>gb|AC096887.2| Homo sapiens chromosome 3 clone RP11-5O17, complete sequence
          Length = 171289

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 82     gaattaaacacaaaatccatgta 104
              |||||||||||||||||||||||
Sbjct: 137427 gaattaaacacaaaatccatgta 137449

>gb|AY275526.1| Pyrus communis calmodulin mRNA, partial cds
          Length = 416

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 243 acactcggaaggcttccttgag 264
           ||||||||||||||||||||||
Sbjct: 300 acactcggaaggcttccttgag 279

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 342     cctgcgccgcctcgtcctcccagtcc 367
               ||||||||||| ||||||||||||||
Sbjct: 2023311 cctgcgccgccacgtcctcccagtcc 2023286

>ref|XM_653495.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0983.2), mRNA
          Length = 951

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 265 gtcgccgtcgtcgccaacgcc 285
           |||||||||||||||||||||
Sbjct: 413 gtcgccgtcgtcgccaacgcc 433

>gb|AC122003.2| Mus musculus BAC clone RP24-336G3 from 6, complete sequence
          Length = 165969

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    cagagccatgagtcactttat 33
             |||||||||||||||||||||
Sbjct: 39703 cagagccatgagtcactttat 39723

>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16
          Length = 349640

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 272   tcgtcgccaacgccggcatcc 292
             |||||||||||||||||||||
Sbjct: 17849 tcgtcgccaacgccggcatcc 17869

>gb|AC174467.2| Medicago truncatula chromosome 7 BAC clone mth2-44j14, complete sequence
          Length = 127007

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 75     aggggttgaattaaacacaaa 95
              |||||||||||||||||||||
Sbjct: 112447 aggggttgaattaaacacaaa 112467

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 341    gcctgcgccgcctcgtcctcc 361
              |||||||||||||||||||||
Sbjct: 291262 gcctgcgccgcctcgtcctcc 291242

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 300     cctgcttgccctcgccggccc 320
               |||||||||||||||||||||
Sbjct: 2591361 cctgcttgccctcgccggccc 2591381

>ref|NM_187909.1| Oryza sativa (japonica cultivar-group), Ozsa8351 predicted mRNA
          Length = 1890

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 341 gcctgcgccgcctcgtcctc 360
           ||||||||||||||||||||
Sbjct: 585 gcctgcgccgcctcgtcctc 604

>gb|AY809708.1| Schistosoma japonicum SJCHGC08611 protein mRNA, partial cds
          Length = 655

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 23  agtcactttatttcctctgttaatcctt 50
           ||||| ||||||||||||| ||||||||
Sbjct: 206 agtcagtttatttcctctgctaatcctt 233

>gb|AC117693.9| Mus musculus chromosome 1, clone RP23-448D22, complete sequence
          Length = 193386

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    atttcctctgttaatccttt 51
             ||||||||||||||||||||
Sbjct: 59285 atttcctctgttaatccttt 59304

>gb|AC117627.16| Mus musculus chromosome 1, clone RP23-116N6, complete sequence
          Length = 201995

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     atttcctctgttaatccttt 51
              ||||||||||||||||||||
Sbjct: 178326 atttcctctgttaatccttt 178345

>emb|AL022170.1|HS501N12 Human DNA sequence from clone RP3-501N12 on chromosome 6p22.1-22.3
             Contains the 3' end of a novel gene, the 5' end of the
             gene for secretagogin (SECRET), a PX19 pseudogene and a
             CpG island, complete sequence
          Length = 170952

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    tttatttcctctgttaatcc 48
             ||||||||||||||||||||
Sbjct: 76555 tttatttcctctgttaatcc 76574

>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 331    ccgttcgttggcctgcgccg 350
              ||||||||||||||||||||
Sbjct: 227548 ccgttcgttggcctgcgccg 227567

>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    ccttgaggtcgccgtcgtcg 277
              ||||||||||||||||||||
Sbjct: 261387 ccttgaggtcgccgtcgtcg 261406

>emb|BX936305.18| Zebrafish DNA sequence from clone CH211-51N3 in linkage group 13,
             complete sequence
          Length = 150383

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   gtgcaatcaatcaatggctg 202
             ||||||||||||||||||||
Sbjct: 84936 gtgcaatcaatcaatggctg 84917

>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0711E10
          Length = 157903

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    gcctgcgccgcctcgtcctc 360
              ||||||||||||||||||||
Sbjct: 105568 gcctgcgccgcctcgtcctc 105549

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 341     gcctgcgccgcctcgtcctc 360
               ||||||||||||||||||||
Sbjct: 8530415 gcctgcgccgcctcgtcctc 8530396

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 269     ccgtcgtcgccaacgccggc 288
               ||||||||||||||||||||
Sbjct: 2269388 ccgtcgtcgccaacgccggc 2269369

>gb|AC018678.9| Homo sapiens BAC clone RP11-279E17 from 2, complete sequence
          Length = 169991

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    gaattaaacacaaaatccat 101
             ||||||||||||||||||||
Sbjct: 32861 gaattaaacacaaaatccat 32842

>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0705D01
          Length = 147174

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    gcctgcgccgcctcgtcctc 360
              ||||||||||||||||||||
Sbjct: 145370 gcctgcgccgcctcgtcctc 145351

>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 38      tctgttaatcctttttctgt 57
               ||||||||||||||||||||
Sbjct: 1478440 tctgttaatcctttttctgt 1478459

>dbj|AB158404.1| Triticum aestivum expB mRNA for putative beta-expansin, complete
           cds
          Length = 1247

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 ccttgaggtcgccgtcgtcg 277
           ||||||||||||||||||||
Sbjct: 746 ccttgaggtcgccgtcgtcg 727

>gb|AY107917.1| Zea mays PCO071987 mRNA sequence
          Length = 1735

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 335  tcgttggcctgcgccgcctcgtcc 358
            ||||||||| ||||||||||||||
Sbjct: 1358 tcgttggccagcgccgcctcgtcc 1335

>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 280     aacgccggcatccccatgaa 299
               ||||||||||||||||||||
Sbjct: 4970322 aacgccggcatccccatgaa 4970303

>gb|AY543543.1| Triticum aestivum expansin EXPB9 mRNA, complete cds
          Length = 1060

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 ccttgaggtcgccgtcgtcg 277
           ||||||||||||||||||||
Sbjct: 710 ccttgaggtcgccgtcgtcg 691


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,049,156
Number of Sequences: 3902068
Number of extensions: 3049156
Number of successful extensions: 61457
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61081
Number of HSP's gapped (non-prelim): 376
length of query: 369
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 347
effective length of database: 17,147,199,772
effective search space: 5950078320884
effective search space used: 5950078320884
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)