ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast33d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473634.1| Oryza sativa (japonica cultivar-group), predic... 96 7e-17
2emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4,... 96 7e-17
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 96 7e-17
4dbj|AK100294.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 7e-17
5gb|BT018672.1| Zea mays clone EL01N0510E05.d mRNA sequence 68 2e-08
6gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 44 0.24
7gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 44 0.24
8gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 44 0.24
9gb|CP000001.1| Bacillus cereus E33L, complete genome 44 0.24
10gb|AC092489.4| Oryza sativa chromosome 10 BAC OSJNBa0066I08 geno... 44 0.24
11gb|AC128649.5| Homo sapiens 12 BAC RP11-728G4 (Roswell Park Canc... 44 0.24
12gb|AC009899.12| Homo sapiens chromosome 18, clone RP11-19F9, com... 44 0.24
13gb|AC128657.2| Homo sapiens 12 BAC RP11-1079J22 (Roswell Park Ca... 44 0.24
14gb|AC103769.2| Homo sapiens chromosome 8, clone RP11-110G21, com... 44 0.24
15gb|AC064807.7| Homo sapiens chromosome 8, clone RP11-546K22, com... 44 0.24
16gb|AC067932.9| Homo sapiens chromosome 8, clone RP11-78F5, compl... 44 0.24
17dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.24
18gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 44 0.24
19gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.24
20gb|AC148517.3| Felis catus clone RP86-202K10, complete sequence 42 0.96
21gb|AC121481.6| Rattus norvegicus NOVECTOR CH230-218J9 (Children... 42 0.96
22gb|AY147228.1| Campylocentrum micranthum isolate 3 tRNA-Leu (trn... 42 0.96
23gb|AY147227.1| Campylocentrum micranthum isolate 2 tRNA-Leu (trn... 42 0.96
24emb|AL157781.8| Human DNA sequence from clone RP11-115N6 on chro... 42 0.96
25gb|AC109361.4| Homo sapiens BAC clone RP11-710F7 from 4, complet... 42 0.96
26ref|XM_550002.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.8
27gb|AC092728.2| Canis familiaris clone RP81-237O17, complete sequ... 40 3.8
28emb|AL357352.11| Human DNA sequence from clone RP11-799G19 on ch... 40 3.8
29emb|CR932039.2| Medicago truncatula chromosome 5 clone mth2-6h11... 40 3.8
30emb|BX324006.19| Zebrafish DNA sequence from clone DKEY-46M10 in... 40 3.8
31gb|AC021630.11| Mus musculus chromosome 14, clone RP23-178B24, c... 40 3.8
32gb|AC103710.2| Homo sapiens chromosome 11, clone CTD-2379P15, co... 40 3.8
33gb|AC090719.8| Homo sapiens chromosome 11, clone RP11-648B16, co... 40 3.8
34dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
35dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
36gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 3.8
37dbj|AP005828.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
38dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
39emb|BX936328.7| Zebrafish DNA sequence from clone CH211-11F20 in... 40 3.8
40emb|BX005062.4| Zebrafish DNA sequence from clone CH211-95I5 in ... 40 3.8
41gb|AE015927.1| Clostridium tetani E88, complete genome 40 3.8
42gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome 40 3.8 
>ref|XM_473634.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1860

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 66/72 (91%)
 Strand = Plus / Minus

                                                                        
Query: 200  cgccaggcggaggcgacggtcaccacccgccccttccatccgagccggagcacgccattc 259
            |||||||||||||||||||| ||||| |||||| |||||||||||||||||||||| |||
Sbjct: 1856 cgccaggcggaggcgacggtgaccacgcgccccatccatccgagccggagcacgccgttc 1797

                        
Query: 260  tcgggcttgacg 271
            || | |||||||
Sbjct: 1796 tccgccttgacg 1785
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>emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23,
             complete sequence
          Length = 149892

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                         
Query: 200   cgccaggcggaggcgacggtcaccacccgccccttccatccgagccggagcacgccattc 259
             |||||||||||||||||||| ||||| |||||| |||||||||||||||||||||| |||
Sbjct: 51464 cgccaggcggaggcgacggtgaccacgcgccccatccatccgagccggagcacgccgttc 51523

                         
Query: 260   tcgggcttgacg 271
             || | |||||||
Sbjct: 51524 tccgccttgacg 51535
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                            
Query: 200      cgccaggcggaggcgacggtcaccacccgccccttccatccgagccggagcacgccattc 259
                |||||||||||||||||||| ||||| |||||| |||||||||||||||||||||| |||
Sbjct: 29248418 cgccaggcggaggcgacggtgaccacgcgccccatccatccgagccggagcacgccgttc 29248477

                            
Query: 260      tcgggcttgacg 271
                || | |||||||
Sbjct: 29248478 tccgccttgacg 29248489
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>dbj|AK100294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075P18, full
            insert sequence
          Length = 2231

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 66/72 (91%)
 Strand = Plus / Minus

                                                                        
Query: 200  cgccaggcggaggcgacggtcaccacccgccccttccatccgagccggagcacgccattc 259
            |||||||||||||||||||| ||||| |||||| |||||||||||||||||||||| |||
Sbjct: 2037 cgccaggcggaggcgacggtgaccacgcgccccatccatccgagccggagcacgccgttc 1978

                        
Query: 260  tcgggcttgacg 271
            || | |||||||
Sbjct: 1977 tccgccttgacg 1966
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>gb|BT018672.1| Zea mays clone EL01N0510E05.d mRNA sequence
          Length = 1422

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 197  tagcgccaggcggaggcgacggtcaccacccgccccttccatccgagccggagcacgcca 256
            |||||||| |||||||||||||||||| | |||||| |||| | || |||||||||||| 
Sbjct: 1145 tagcgccacgcggaggcgacggtcaccgcgcgccccatccaacagaaccggagcacgccg 1086

                          
Query: 257  ttctcgggcttgac 270
            ||||| | ||||||
Sbjct: 1085 ttctccgccttgac 1072



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 39   attatgagtcgctacagcta 58
            ||||||||||||||||||||
Sbjct: 1330 attatgagtcgctacagcta 1311
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1      gcgtaataatgtactctttcca 22
              ||||||||||||||||||||||
Sbjct: 335182 gcgtaataatgtactctttcca 335161
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1      gcgtaataatgtactctttcca 22
              ||||||||||||||||||||||
Sbjct: 320981 gcgtaataatgtactctttcca 320960
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1      gcgtaataatgtactctttcca 22
              ||||||||||||||||||||||
Sbjct: 320994 gcgtaataatgtactctttcca 320973
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1      gcgtaataatgtactctttcca 22
              ||||||||||||||||||||||
Sbjct: 334744 gcgtaataatgtactctttcca 334723
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>gb|AC092489.4| Oryza sativa chromosome 10 BAC OSJNBa0066I08 genomic sequence, complete
             sequence
          Length = 25375

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 4     taataatgtactctttccatat 25
             ||||||||||||||||||||||
Sbjct: 14907 taataatgtactctttccatat 14928
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>gb|AC128649.5| Homo sapiens 12 BAC RP11-728G4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167071

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 107   acaaattaaaaaaggataaaaa 128
             ||||||||||||||||||||||
Sbjct: 80848 acaaattaaaaaaggataaaaa 80827
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>gb|AC009899.12| Homo sapiens chromosome 18, clone RP11-19F9, complete sequence
          Length = 164359

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 88    atcacaccttgccaatccaaca 109
             ||||||||||||||||||||||
Sbjct: 84311 atcacaccttgccaatccaaca 84332
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>gb|AC128657.2| Homo sapiens 12 BAC RP11-1079J22 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 60001

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 107   acaaattaaaaaaggataaaaa 128
             ||||||||||||||||||||||
Sbjct: 28516 acaaattaaaaaaggataaaaa 28537
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>gb|AC103769.2| Homo sapiens chromosome 8, clone RP11-110G21, complete sequence
          Length = 138097

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 8     aatgtactctttccatatatta 29
             ||||||||||||||||||||||
Sbjct: 92681 aatgtactctttccatatatta 92702
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>gb|AC064807.7| Homo sapiens chromosome 8, clone RP11-546K22, complete sequence
          Length = 203270

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 8      aatgtactctttccatatatta 29
              ||||||||||||||||||||||
Sbjct: 187902 aatgtactctttccatatatta 187881
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>gb|AC067932.9| Homo sapiens chromosome 8, clone RP11-78F5, complete sequence
          Length = 163777

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 8     aatgtactctttccatatatta 29
             ||||||||||||||||||||||
Sbjct: 15227 aatgtactctttccatatatta 15248
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 4        taataatgtactctttccatat 25
                ||||||||||||||||||||||
Sbjct: 18364316 taataatgtactctttccatat 18364337
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1      gcgtaataatgtactctttcca 22
              ||||||||||||||||||||||
Sbjct: 320981 gcgtaataatgtactctttcca 320960
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 4        taataatgtactctttccatat 25
                ||||||||||||||||||||||
Sbjct: 18374369 taataatgtactctttccatat 18374390
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>gb|AC148517.3| Felis catus clone RP86-202K10, complete sequence
          Length = 75775

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 110   aattaaaaaaggataaaaata 130
             |||||||||||||||||||||
Sbjct: 39696 aattaaaaaaggataaaaata 39716
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>gb|AC121481.6| Rattus norvegicus  NOVECTOR CH230-218J9 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 236244

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     ctttactactagatcaagaac 81
              |||||||||||||||||||||
Sbjct: 165790 ctttactactagatcaagaac 165770
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>gb|AY147228.1| Campylocentrum micranthum isolate 3 tRNA-Leu (trnL) gene and
           trnL-trnF intergenic spacer, partial sequence;
           chloroplast gene for chloroplast product
          Length = 1261

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 110 aattaaaaaaggataaaaatagagg 134
           ||||||||||| |||||||||||||
Sbjct: 625 aattaaaaaagaataaaaatagagg 601
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>gb|AY147227.1| Campylocentrum micranthum isolate 2 tRNA-Leu (trnL) gene and
           trnL-trnF intergenic spacer, partial sequence;
           chloroplast gene for chloroplast product
          Length = 1281

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 110 aattaaaaaaggataaaaatagagg 134
           ||||||||||| |||||||||||||
Sbjct: 638 aattaaaaaagaataaaaatagagg 614
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>emb|AL157781.8| Human DNA sequence from clone RP11-115N6 on chromosome 10, complete
              sequence
          Length = 119502

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 112    ttaaaaaaggataaaaataga 132
              |||||||||||||||||||||
Sbjct: 105098 ttaaaaaaggataaaaataga 105118
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>gb|AC109361.4| Homo sapiens BAC clone RP11-710F7 from 4, complete sequence
          Length = 133749

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 105   caacaaattaaaaaaggataa 125
             |||||||||||||||||||||
Sbjct: 42427 caacaaattaaaaaaggataa 42407
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>ref|XM_550002.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 687

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 202 ccaggcggaggcgacggtca 221
           ||||||||||||||||||||
Sbjct: 513 ccaggcggaggcgacggtca 494
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>gb|AC092728.2| Canis familiaris clone RP81-237O17, complete sequence
          Length = 141578

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 218   gtcaccacccgccccttccatccg 241
             |||||||||| |||||||||||||
Sbjct: 18651 gtcaccaccctccccttccatccg 18628
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>emb|AL357352.11| Human DNA sequence from clone RP11-799G19 on chromosome 6 Contains part
             of the TRDN gene for triadin (TDN, TRIADIN), complete
             sequence
          Length = 106601

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   aaattaaaaaaggataaaaataga 132
             ||||||||||||| ||||||||||
Sbjct: 95755 aaattaaaaaaggttaaaaataga 95732
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>emb|CR932039.2| Medicago truncatula chromosome 5 clone mth2-6h11, COMPLETE SEQUENCE
          Length = 132508

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    aaattaaaaaaggataaaaa 128
              ||||||||||||||||||||
Sbjct: 118576 aaattaaaaaaggataaaaa 118557
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>emb|BX324006.19| Zebrafish DNA sequence from clone DKEY-46M10 in linkage group 16,
              complete sequence
          Length = 135340

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 107    acaaattaaaaaaggataaaaata 130
              |||||| |||||||||||||||||
Sbjct: 101286 acaaatgaaaaaaggataaaaata 101309
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>gb|AC021630.11| Mus musculus chromosome 14, clone RP23-178B24, complete sequence
          Length = 202804

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 62    tttactactagatcaagaacaaac 85
             ||||||||||||||||||| ||||
Sbjct: 30195 tttactactagatcaagaagaaac 30172
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>gb|AC103710.2| Homo sapiens chromosome 11, clone CTD-2379P15, complete sequence
          Length = 151970

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    aaattaaaaaaggataaaaa 128
              ||||||||||||||||||||
Sbjct: 146157 aaattaaaaaaggataaaaa 146138
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>gb|AC090719.8| Homo sapiens chromosome 11, clone RP11-648B16, complete sequence
          Length = 179177

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 109  aaattaaaaaaggataaaaa 128
            ||||||||||||||||||||
Sbjct: 6395 aaattaaaaaaggataaaaa 6376
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 109     aaattaaaaaaggataaaaataga 132
               ||||||||||||| ||||||||||
Sbjct: 3014162 aaattaaaaaaggttaaaaataga 3014139
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 202     ccaggcggaggcgacggtca 221
               ||||||||||||||||||||
Sbjct: 1569029 ccaggcggaggcgacggtca 1569048
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 213     cgacggtcaccacccgcccc 232
               ||||||||||||||||||||
Sbjct: 2598250 cgacggtcaccacccgcccc 2598269
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>dbj|AP005828.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0702F05
          Length = 145018

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 109    aaattaaaaaaggataaaaataga 132
              ||||||||||||| ||||||||||
Sbjct: 102111 aaattaaaaaaggttaaaaataga 102088
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>dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0408F06
          Length = 137462

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 202  ccaggcggaggcgacggtca 221
            ||||||||||||||||||||
Sbjct: 6260 ccaggcggaggcgacggtca 6279
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>emb|BX936328.7| Zebrafish DNA sequence from clone CH211-11F20 in linkage group 18,
             complete sequence
          Length = 113038

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   ccatccgagccggagcacgc 254
             ||||||||||||||||||||
Sbjct: 69176 ccatccgagccggagcacgc 69195
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>emb|BX005062.4| Zebrafish DNA sequence from clone CH211-95I5 in linkage group 19,
             complete sequence
          Length = 170213

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   aaattaaaaaaggataaaaa 128
             ||||||||||||||||||||
Sbjct: 75425 aaattaaaaaaggataaaaa 75444
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>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 3       gtaataatgtactctttcca 22
               ||||||||||||||||||||
Sbjct: 1532015 gtaataatgtactctttcca 1532034
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>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome
          Length = 1698955

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    aaattaaaaaaggataaaaa 128
              ||||||||||||||||||||
Sbjct: 445772 aaattaaaaaaggataaaaa 445753


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,726,979
Number of Sequences: 3902068
Number of extensions: 2726979
Number of successful extensions: 55066
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54712
Number of HSP's gapped (non-prelim): 354
length of query: 290
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 268
effective length of database: 17,147,199,772
effective search space: 4595449538896
effective search space used: 4595449538896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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