 2168
to top
>emb|Y10102.1|ECTREMER2 Escherichia coli partial merA gene, merD gene and 3 ORF's
          Length = 3624

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 cgccagctccagcgccacca 346
           ||||||||||||||||||||
Sbjct: 273 cgccagctccagcgccacca 254
to top
>emb|Y08992.1|EAMMRTRAN E.agglomerans pKLH272 incomplete unit of mosaic mercury resistance
            transposon
          Length = 4824

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  cgccagctccagcgccacca 346
            ||||||||||||||||||||
Sbjct: 2712 cgccagctccagcgccacca 2693
to top
>emb|X90708.2|AEPARREPG Ralstonia metallidurans CH34 plasmid pMOL28
          Length = 171461

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    cgccagctccagcgccacca 346
              ||||||||||||||||||||
Sbjct: 143760 cgccagctccagcgccacca 143779
to top
>emb|X71400.2|AECZCOP5R Ralstonia metallidurans CH34 plasmid pMOL30
          Length = 233755

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    cgccagctccagcgccacca 346
              ||||||||||||||||||||
Sbjct: 128751 cgccagctccagcgccacca 128770
to top
>emb|BX664015.1| Serratia marcescens plasmid R478
          Length = 274762

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    cgccagctccagcgccacca 346
              ||||||||||||||||||||
Sbjct: 107530 cgccagctccagcgccacca 107549
to top
>emb|AL807371.1|NC5F3 Neurospora crassa DNA linkage group V cosmid contig 5F3
          Length = 83192

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   ccccctcccacacctcctcc 273
             ||||||||||||||||||||
Sbjct: 36001 ccccctcccacacctcctcc 35982
to top
>emb|AL513383.1|STYPPHCM1 Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1
          Length = 218160

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    cgccagctccagcgccacca 346
              ||||||||||||||||||||
Sbjct: 172815 cgccagctccagcgccacca 172834



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    cgccagctccagcgccacca 346
              ||||||||||||||||||||
Sbjct: 117063 cgccagctccagcgccacca 117044
to top
>emb|AJ564903.1|UBA564903 Uncultured bacterium IncP-1beta multiresistance plasmid pB10
          Length = 64508

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   cgccagctccagcgccacca 346
             ||||||||||||||||||||
Sbjct: 60697 cgccagctccagcgccacca 60716
to top
>emb|AJ551280.1|PSP551280 Pseudomonas sp. A19-1 transposon Tn5060
          Length = 8667

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  cgccagctccagcgccacca 346
            ||||||||||||||||||||
Sbjct: 6125 cgccagctccagcgccacca 6144
to top
>emb|AJ418049.1|CFR418049 Citrobacter freundii partial merA gene for putative mercuric
           reductase
          Length = 1144

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 cgccagctccagcgccacca 346
           ||||||||||||||||||||
Sbjct: 420 cgccagctccagcgccacca 401
to top
>emb|AJ251540.1|ALW251540 Acinetobacter lwoffii NC7-1 partial mobilizable plasmid pKLH103
           including pKLH1-like transposon merA-D region
          Length = 1686

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 cgccagctccagcgccacca 346
           ||||||||||||||||||||
Sbjct: 168 cgccagctccagcgccacca 149
to top
>emb|AJ250010.1|ALW250010 Acinetobacter lwoffii partial mobilizable plasmid pKLH102 including
           pKLH1-like transposon merA gene (partial), strain TC41-3
          Length = 661

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 cgccagctccagcgccacca 346
           ||||||||||||||||||||
Sbjct: 68  cgccagctccagcgccacca 49
to top
>emb|AJ851089.1| Uncultured bacterium pRSB107 plasmid
          Length = 120592

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   cgccagctccagcgccacca 346
             ||||||||||||||||||||
Sbjct: 31367 cgccagctccagcgccacca 31348
to top
>emb|AL110219.1|HSM800873 Homo sapiens mRNA; cDNA DKFZp434A033 (from clone DKFZp434A033)
          Length = 2709

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  ccagctccagcgccaccagc 348
            ||||||||||||||||||||
Sbjct: 1314 ccagctccagcgccaccagc 1333
to top
>dbj|AK122898.1| Homo sapiens cDNA FLJ16562 fis, clone SYNOV4005256, highly  similar
            to ADP-ribosylation factor binding protein GGA1
          Length = 3205

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  ccagctccagcgccaccagc 348
            ||||||||||||||||||||
Sbjct: 1836 ccagctccagcgccaccagc 1855
to top
>dbj|AK095427.1| Homo sapiens cDNA FLJ38108 fis, clone D3OST2001670, highly similar
           to ADP-ribosylation factor binding protein GGA1
          Length = 2049

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 ccagctccagcgccaccagc 348
           ||||||||||||||||||||
Sbjct: 680 ccagctccagcgccaccagc 699
to top
>emb|CR609702.1| full-length cDNA clone CS0DG007YE15 of B cells (Ramos cell line) of
            Homo sapiens (human)
          Length = 2735

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  ccagctccagcgccaccagc 348
            ||||||||||||||||||||
Sbjct: 1426 ccagctccagcgccaccagc 1445
to top
>dbj|AK092417.1| Homo sapiens cDNA FLJ35098 fis, clone PLACE6006266, highly similar
           to ADP-ribosylation factor binding protein GGA1
          Length = 1806

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 ccagctccagcgccaccagc 348
           ||||||||||||||||||||
Sbjct: 437 ccagctccagcgccaccagc 456
to top
>dbj|AK075256.1| Homo sapiens cDNA FLJ90775 fis, clone THYRO1001071, highly similar to
            ADP-ribosylation factor binding protein GGA1
          Length = 3139

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  ccagctccagcgccaccagc 348
            ||||||||||||||||||||
Sbjct: 1768 ccagctccagcgccaccagc 1787
to top
>emb|CR596724.1| full-length cDNA clone CS0DB008YM24 of Neuroblastoma Cot
           10-normalized of Homo sapiens (human)
          Length = 2058

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 329 ccagctccagcgccaccagc 348
           ||||||||||||||||||||
Sbjct: 716 ccagctccagcgccaccagc 735
to top
>dbj|AK165277.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched
            library, clone:F430008C17 product:hypothetical Zn-finger,
            C-x8-C-x5-C-x3-H type containing protein, full insert
            sequence
          Length = 3542

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 243  cttctgcttcaccccctccc 262
            ||||||||||||||||||||
Sbjct: 3289 cttctgcttcaccccctccc 3270
to top
>gb|DQ125241.2| Escherichia coli integron In117 IntI1 (intI1), EstX (estX), AadA1
             (aadA1), QacEdelta1 (qacEdelta1), Sul1 (sul1), putative
             recombinase, beta lactamase CTX-M-2 (blaCTX-M-2),
             ORF3-QacEdelta1 fusion protein, Sul1 (sul1), IstB (istB),
             IstA (istA), TniBdelta1 (tniBdelta1), TniA (tniA), unknown
             (merE), MerD (merD), MerA (merA), MerC (merC), MerP
             (merP), and MerT (merT) genes, complete cds, and unknown
             genes
          Length = 20032

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   cgccagctccagcgccacca 346
             ||||||||||||||||||||
Sbjct: 17947 cgccagctccagcgccacca 17966
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 364     tggaagaaggcgttgtcgcc 383
               ||||||||||||||||||||
Sbjct: 1572612 tggaagaaggcgttgtcgcc 1572631
to top
>gb|AC153923.4| Mus musculus 6 BAC RP23-82I13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 248275

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    caccccctcccacacctcct 271
              ||||||||||||||||||||
Sbjct: 147298 caccccctcccacacctcct 147317
to top
>gb|AF348706.1|AF348706 Shigella flexneri large virulence plasmid pWR501, complete plasmid
              sequence
          Length = 221851

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    cgccagctccagcgccacca 346
              ||||||||||||||||||||
Sbjct: 200899 cgccagctccagcgccacca 200880
to top
>gb|AF457211.1| Escherichia coli Tn5075, complete sequence
          Length = 11298

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  cgccagctccagcgccacca 346
            ||||||||||||||||||||
Sbjct: 3870 cgccagctccagcgccacca 3851
to top
>gb|DQ302790.1| Spiromyces aspiralis isolate AFTOL-ID 185 RNA polymerase II second
           largest subunit precursor (RPB2) gene, partial cds
          Length = 3174

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 52  ggcgtgacctgatcctgaac 71
           ||||||||||||||||||||
Sbjct: 971 ggcgtgacctgatcctgaac 952
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 230     cgagctgccagtacttctgc 249
               ||||||||||||||||||||
Sbjct: 4145938 cgagctgccagtacttctgc 4145919
to top
>gb|AF190862.1|AF190862 Homo sapiens ADP-ribosylation factor binding protein GGA1 (GGA1)
            mRNA, complete cds
          Length = 2800

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  ccagctccagcgccaccagc 348
            ||||||||||||||||||||
Sbjct: 1418 ccagctccagcgccaccagc 1437
to top
>gb|AF233521.1|AF233521 Homo sapiens Golgi-associated, gamma-adaptin ear containing,
            ARF-binding protein 1 (GGA1) gene, complete cds
          Length = 2040

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  ccagctccagcgccaccagc 348
            ||||||||||||||||||||
Sbjct: 1425 ccagctccagcgccaccagc 1444
to top
>gb|AF218584.1|AF218584 Homo sapiens GGA1 mRNA, complete cds
          Length = 1924

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  ccagctccagcgccaccagc 348
            ||||||||||||||||||||
Sbjct: 1407 ccagctccagcgccaccagc 1426
to top
>dbj|AK173741.1| Ciona intestinalis cDNA, clone:cieg011n06, full insert sequence
          Length = 2880

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 12   gtttcatcggaaccacaatc 31
            ||||||||||||||||||||
Sbjct: 1293 gtttcatcggaaccacaatc 1312
to top
>gb|J01730.1|R1004 Plasmid R100 putative (insA), putative (insB), merR (merR), putative
            (merT), merC (merC), mercuric reductase (merA), and
            putative (merD) genes, complete cds
          Length = 5747

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  cgccagctccagcgccacca 346
            ||||||||||||||||||||
Sbjct: 3471 cgccagctccagcgccacca 3452
to top
>emb|CR456493.1| Homo sapiens GGA1 full length open reading frame (ORF) cDNA clone
            (cDNA clone C22ORF:pGEM.GGA1)
          Length = 2196

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  ccagctccagcgccaccagc 348
            ||||||||||||||||||||
Sbjct: 1590 ccagctccagcgccaccagc 1609
to top
>emb|CT025832.1| Acinetobacter baumannii str. AYE. Genomics of Multi-Drug Resistance in
             Acinetobacter baumannii
          Length = 100001

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   cgccagctccagcgccacca 346
             ||||||||||||||||||||
Sbjct: 56013 cgccagctccagcgccacca 56032
to top
>gb|AY509004.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
             plasmid pSC138, complete sequence
          Length = 138742

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   cgccagctccagcgccacca 346
             ||||||||||||||||||||
Sbjct: 16696 cgccagctccagcgccacca 16677
to top
>gb|U80214.1|PSU80214 Pseudomonas stutzeri plasmid pPB MerR (merR), MerT (merT), MerP
            (merP), MerA (merA), MerD (merD), Urf1 (urf1), Urf2
            (urf2), delta-tniA-like protein, and DNA-invertase genes,
            complete cds; and delta-tniR pseudogene, complete
            sequence
          Length = 6769

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  cgccagctccagcgccacca 346
            ||||||||||||||||||||
Sbjct: 2222 cgccagctccagcgccacca 2203
to top
>gb|AC149216.5| Mus musculus BAC clone RP24-194H8 from 18, complete sequence
          Length = 193186

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    cttctgcttcaccccctccc 262
              ||||||||||||||||||||
Sbjct: 174108 cttctgcttcaccccctccc 174127
to top
>gb|K03089.1|NR1MER Plasmid NR1 mercury resistance (mer) operon
          Length = 3763

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  cgccagctccagcgccacca 346
            ||||||||||||||||||||
Sbjct: 2607 cgccagctccagcgccacca 2588
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>gb|DQ065837.1| Burkholderia cepacia strain 2a plasmid pIJB1, complete sequence
          Length = 99448

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   cgccagctccagcgccacca 346
             ||||||||||||||||||||
Sbjct: 24565 cgccagctccagcgccacca 24584
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>emb|AL591433.6| Mouse DNA sequence from clone RP23-268N22 on chromosome 11, complete
              sequence
          Length = 203336

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     atcaggcaggcaggcgtgac 59
              ||||||||||||||||||||
Sbjct: 201325 atcaggcaggcaggcgtgac 201306
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>dbj|AP000342.1| Plasmid R100 DNA, complete sequence
          Length = 94281

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  cgccagctccagcgccacca 346
            ||||||||||||||||||||
Sbjct: 2601 cgccagctccagcgccacca 2582


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,921,660
Number of Sequences: 3902068
Number of extensions: 2921660
Number of successful extensions: 58372
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58130
Number of HSP's gapped (non-prelim): 236
length of query: 392
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 370
effective length of database: 17,147,199,772
effective search space: 6344463915640
effective search space used: 6344463915640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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