ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast33d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|BX322565.11| Zebrafish DNA sequence from clone CH211-262K18 ... 48 0.019
2gb|AC151760.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 46 0.074
3emb|AL117203.1|CEY48C3A Caenorhabditis elegans YAC Y48C3A, compl... 46 0.074
4gb|AC121777.3| Mus musculus BAC clone RP23-359A23 from chromosom... 44 0.29
5gb|AC159258.2| Mus musculus BAC clone RP24-87A4 from chromosome ... 44 0.29
6gb|AC145958.3| Gallus gallus BAC clone CH261-16J12 from chromoso... 44 0.29
7gb|AC004502.1| Homo sapiens chromosome 5, P1 clone 1338G6 (LBNL ... 42 1.1
8gb|AC011409.4|AC011409 Homo sapiens chromosome 5 clone CTB-77B4,... 42 1.1
9gb|AC008528.6|AC008528 Homo sapiens chromosome 5 clone CTC-473M1... 42 1.1
10ref|NM_111820.2| Arabidopsis thaliana nucleic acid binding AT3G0... 40 4.5
11ref|XM_642714.1| Dictyostelium discoideum hypothetical protein (... 40 4.5
12ref|XM_469611.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
13gb|AE014831.1| Plasmodium falciparum 3D7 chromosome 10 section 3... 40 4.5
14gb|U58755.3| Caenorhabditis elegans cosmid C34D4, complete sequence 40 4.5
15gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 40 4.5
16ref|XM_360140.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 4.5
17gb|AC117586.10| Mus musculus chromosome 3, clone RP23-166M8, com... 40 4.5
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.5
19gb|AC015985.10|ATAC015985 Arabidopsis thaliana chromosome III BA... 40 4.5
20gb|AC003091.1| Homo sapiens BAC clone CTA-326G4 from 7, complete... 40 4.5
21gb|AC146852.15| Medicago truncatula clone mth2-58k21, complete s... 40 4.5
22emb|AL591031.3| Human DNA sequence from clone RP11-151D14 on chr... 40 4.5
23emb|AL353147.10| Human DNA sequence from clone RP11-188P8 on chr... 40 4.5
24gb|AY338497.1| Homo sapiens aldehyde dehydrogenase 1 family, mem... 40 4.5
25emb|AL121575.24|HSJ914N13 Human DNA sequence from clone RP5-914N... 40 4.5
26emb|AL031116.2|HS878O8 Human DNA sequence from clone RP5-878O8 o... 40 4.5
27gb|BT000646.1| Arabidopsis thaliana unknown protein (At3g09850/... 40 4.5
28emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 4.5
29emb|CR384100.8| Zebrafish DNA sequence from clone DKEYP-22H2 in ... 40 4.5
30gb|AC157645.8| Medicago truncatula clone mth2-70l21, complete se... 40 4.5
31gb|AY057497.1| Arabidopsis thaliana AT3g09850/F8A24_10 mRNA, com... 40 4.5
32emb|BX005330.13| Zebrafish DNA sequence from clone CH211-113D13,... 40 4.5
33gb|AC157655.2| Mus musculus BAC clone RP23-462E18 from chromosom... 40 4.5
34ref|NM_068715.1| Caenorhabditis elegans Seven TM Receptor family... 40 4.5
35dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
36dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
37gb|AC008091.6|AC008091 Drosophila melanogaster, chromosome 3R, r... 40 4.5
38gb|AC073913.23| Homo sapiens 12 BAC RP11-955H22 (Roswell Park Ca... 40 4.5
39gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genom... 40 4.5
40gb|AC129181.4| Mus musculus chromosome UL clone RP23-325P17, com... 40 4.5
41dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
42gb|AC005157.1|AC005157 Homo sapiens PAC clone RP5-1108A12 from 1... 40 4.5
43dbj|AK063169.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
44dbj|AK062697.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
45emb|BX294095.13| Zebrafish DNA sequence from clone CH211-248L17 ... 40 4.5
46gb|AE003736.3| Drosophila melanogaster chromosome 3R, section 74... 40 4.5
47dbj|AP003774.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 4.5
48gb|AC104867.18| Mus musculus chromosome 18, clone RP24-320L19, c... 40 4.5
49gb|AC126801.5| Mus musculus BAC clone RP24-511J6 from 8, complet... 40 4.5
50gb|U73640.1|HSU73640 Human chromosome 11 187a8 cosmid, complete ... 40 4.5
51gb|BC039530.1| Homo sapiens, clone IMAGE:5742196, mRNA 40 4.5 
>emb|BX322565.11| Zebrafish DNA sequence from clone CH211-262K18 in linkage group 24,
             complete sequence
          Length = 158981

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 84    caaacaaaaaactacagtaataattaaa 111
             |||||||||||||||||||| |||||||
Sbjct: 62857 caaacaaaaaactacagtaaaaattaaa 62884
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>gb|AC151760.1| Ornithorhynchus anatinus chromosome UNK clone OABb-456A1, complete
              sequence
          Length = 142934

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 98     cagtaataattaaagggaaagacctga 124
              |||||||||||||||||||| ||||||
Sbjct: 128990 cagtaataattaaagggaaaaacctga 129016
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>emb|AL117203.1|CEY48C3A Caenorhabditis elegans YAC Y48C3A, complete sequence
          Length = 165027

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 72    attctgaaattccaaacaaaaaa 94
             |||||||||||||||||||||||
Sbjct: 27602 attctgaaattccaaacaaaaaa 27580
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>gb|AC121777.3| Mus musculus BAC clone RP23-359A23 from chromosome 16, complete
             sequence
          Length = 192846

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 98    cagtaataattaaagggaaaga 119
             ||||||||||||||||||||||
Sbjct: 91991 cagtaataattaaagggaaaga 91970
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>gb|AC159258.2| Mus musculus BAC clone RP24-87A4 from chromosome 13, complete sequence
          Length = 221108

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 61     ctggcttgcttattctgaaatt 82
              ||||||||||||||||||||||
Sbjct: 185788 ctggcttgcttattctgaaatt 185767
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>gb|AC145958.3| Gallus gallus BAC clone CH261-16J12 from chromosome unknown, complete
              sequence
          Length = 207441

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 32     tagggaaggaaattaaacatgc 53
              ||||||||||||||||||||||
Sbjct: 157531 tagggaaggaaattaaacatgc 157510
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>gb|AC004502.1| Homo sapiens chromosome 5, P1 clone 1338G6 (LBNL H35), complete
             sequence
          Length = 79716

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 128   attccattcatattccaagca 148
             |||||||||||||||||||||
Sbjct: 43427 attccattcatattccaagca 43447
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>gb|AC011409.4|AC011409 Homo sapiens chromosome 5 clone CTB-77B4, complete sequence
          Length = 61210

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 128  attccattcatattccaagca 148
            |||||||||||||||||||||
Sbjct: 9244 attccattcatattccaagca 9264
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>gb|AC008528.6|AC008528 Homo sapiens chromosome 5 clone CTC-473M13, complete sequence
          Length = 125764

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 128   attccattcatattccaagca 148
             |||||||||||||||||||||
Sbjct: 48252 attccattcatattccaagca 48232
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>ref|NM_111820.2| Arabidopsis thaliana nucleic acid binding AT3G09850 mRNA, complete
           cds
          Length = 2641

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 atgatgatgatgaatctgga 167
           ||||||||||||||||||||
Sbjct: 915 atgatgatgatgaatctgga 934
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>ref|XM_642714.1| Dictyostelium discoideum hypothetical protein (DDB0206267), partial
           mRNA
          Length = 3942

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 atgatgatgatgaatctgga 167
           ||||||||||||||||||||
Sbjct: 244 atgatgatgatgaatctgga 225
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>ref|XM_469611.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 891

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 292 tgttgccaccgtcgtcgtcg 311
           ||||||||||||||||||||
Sbjct: 250 tgttgccaccgtcgtcgtcg 231
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>gb|AE014831.1| Plasmodium falciparum 3D7 chromosome 10 section 3 of 7 of the complete
              sequence
          Length = 250195

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 2      aaaagaaaaagagtgtgcattattattt 29
              ||||||||||||||||| ||||||||||
Sbjct: 133279 aaaagaaaaagagtgtg-attattattt 133305
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>gb|U58755.3| Caenorhabditis elegans cosmid C34D4, complete sequence
          Length = 45313

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   ttccaaacaaaaaactacag 100
            ||||||||||||||||||||
Sbjct: 8765 ttccaaacaaaaaactacag 8784
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>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 202     cgttgatgaggctgtcaaggttgg 225
               |||||||||||| |||||||||||
Sbjct: 1083412 cgttgatgaggcggtcaaggttgg 1083435
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>ref|XM_360140.1| Magnaporthe grisea 70-15 hypothetical protein (MG05514.4) partial
           mRNA
          Length = 1467

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 294 ttgccaccgtcgtcgtcgcc 313
           ||||||||||||||||||||
Sbjct: 143 ttgccaccgtcgtcgtcgcc 162
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>gb|AC117586.10| Mus musculus chromosome 3, clone RP23-166M8, complete sequence
          Length = 215166

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 25     tattttatagggaaggaaattaaa 48
              |||||||||| |||||||||||||
Sbjct: 135168 tattttatagagaaggaaattaaa 135145
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 292      tgttgccaccgtcgtcgtcg 311
                ||||||||||||||||||||
Sbjct: 29535489 tgttgccaccgtcgtcgtcg 29535470
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>gb|AC015985.10|ATAC015985 Arabidopsis thaliana chromosome III BAC F8A24 genomic sequence,
             complete sequence
          Length = 72902

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   atgatgatgatgaatctgga 167
             ||||||||||||||||||||
Sbjct: 41785 atgatgatgatgaatctgga 41804
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>gb|AC003091.1| Homo sapiens BAC clone CTA-326G4 from 7, complete sequence
          Length = 137817

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  ccattcatattccaagcatg 150
            ||||||||||||||||||||
Sbjct: 3312 ccattcatattccaagcatg 3293
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>gb|AC146852.15| Medicago truncatula clone mth2-58k21, complete sequence
          Length = 145314

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 148    atgatgatgatgaatctggaattg 171
              |||||||||||||| |||||||||
Sbjct: 109369 atgatgatgatgaaactggaattg 109346
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>emb|AL591031.3| Human DNA sequence from clone RP11-151D14 on chromosome 9q13-21.2
             Contains a novel gene and the ALDH1A1 gene for aldehyde
             dehydrogenase 1 family member A1, complete sequence
          Length = 136895

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    aaattccaaacaaaaaacta 97
             ||||||||||||||||||||
Sbjct: 74062 aaattccaaacaaaaaacta 74081
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>emb|AL353147.10| Human DNA sequence from clone RP11-188P8 on chromosome 10 Contains the
             3' end of a novel gene, a NADH dehydrogenase 2 (MTND2)
             pseudogene, the 5' end of the gene for tumor endothelial
             marker 7-related precursor (TEM7R) (FLJ14623) and a CpG
             island, complete sequence
          Length = 98002

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    tgtgcattattattttatag 34
             ||||||||||||||||||||
Sbjct: 61553 tgtgcattattattttatag 61572
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>gb|AY338497.1| Homo sapiens aldehyde dehydrogenase 1 family, member A1 (ALDH1A1) gene,
             complete cds
          Length = 55461

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    aaattccaaacaaaaaacta 97
             ||||||||||||||||||||
Sbjct: 11984 aaattccaaacaaaaaacta 11965
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>emb|AL121575.24|HSJ914N13 Human DNA sequence from clone RP5-914N13 on chromosome 6q22.33-24.1
              Contains the ARG1 gene for liver arginase, the CRSP3 gene
              for cofactor required for Sp1 transcriptional activation
              subunit 3 (130kD), the 5' end of the ENPP3 gene for
              ectonucleotide pyrophosphatase/phosphodiesterase 3 and a
              CpG island, complete sequence
          Length = 142436

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     gaaattaaacatgcctgcat 59
              ||||||||||||||||||||
Sbjct: 130527 gaaattaaacatgcctgcat 130546
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>emb|AL031116.2|HS878O8 Human DNA sequence from clone RP5-878O8 on chromosome Xq21.1-21.33
            Contains the CPXCR1 gene for CPX chromosome region,
            candidate 1, complete sequence
          Length = 130718

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   caaacaaaaaactacagtaa 103
            ||||||||||||||||||||
Sbjct: 8727 caaacaaaaaactacagtaa 8708
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>gb|BT000646.1| Arabidopsis thaliana unknown protein  (At3g09850/F8A24_10) mRNA,
           complete cds
          Length = 2346

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 atgatgatgatgaatctgga 167
           ||||||||||||||||||||
Sbjct: 806 atgatgatgatgaatctgga 825
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>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 26      attttatagggaaggaaatt 45
               ||||||||||||||||||||
Sbjct: 3114925 attttatagggaaggaaatt 3114944
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>emb|CR384100.8| Zebrafish DNA sequence from clone DKEYP-22H2 in linkage group 13,
             complete sequence
          Length = 172918

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   atattccaagcatgatgatg 156
             ||||||||||||||||||||
Sbjct: 32322 atattccaagcatgatgatg 32341
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>gb|AC157645.8| Medicago truncatula clone mth2-70l21, complete sequence
          Length = 118562

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   atgatgatgatgaatctgga 167
             ||||||||||||||||||||
Sbjct: 35717 atgatgatgatgaatctgga 35736
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>gb|AY057497.1| Arabidopsis thaliana AT3g09850/F8A24_10 mRNA, complete cds
          Length = 2640

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 atgatgatgatgaatctgga 167
           ||||||||||||||||||||
Sbjct: 914 atgatgatgatgaatctgga 933
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>emb|BX005330.13| Zebrafish DNA sequence from clone CH211-113D13, complete sequence
          Length = 181197

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   atattccaagcatgatgatg 156
             ||||||||||||||||||||
Sbjct: 78823 atattccaagcatgatgatg 78842
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>gb|AC157655.2| Mus musculus BAC clone RP23-462E18 from chromosome 8, complete sequence
          Length = 170167

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 25    tattttatagggaaggaaattaaa 48
             ||||||||||| ||||||||||||
Sbjct: 96866 tattttataggtaaggaaattaaa 96843
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>ref|NM_068715.1| Caenorhabditis elegans Seven TM Receptor family member (str-48)
           (str-48) mRNA, complete cds
          Length = 999

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 81  ttccaaacaaaaaactacag 100
           ||||||||||||||||||||
Sbjct: 701 ttccaaacaaaaaactacag 720
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 290     cctgttgccaccgtcgtcgtcgcc 313
               |||||||||||||||||| |||||
Sbjct: 4163568 cctgttgccaccgtcgtcatcgcc 4163545
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 292      tgttgccaccgtcgtcgtcg 311
                ||||||||||||||||||||
Sbjct: 29626911 tgttgccaccgtcgtcgtcg 29626892
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>gb|AC008091.6|AC008091 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone
             BACR08K01, complete sequence
          Length = 175781

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    aaattccaaacaaaaaacta 97
             ||||||||||||||||||||
Sbjct: 93072 aaattccaaacaaaaaacta 93091
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>gb|AC073913.23| Homo sapiens 12 BAC RP11-955H22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 168165

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     agtgtgcattattattttat 32
              ||||||||||||||||||||
Sbjct: 132913 agtgtgcattattattttat 132932
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>gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genomic sequence, complete
             sequence
          Length = 132782

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   tgttgccaccgtcgtcgtcg 311
             ||||||||||||||||||||
Sbjct: 58119 tgttgccaccgtcgtcgtcg 58100
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>gb|AC129181.4| Mus musculus chromosome UL clone RP23-325P17, complete sequence
          Length = 204520

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     tattttatagggaaggaaat 44
              ||||||||||||||||||||
Sbjct: 135056 tattttatagggaaggaaat 135075
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>dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0066C12
          Length = 168874

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 290    cctgttgccaccgtcgtcgtcgcc 313
              |||||||||||||||||| |||||
Sbjct: 147049 cctgttgccaccgtcgtcatcgcc 147026
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>gb|AC005157.1|AC005157 Homo sapiens PAC clone RP5-1108A12 from 14q24.3, complete sequence
          Length = 164275

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     ttttatagggaaggaaatta 46
              ||||||||||||||||||||
Sbjct: 121069 ttttatagggaaggaaatta 121088
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>dbj|AK063169.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-B11, full
           insert sequence
          Length = 1003

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 292 tgttgccaccgtcgtcgtcg 311
           ||||||||||||||||||||
Sbjct: 308 tgttgccaccgtcgtcgtcg 289
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>dbj|AK062697.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-A10, full
           insert sequence
          Length = 513

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 292 tgttgccaccgtcgtcgtcg 311
           ||||||||||||||||||||
Sbjct: 301 tgttgccaccgtcgtcgtcg 282
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>emb|BX294095.13| Zebrafish DNA sequence from clone CH211-248L17 in linkage group 24,
             complete sequence
          Length = 147604

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 84    caaacaaaaaactacagtaataattaaa 111
             ||||||||||||||||| || |||||||
Sbjct: 41965 caaacaaaaaactacaggaaaaattaaa 41992
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>gb|AE003736.3| Drosophila melanogaster chromosome 3R, section 74 of 118 of the complete
              sequence
          Length = 235928

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     aaattccaaacaaaaaacta 97
              ||||||||||||||||||||
Sbjct: 233380 aaattccaaacaaaaaacta 233399
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>dbj|AP003774.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-147G6, complete
              sequence
          Length = 166128

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     aaacaaaaaactacagtaat 104
              ||||||||||||||||||||
Sbjct: 162401 aaacaaaaaactacagtaat 162382
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>gb|AC104867.18| Mus musculus chromosome 18, clone RP24-320L19, complete sequence
          Length = 148876

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 24    ttattttatagggaaggaaattaa 47
             |||||||||||| |||||||||||
Sbjct: 75986 ttattttataggaaaggaaattaa 76009
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>gb|AC126801.5| Mus musculus BAC clone RP24-511J6 from 8, complete sequence
          Length = 157089

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 25    tattttatagggaaggaaattaaa 48
             ||||||||||| ||||||||||||
Sbjct: 43377 tattttataggtaaggaaattaaa 43354
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>gb|U73640.1|HSU73640 Human chromosome 11 187a8 cosmid, complete sequence
          Length = 36092

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    aaacaaaaaactacagtaat 104
             ||||||||||||||||||||
Sbjct: 19405 aaacaaaaaactacagtaat 19386
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>gb|BC039530.1| Homo sapiens, clone IMAGE:5742196, mRNA
          Length = 874

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 13  agtgtgcattattattttat 32
           ||||||||||||||||||||
Sbjct: 849 agtgtgcattattattttat 830


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,073,062
Number of Sequences: 3902068
Number of extensions: 6073062
Number of successful extensions: 121617
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 121305
Number of HSP's gapped (non-prelim): 313
length of query: 343
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 321
effective length of database: 17,147,199,772
effective search space: 5504251126812
effective search space used: 5504251126812
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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