ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast28g12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRN... 523 e-146
2gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 513 e-143
3gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full... 147 2e-32
4ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 121 1e-24
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 121 1e-24
6emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 121 1e-24
7gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 121 1e-24
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 121 1e-24
9dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 1e-24
10gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full ... 119 5e-24
11gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-... 115 8e-23
12gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequ... 111 1e-21
13gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence 109 5e-21
14gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 ge... 109 5e-21
15gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 ge... 109 5e-21
16gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 ge... 109 5e-21
17gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 ge... 109 5e-21
18gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 ge... 109 5e-21
19gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 ge... 109 5e-21
20gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 ge... 109 5e-21
21gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 ge... 109 5e-21
22gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 ge... 109 5e-21
23gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 ge... 109 5e-21
24gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 ge... 109 5e-21
25gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 ge... 109 5e-21
26gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 ge... 109 5e-21
27gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 geno... 109 5e-21
28gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 107 2e-20
29gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 107 2e-20
30gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 105 8e-20
31ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 90 4e-15
32gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 90 4e-15
33gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 90 4e-15
34gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 88 2e-14
35gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, co... 66 6e-08
36ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA 58 2e-05
37ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA 58 2e-05
38gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual posit... 58 2e-05
39dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
40dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
41dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
42dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
43gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partia... 58 2e-05
44dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
45gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
46emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa... 52 0.001
47gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible l... 52 0.001
48emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2... 50 0.004
49gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 geno... 48 0.015
50gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.015
51gb|AY103567.1| Zea mays PCO116252 mRNA sequence 44 0.24
52dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.94
53dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.94
54dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.94
55gb|AY111869.1| Zea mays CL452_-8 mRNA sequence 42 0.94
56ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.7
57emb|AL078613.10|HSA354I12 Human DNA sequence from clone RP11-354... 40 3.7
58emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chro... 40 3.7
59dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
60dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
61dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.7
62gb|U76687.2|PVU76687 Phaseolus vulgaris lipoxygenase mRNA, compl... 40 3.7
63dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.7
64gb|AY110522.1| Zea mays CL4677_2 mRNA sequence 40 3.7
65gb|AY104322.1| Zea mays PCO093659 mRNA sequence 40 3.7
66emb|AL954813.14| Mouse DNA sequence from clone RP24-541E15 on ch... 40 3.7

>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds
          Length = 1331

 Score =  523 bits (264), Expect = e-146
 Identities = 279/284 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    ccaggggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtact 60
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 ccagtggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtact 1174

                                                                        
Query: 61   gtcacagacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgcccttta 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 gtcacagacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgcccttta 1114

                                                                        
Query: 121  ttcatccatggttgccgatggcttaaattaaatggagatgctgttggggatgcccttggc 180
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1113 ttcatccatggttgccgatggcttaaattagatggagatgctgttggggatgcccttggc 1054

                                                                        
Query: 181  ggaaagcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtaggg 240
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 ggtaagcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtaggg 994

                                                        
Query: 241  aaacttacccggcccgttgcggttcttgagctccgggtcatggt 284
            ||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 993  aaacttagccgggccgttgcggttcttgagctccgggtcatggt 950



to top

>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score =  513 bits (259), Expect = e-143
 Identities = 274/279 (98%)
 Strand = Plus / Minus

                                                                        
Query: 6    ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 65
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2799 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 2740

                                                                        
Query: 66   agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 125
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2739 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 2680

                                                                        
Query: 126  ccatggttgccgatggcttaaattaaatggagatgctgttggggatgcccttggcggaaa 185
            |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||
Sbjct: 2679 ccatggttgccgatggcttagattagatggagatgctgttggggatgcccttggcggtaa 2620

                                                                        
Query: 186  gcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtagggaaact 245
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2619 gcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtagggaaact 2560

                                                   
Query: 246  tacccggcccgttgcggttcttgagctccgggtcatggt 284
            || |||| |||||||||||||||||||||||||||||||
Sbjct: 2559 tagccgggccgttgcggttcttgagctccgggtcatggt 2521



to top

>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA
           sequence
          Length = 1020

 Score =  147 bits (74), Expect = 2e-32
 Identities = 104/114 (91%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||||||||||||||| ||||  |||||||| |||||||||||||| |||
Sbjct: 749 atggagatgctgttggggatgcccttagcggtgagcccggcggcggcgcccttgtgatcg 690

                                                                 
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttc 265
           ||||||||||||||||||| ||||||||| |||||  |||| ||||||||||||
Sbjct: 689 gaggtgttggggtagagcaacatgtaggggaacttggccggaccgttgcggttc 636



to top

>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score =  121 bits (61), Expect = 1e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                        
Query: 152  atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
            |||||||||||||||||||||||| ||||||| || ||||||||| |||||||| |||||
Sbjct: 2609 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2550

                                         
Query: 212  gaggtgttggggtagagcagcatgtaggg 240
            |||||||| |||||||||||| |||||||
Sbjct: 2549 gaggtgtttgggtagagcagcgtgtaggg 2521



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  121 bits (61), Expect = 1e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                            
Query: 152      atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
                |||||||||||||||||||||||| ||||||| || ||||||||| |||||||| |||||
Sbjct: 30026445 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 30026386

                                             
Query: 212      gaggtgttggggtagagcagcatgtaggg 240
                |||||||| |||||||||||| |||||||
Sbjct: 30026385 gaggtgtttgggtagagcagcgtgtaggg 30026357



 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                            
Query: 155      gagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcggag 214
                ||||||||||||||||||||||||||||  |  ||||| ||||||||  ||  |||||||
Sbjct: 27803100 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggag 27803041

                                                                         
Query: 215      gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagc 271
                ||||||||||| ||||||||||| || ||||   | || || |||||||||||||||
Sbjct: 27803040 gtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagc 27802984



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                         
Query: 215      gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagc 271
                ||||||||||| ||||||||||| || | |||  |||||||||| ||||||||||||
Sbjct: 27821616 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 27821560



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 152      atggagatgctgttggggatgcccttggcgg 182
                |||||||||||||||||||||||| ||||||
Sbjct: 27821682 atggagatgctgttggggatgcccatggcgg 27821652



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 150      aaatggagatgctgttggggatgccctt 177
                |||||| |||||||||||||||||||||
Sbjct: 14300020 aaatggtgatgctgttggggatgccctt 14300047



to top

>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score =  121 bits (61), Expect = 1e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                        
Query: 152  atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
            |||||||||||||||||||||||| ||||||| || ||||||||| |||||||| |||||
Sbjct: 2691 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2632

                                         
Query: 212  gaggtgttggggtagagcagcatgtaggg 240
            |||||||| |||||||||||| |||||||
Sbjct: 2631 gaggtgtttgggtagagcagcgtgtaggg 2603



to top

>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score =  121 bits (61), Expect = 1e-24
 Identities = 82/89 (92%)
 Strand = Plus / Plus

                                                                         
Query: 152   atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
             |||||||||||||||||||||||| ||||||| || ||||||||| |||||||| |||||
Sbjct: 81306 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 81365

                                          
Query: 212   gaggtgttggggtagagcagcatgtaggg 240
             |||||||| |||||||||||| |||||||
Sbjct: 81366 gaggtgtttgggtagagcagcgtgtaggg 81394



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  121 bits (61), Expect = 1e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                            
Query: 152      atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
                |||||||||||||||||||||||| ||||||| || ||||||||| |||||||| |||||
Sbjct: 30117867 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 30117808

                                             
Query: 212      gaggtgttggggtagagcagcatgtaggg 240
                |||||||| |||||||||||| |||||||
Sbjct: 30117807 gaggtgtttgggtagagcagcgtgtaggg 30117779



 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                            
Query: 155      gagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcggag 214
                ||||||||||||||||||||||||||||  |  ||||| ||||||||  ||  |||||||
Sbjct: 27894424 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggag 27894365

                                                                         
Query: 215      gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagc 271
                ||||||||||| ||||||||||| || ||||   | || || |||||||||||||||
Sbjct: 27894364 gtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagc 27894308



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                         
Query: 215      gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagc 271
                ||||||||||| ||||||||||| || | |||  |||||||||| ||||||||||||
Sbjct: 27912940 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 27912884



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 152      atggagatgctgttggggatgcccttggcgg 182
                |||||||||||||||||||||||| ||||||
Sbjct: 27913006 atggagatgctgttggggatgcccatggcgg 27912976



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 150      aaatggagatgctgttggggatgccctt 177
                |||||| |||||||||||||||||||||
Sbjct: 14294995 aaatggtgatgctgttggggatgccctt 14295022



to top

>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
            insert sequence
          Length = 2928

 Score =  121 bits (61), Expect = 1e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                        
Query: 152  atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
            |||||||||||||||||||||||| ||||||| || ||||||||| |||||||| |||||
Sbjct: 2724 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2665

                                         
Query: 212  gaggtgttggggtagagcagcatgtaggg 240
            |||||||| |||||||||||| |||||||
Sbjct: 2664 gaggtgtttgggtagagcagcgtgtaggg 2636



to top

>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA
           sequence
          Length = 1129

 Score =  119 bits (60), Expect = 5e-24
 Identities = 105/120 (87%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||||||||||||| |||| |  |||||  | ||   |||| ||||||||
Sbjct: 902 atggagatgctgttggggatgcccctggccgtgagcccctcggcctggcccgtgtggtcg 843

                                                                       
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagc 271
           ||||||||||||||||||||||||||||| |||||  |||||||| ||||||||||||||
Sbjct: 842 gaggtgttggggtagagcagcatgtaggggaacttggccggcccggtgcggttcttgagc 783



to top

>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds
          Length = 2267

 Score =  115 bits (58), Expect = 8e-23
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                        
Query: 152  atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
            ||||||||||||||||||||||||||||| |  ||||| || ||||||||  ||||||| 
Sbjct: 2060 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtca 2001

                                              
Query: 212  gaggtgttggggtagagcagcatgtagggaaact 245
            ||||||||||||||||||||||||||||| ||||
Sbjct: 2000 gaggtgttggggtagagcagcatgtaggggaact 1967



to top

>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence
          Length = 934

 Score =  111 bits (56), Expect = 1e-21
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                       
Query: 158 atgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcggaggtg 217
           |||||||||||||||||||||||||  || ||||| ||||| |||||||||||  |||||
Sbjct: 1   atgctgttggggatgcccttggcggtgaggccggcggcggcacccttgtggtcttaggtg 60

                                                           
Query: 218 ttggggtagagcagcatgtagggaaacttacccggcccgttgcggttc 265
           || |||||||||||||||||||| | |||  |||| ||||||||||||
Sbjct: 61  ttagggtagagcagcatgtaggggagcttggccgggccgttgcggttc 108



to top

>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence
          Length = 810

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||| || |||||||||||||  |  ||||| ||  |||| || | ||||
Sbjct: 792 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 733

                                                                      
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgag 270
           ||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||
Sbjct: 732 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 674



to top

>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence
          Length = 805

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||| || |||||||||||||  |  ||||| ||  |||| || | ||||
Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728

                                                                      
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgag 270
           ||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||
Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669



to top

>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence
          Length = 805

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||| || |||||||||||||  |  ||||| ||  |||| || | ||||
Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728

                                                                      
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgag 270
           ||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||
Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669



to top

>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence
          Length = 805

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||| || |||||||||||||  |  ||||| ||  |||| || | ||||
Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728

                                                                      
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgag 270
           ||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||
Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669



to top

>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence
          Length = 805

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||| || |||||||||||||  |  ||||| ||  |||| || | ||||
Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728

                                                                      
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgag 270
           ||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||
Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669



to top

>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence
          Length = 805

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||| || |||||||||||||  |  ||||| ||  |||| || | ||||
Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728

                                                                      
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgag 270
           ||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||
Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669



to top

>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence
          Length = 805

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||| || |||||||||||||  |  ||||| ||  |||| || | ||||
Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728

                                                                      
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgag 270
           ||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||
Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669



to top

>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence
          Length = 805

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||| || |||||||||||||  |  ||||| ||  |||| || | ||||
Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728

                                                                      
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgag 270
           ||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||
Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669



to top

>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence
          Length = 805

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||| || |||||||||||||  |  ||||| ||  |||| || | ||||
Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728

                                                                      
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgag 270
           ||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||
Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669



to top

>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence
          Length = 805

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||| || |||||||||||||  |  ||||| ||  |||| || | ||||
Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728

                                                                      
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgag 270
           ||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||
Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669



to top

>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence
          Length = 805

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||| || |||||||||||||  |  ||||| ||  |||| || | ||||
Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728

                                                                      
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgag 270
           ||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||
Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669



to top

>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence
          Length = 805

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||| || |||||||||||||  |  ||||| ||  |||| || | ||||
Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728

                                                                      
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgag 270
           ||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||
Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669



to top

>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence
          Length = 805

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||| || |||||||||||||  |  ||||| ||  |||| || | ||||
Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728

                                                                      
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgag 270
           ||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||
Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669



to top

>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence
          Length = 805

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||| || |||||||||||||  |  ||||| ||  |||| || | ||||
Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728

                                                                      
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgag 270
           ||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||
Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669



to top

>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence
          Length = 805

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 152 atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
           |||||||||||||| || |||||||||||||  |  ||||| ||  |||| || | ||||
Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728

                                                                      
Query: 212 gaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgag 270
           ||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||
Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669



to top

>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score =  107 bits (54), Expect = 2e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                        
Query: 152  atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
            ||||||||||||||||||||||||||||| |  ||||| || ||||||||  ||||||| 
Sbjct: 4658 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtca 4599

                                              
Query: 212  gaggtgttggggtagagcagcatgtagggaaact 245
            ||||||||||| ||||||||||||||||| ||||
Sbjct: 4598 gaggtgttgggatagagcagcatgtaggggaact 4565



to top

>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score =  107 bits (54), Expect = 2e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                        
Query: 152  atggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcg 211
            ||||||||||||||||||||||||||||| |  ||||| || ||||||||  ||||||| 
Sbjct: 2591 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtca 2532

                                              
Query: 212  gaggtgttggggtagagcagcatgtagggaaact 245
            ||||||||||| ||||||||||||||||| ||||
Sbjct: 2531 gaggtgttgggatagagcagcatgtaggggaact 2498



to top

>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score =  105 bits (53), Expect = 8e-20
 Identities = 104/121 (85%)
 Strand = Plus / Minus

                                                                        
Query: 150  aaatggagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggt 209
            |||||||||||||||| || |||||||||||||  |  ||||| ||| |||||||   ||
Sbjct: 2620 aaatggagatgctgtttggaatgcccttggcggtgatgccggcggcgtcgcccttcgtgt 2561

                                                                        
Query: 210  cggaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttga 269
            ||||||||||||||||||||||| ||||||| ||||   |||| ||||||||||||||||
Sbjct: 2560 cggaggtgttggggtagagcagcgtgtaggggaactcggccgggccgttgcggttcttga 2501

             
Query: 270  g 270
            |
Sbjct: 2500 g 2500



to top

>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                        
Query: 155  gagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcggag 214
            ||||||||||||||||||||||||||||  |  ||||| ||||||||  ||  |||||||
Sbjct: 2594 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggag 2535

                                                                     
Query: 215  gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagc 271
            ||||||||||| ||||||||||| || ||||   | || || |||||||||||||||
Sbjct: 2534 gtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagc 2478



to top

>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                         
Query: 155   gagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcggag 214
             ||||||||||||||||||||||||||||  |  ||||| ||||||||  ||  |||||||
Sbjct: 47230 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggag 47171

                                                                      
Query: 215   gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagc 271
             ||||||||||| ||||||||||| || ||||   | || || |||||||||||||||
Sbjct: 47170 gtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagc 47114



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                      
Query: 215   gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagc 271
             ||||||||||| ||||||||||| || | |||  |||||||||| ||||||||||||
Sbjct: 65746 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 65690



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 152   atggagatgctgttggggatgcccttggcgg 182
             |||||||||||||||||||||||| ||||||
Sbjct: 65812 atggagatgctgttggggatgcccatggcgg 65782



to top

>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 99/117 (84%)
 Strand = Plus / Plus

                                                                         
Query: 155   gagatgctgttggggatgcccttggcggaaagcccggcagcggcgcccttgtggtcggag 214
             ||||||||||||||||||||||||||||  |  ||||| ||||||||  ||  |||||||
Sbjct: 10793 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggag 10852

                                                                      
Query: 215   gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagc 271
             ||||||||||| ||||||||||| || ||||   | || || |||||||||||||||
Sbjct: 10853 gtgttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagc 10909



to top

>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                        
Query: 204  tgtggtcggaggtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggt 263
            |||||||||||||||| ||||||||||||||||| || |||||  |||||||| ||||||
Sbjct: 2602 tgtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 2543

                            
Query: 264  tcttgagctccgggtc 279
            |||| |||| ||||||
Sbjct: 2542 tctttagctgcgggtc 2527



to top

>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds
          Length = 3003

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                        
Query: 215  gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagctcc 274
            ||||||||||| |||||||||||||| | |||  | |||||||| |||||||||||| ||
Sbjct: 2694 gtgttggggtacagcagcatgtagggcatcttcacgggcccgttccggttcttgagcgcc 2635

                 
Query: 275  gggtc 279
            |||||
Sbjct: 2634 gggtc 2630



 Score = 46.1 bits (23), Expect = 0.060
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 152  atggagatgctgttggggatgcccttggcgg 182
            ||||||| |||||||||||||||| ||||||
Sbjct: 2760 atggagacgctgttggggatgcccatggcgg 2730



to top

>ref|XM_469412.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2686

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                     
Query: 215  gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagc 271
            ||||||||||| ||||||||||| || | |||  |||||||||| ||||||||||||
Sbjct: 2376 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2320



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 152  atggagatgctgttggggatgcccttggcgg 182
            |||||||||||||||||||||||| ||||||
Sbjct: 2442 atggagatgctgttggggatgcccatggcgg 2412



to top

>ref|XM_469411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3165

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                     
Query: 215  gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagc 271
            ||||||||||| ||||||||||| || | |||  |||||||||| ||||||||||||
Sbjct: 2855 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2799



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 152  atggagatgctgttggggatgcccttggcgg 182
            |||||||||||||||||||||||| ||||||
Sbjct: 2921 atggagatgctgttggggatgcccatggcgg 2891



to top

>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity
            lipoxygenase mRNA, complete cds
          Length = 3154

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                     
Query: 215  gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagc 271
            ||||||||||| ||||||||||| || | |||  |||||||||| ||||||||||||
Sbjct: 2849 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2793



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 152  atggagatgctgttggggatgcccttggcgg 182
            |||||||||||||||||||||||| ||||||
Sbjct: 2915 atggagatgctgttggggatgcccatggcgg 2885



to top

>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full
            insert sequence
          Length = 1560

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                     
Query: 215  gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagc 271
            ||||||||||| ||||||||||| || | |||  |||||||||| ||||||||||||
Sbjct: 1262 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 1206



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 152  atggagatgctgttggggatgcccttggcgg 182
            |||||||||||||||||||||||| ||||||
Sbjct: 1328 atggagatgctgttggggatgcccatggcgg 1298



to top

>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full
            insert sequence
          Length = 2851

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                     
Query: 215  gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagc 271
            ||||||||||| ||||||||||| || | |||  |||||||||| ||||||||||||
Sbjct: 2527 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2471



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 152  atggagatgctgttggggatgcccttggcgg 182
            |||||||||||||||||||||||| ||||||
Sbjct: 2593 atggagatgctgttggggatgcccatggcgg 2563



to top

>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full
            insert sequence
          Length = 3167

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                     
Query: 215  gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagc 271
            ||||||||||| ||||||||||| || | |||  |||||||||| ||||||||||||
Sbjct: 2857 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2801



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 152  atggagatgctgttggggatgcccttggcgg 182
            |||||||||||||||||||||||| ||||||
Sbjct: 2923 atggagatgctgttggggatgcccatggcgg 2893



to top

>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full
            insert sequence
          Length = 1726

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                     
Query: 215  gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgagc 271
            ||||||||||| ||||||||||| || | |||  |||||||||| ||||||||||||
Sbjct: 1427 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 1371



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 152  atggagatgctgttggggatgcccttggcgg 182
            |||||||||||||||||||||||| ||||||
Sbjct: 1493 atggagatgctgttggggatgcccatggcgg 1463



to top

>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds
          Length = 1814

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                         
Query: 152  atggagatgctgttggggatgcccttggc 180
            |||||||||||||||||||||||||||||
Sbjct: 1552 atggagatgctgttggggatgcccttggc 1524



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 215  gtgttggggtagagcagcatgtagggaaacttacccggcccgttgcggttcttgag 270
            |||||||||||||| ||||||||||| || ||  | ||||| || |||||||||||
Sbjct: 1486 gtgttggggtagagtagcatgtaggggaattttgctggcccattccggttcttgag 1431



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 150      aaatggagatgctgttggggatgccc 175
                ||||||||||||||||||||||||||
Sbjct: 22970458 aaatggagatgctgttggggatgccc 22970433



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 150      aaatggagatgctgttggggatgccc 175
                ||||||||||||||||||||||||||
Sbjct: 22898649 aaatggagatgctgttggggatgccc 22898624



to top

>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155568

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 150   aaatggagatgctgttggggatgccc 175
             ||||||||||||||||||||||||||
Sbjct: 79735 aaatggagatgctgttggggatgccc 79710



to top

>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA,
            complete cds
          Length = 3054

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 150  aaatggagatgctgttggggatgccc 175
            ||||||||||||||||||||||||||
Sbjct: 2914 aaatggagatgctgttggggatgccc 2889



to top

>emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:3 gene)
          Length = 2967

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 150  aaatggagatgctgttggggatgcc 174
            |||||||||||||||||||||||||
Sbjct: 2772 aaatggagatgctgttggggatgcc 2748



to top

>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete
             sequence
          Length = 158714

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 150   aaatggagatgctgttggggatgccctt 177
             |||||| |||||||||||||||||||||
Sbjct: 49249 aaatggtgatgctgttggggatgccctt 49276



to top

>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18,
              complete sequence
          Length = 122159

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 150    aaatggagatgctgttggggatgccctt 177
              |||||| |||||||||||||||||||||
Sbjct: 111408 aaatggtgatgctgttggggatgccctt 111435



to top

>gb|AY103567.1| Zea mays PCO116252 mRNA sequence
          Length = 3135

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 152  atggagatgctgttggggatgcccttggcggaaagccc 189
            ||||||||||||||||| |||||| |||| | ||||||
Sbjct: 2896 atggagatgctgttgggaatgcccatggcagtaagccc 2859



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 208     gtcggaggtgttggggtagagcagcatgtaggg 240
               |||||||||||||||| | |||||| |||||||
Sbjct: 1892951 gtcggaggtgttgggggacagcagcgtgtaggg 1892983



to top

>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0548D03
          Length = 156709

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 208   gtcggaggtgttggggtagagcagcatgtaggg 240
             |||||||||||||||| | |||||| |||||||
Sbjct: 21731 gtcggaggtgttgggggacagcagcgtgtaggg 21763



to top

>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0001H02
          Length = 147160

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 208   gtcggaggtgttggggtagagcagcatgtaggg 240
             |||||||||||||||| | |||||| |||||||
Sbjct: 93429 gtcggaggtgttgggggacagcagcgtgtaggg 93461



to top

>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence
          Length = 568

 Score = 42.1 bits (21), Expect = 0.94
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 152 atggagatgctgttggggatgcccttggc 180
           ||||||||||||||||| |||||| ||||
Sbjct: 363 atggagatgctgttgggaatgcccatggc 335



to top

>ref|XM_464447.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3123

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 152  atggagatgctgttggggatgccc 175
            |||||||||||||| |||||||||
Sbjct: 2877 atggagatgctgtttgggatgccc 2854



to top

>emb|AL078613.10|HSA354I12 Human DNA sequence from clone RP11-354I12 on chromosome 22 Contains an
             STS and GSSs, complete sequence
          Length = 60837

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    cacagacacacactacacca 82
             ||||||||||||||||||||
Sbjct: 58806 cacagacacacactacacca 58825



to top

>emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chromosome 11 Contains a
             pseudogene similar to part of ribosomal protein S2 (Rps2),
             a mitchondrial ribosomal protein S7 (Rpms7, MRP-S7)
             (Mrps7) pseudogene, a pseudogene similar to part of a
             novel protein, a novel gene and a eukaryotic translation
             initiation factor pseudogene, complete sequence
          Length = 196006

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   ttcttgagctccgggtcatg 282
             ||||||||||||||||||||
Sbjct: 51161 ttcttgagctccgggtcatg 51142



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 152     atggagatgctgttggggatgccc 175
               |||||||||||||| |||||||||
Sbjct: 5276967 atggagatgctgtttgggatgccc 5276990



to top

>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1225_F07
          Length = 142772

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 152  atggagatgctgttggggatgccc 175
            |||||||||||||| |||||||||
Sbjct: 3270 atggagatgctgtttgggatgccc 3293



to top

>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full
            insert sequence
          Length = 3160

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 152  atggagatgctgttggggatgccc 175
            |||||||||||||| |||||||||
Sbjct: 2876 atggagatgctgtttgggatgccc 2853



to top

>gb|U76687.2|PVU76687 Phaseolus vulgaris lipoxygenase mRNA, complete cds
          Length = 3038

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 148  ttaaatggagatgctgttggggat 171
            |||||| |||||||||||||||||
Sbjct: 2871 ttaaatagagatgctgttggggat 2848



to top

>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full
            insert sequence
          Length = 2250

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 152  atggagatgctgttggggatgccc 175
            |||||||||||||| |||||||||
Sbjct: 2038 atggagatgctgtttgggatgccc 2015



to top

>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence
          Length = 1304

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 152 atggagatgctgttggggatgccc 175
           |||||||||||| |||||||||||
Sbjct: 138 atggagatgctgctggggatgccc 161



to top

>gb|AY104322.1| Zea mays PCO093659 mRNA sequence
          Length = 1439

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 152  atggagatgctgttggggatgccc 175
            |||||||||||| |||||||||||
Sbjct: 1210 atggagatgctgctggggatgccc 1187



to top

>emb|AL954813.14| Mouse DNA sequence from clone RP24-541E15 on chromosome 4, complete
             sequence
          Length = 140383

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    cacagacacacactacacca 82
             ||||||||||||||||||||
Sbjct: 40251 cacagacacacactacacca 40232


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,575,215
Number of Sequences: 3902068
Number of extensions: 2575215
Number of successful extensions: 53427
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53180
Number of HSP's gapped (non-prelim): 227
length of query: 284
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 262
effective length of database: 17,147,199,772
effective search space: 4492566340264
effective search space used: 4492566340264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top