| Clone Name | rbast33d10 |
|---|---|
| Clone Library Name | barley_pub |
>GAIPB_CUCMA (Q6EI05) DELLA protein GAIP-B (Gibberellic acid-insensitive phloem| protein B) (GAIP-B) (CmGAIP-B) Length = 587 Score = 29.6 bits (65), Expect = 2.1 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -3 Query: 279 GLVVKPENGVLRLGWKGRVVTVASAWR 199 G V+ NG L LGW R + V SAW+ Sbjct: 551 GYRVEENNGSLTLGWHTRPLIVTSAWK 577
>GAI1_VITVI (Q8S4W7) DELLA protein GAI1 (Gibberellic acid-insensitive mutant| protein 1) (VvGAI1) Length = 590 Score = 28.9 bits (63), Expect = 3.5 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -3 Query: 279 GLVVKPENGVLRLGWKGRVVTVASAWR*FGEVGPSLPA 166 G V+ NG L LGW R + SAW+ + P+LP+ Sbjct: 549 GYRVEENNGCLMLGWHTRPLIATSAWQLANK--PALPS 584
>CIGR2_ORYSA (Q8GVE1) Chitin-inducible gibberellin-responsive protein 2| Length = 544 Score = 28.9 bits (63), Expect = 3.5 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -3 Query: 258 NGVLRLGWKGRVVTVASAW 202 +G L LGWK R + V+SAW Sbjct: 525 DGALYLGWKSRPLVVSSAW 543
>RS3_AMBME (P79891) 40S ribosomal protein S3| Length = 253 Score = 28.5 bits (62), Expect = 4.6 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -3 Query: 252 VLRLGWKGRVVTVASAWR*FGEVGPSLPAPDNCLI 148 +LR G G V + AW G++GP P PD+ I Sbjct: 176 LLRQGVLGIKVKIMLAWDPSGKIGPKKPLPDHVSI 210
>RGA2_BRACM (Q5BN22) DELLA protein RGA2 (RGA-like protein 2) (BrRGA2)| Length = 579 Score = 28.5 bits (62), Expect = 4.6 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 Query: 279 GLVVKPENGVLRLGWKGRVVTVASAWR 199 G V+ NG L LGW R + SAW+ Sbjct: 548 GYRVEENNGCLMLGWHTRPLITTSAWK 574
>RGA_ARATH (Q9SLH3) DELLA protein RGA (Repressor on the ga1-3 mutant)| (GAI-related sequence) (Restoration of growth on ammonia protein 1) Length = 587 Score = 28.5 bits (62), Expect = 4.6 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 Query: 279 GLVVKPENGVLRLGWKGRVVTVASAWR 199 G V+ NG L LGW R + SAW+ Sbjct: 555 GYRVEESNGCLMLGWHTRPLITTSAWK 581
>DWRF8_MAIZE (Q9ST48) DELLA protein DWARF8 (Protein dwarf-8)| Length = 630 Score = 28.1 bits (61), Expect = 6.0 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -3 Query: 279 GLVVKPENGVLRLGWKGRVVTVASAWR 199 G V+ ++G L LGW R + SAWR Sbjct: 597 GYRVEEKDGCLTLGWHTRPLIATSAWR 623
>RHT1_WHEAT (Q9ST59) DELLA protein RHT-1 (Reduced height protein 1) (Protein| Rht-B1/Rht-D1) Length = 623 Score = 28.1 bits (61), Expect = 6.0 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 Query: 279 GLVVKPENGVLRLGWKGRVVTVASAWR 199 G V+ + G L LGW R + SAWR Sbjct: 593 GYKVEEKEGCLTLGWHTRPLIATSAWR 619
>SLN1_HORVU (Q8W127) DELLA protein SLN1 (Slender protein 1)| Length = 618 Score = 28.1 bits (61), Expect = 6.0 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 Query: 279 GLVVKPENGVLRLGWKGRVVTVASAWR 199 G V+ + G L LGW R + SAWR Sbjct: 588 GYKVEEKEGCLTLGWHTRPLIATSAWR 614
>RGL1_ARATH (Q9C8Y3) DELLA protein RGL1 (RGA-like protein 1) (RGA-like protein)| Length = 511 Score = 27.7 bits (60), Expect = 7.8 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 Query: 279 GLVVKPENGVLRLGWKGRVVTVASAWR 199 G V+ G L LGW+ R + SAWR Sbjct: 480 GYNVEENEGCLLLGWQTRPLIATSAWR 506
>SLR1_ORYSA (Q7G7J6) DELLA protein SLR1 (Protein SLENDER RICE1) (Gibberellic| acid-insensitive mutant protein) (OsGAI) Length = 625 Score = 27.7 bits (60), Expect = 7.8 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 Query: 279 GLVVKPENGVLRLGWKGRVVTVASAWR 199 G V+ + G L LGW R + SAWR Sbjct: 595 GYRVEEKEGCLTLGWHTRPLIATSAWR 621
>ARGI_ASHGO (Q74ZW4) Arginase (EC 3.5.3.1)| Length = 399 Score = 27.7 bits (60), Expect = 7.8 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = -2 Query: 289 SPARACRQAREWRAPARMEGAGGDRRLRLALIW*GRAIIAGPRQ 158 S A + + R WRA R GAGG ++ GR AG RQ Sbjct: 40 SSAASDAKCRRWRAAGRGGGAGG--------VYNGRGAAAGSRQ 75 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,996,134 Number of Sequences: 219361 Number of extensions: 757896 Number of successful extensions: 1600 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1542 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1599 length of database: 80,573,946 effective HSP length: 72 effective length of database: 64,779,954 effective search space used: 1554718896 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)