>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)|
          Length = 291

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = -3

Query: 276 VDLDGRQIRVTVAESKPREQ 217
           VDLDGR IRV+ AE +PR Q
Sbjct: 271 VDLDGRSIRVSAAEERPRRQ 290

>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)|
          Length = 292

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -3

Query: 276 VDLDGRQIRVTVAESKPREQ 217
           +DLDGR IRV+ AE +PR Q
Sbjct: 272 IDLDGRSIRVSAAEERPRRQ 291

>Y190_CHLPN (Q9Z8Z4) Hypothetical protein CPn_0190/CP0577/CPj0190/CpB0193|
          Length = 452

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -1

Query: 269 LTAGRSGLPWQSRSRGSKGGFKIS*LWLEINHVLRKC*FVVSTTI 135
           LT+G SG  W+S S+ + G F  S L  +       C  + STT+
Sbjct: 284 LTSGISGFTWKSASKSNDGSFPFSALRHKETESDTDCFQITSTTL 328

>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast|
           precursor
          Length = 289

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = -3

Query: 273 DLDGRQIRVTVAESKP 226
           DLDGRQIRV+ AE++P
Sbjct: 269 DLDGRQIRVSEAEARP 284

>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein cp29)
          Length = 342

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = -3

Query: 273 DLDGRQIRVTVAESKP 226
           DLDGRQIRV+ AE++P
Sbjct: 322 DLDGRQIRVSEAEARP 337

>YG1T_YEAST (P53227) Hypothetical 31.0 kDa protein in BUD9-RME1 intergenic|
           region
          Length = 271

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -1

Query: 239 QSRSRGSKGGFKIS*LWLEINHVLRKC*FVVSTTIFSRLMR 117
           Q+    +KGGF IS L L++N   +K   ++ST + +   R
Sbjct: 146 QTEDNATKGGFNISKLTLKVNKPFKKPKRILSTNVVNESNR 186

>PGK_CAEEL (P91427) Probable phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 417

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 61  NELHG*QKSSGIQIHFPVSLINREKIVVETTN 156
           NEL    K+ G+QIH PV  +  +K   + T+
Sbjct: 266 NELLEAAKAKGVQIHLPVDFVIADKFAEDATS 297


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,897,302
Number of Sequences: 219361
Number of extensions: 548147
Number of successful extensions: 1218
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 80,573,946
effective HSP length: 68
effective length of database: 65,657,398
effective search space used: 1575777552
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)