ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast28g06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_472919.1| Oryza sativa (japonica cultivar-group), predic... 143 5e-31
2emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4,... 143 5e-31
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 143 5e-31
4emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 143 5e-31
5ref|XM_472918.1| Oryza sativa (japonica cultivar-group), predic... 74 4e-10
6dbj|AK109152.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
7ref|XM_465436.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
9dbj|AP005608.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
10dbj|AK064156.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
11emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 46 0.089
12dbj|AK108867.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.089
13gb|AC165229.7| Mus musculus chromosome 1, clone RP23-47K10, comp... 44 0.35
14gb|AC122204.3| Mus musculus BAC clone RP23-73N8 from chromosome ... 44 0.35
15emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 44 0.35
16ref|XM_366710.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 42 1.4
17gb|DQ127574.1| Emiliania huxleyi virus 163 clone combi155+156.se... 42 1.4
18emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete ... 42 1.4
19emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 42 1.4
20gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.5
21ref|XM_417423.1| PREDICTED: Gallus gallus similar to neural zinc... 40 5.5
22gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.5
23ref|NM_014994.1| Homo sapiens mitogen activated protein kinase b... 40 5.5
24gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 5.5
25gb|BC036660.1| Homo sapiens mitogen activated protein kinase bin... 40 5.5
26emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.5
27gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 5.5
28emb|BX950844.1| Gallus gallus finished cDNA, clone ChEST672b12 40 5.5
29gb|AC020659.5|AC020659 Homo sapiens chromosome 15 clone RP11-23P... 40 5.5
30dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.5
31dbj|AB177850.1| Homo sapiens mRNA for KIAA0596 splice variant 1 40 5.5
32gb|AY585170.1| Plenoculus sp. Plsp810 elongation factor-1 alpha ... 40 5.5
33emb|BX648786.1|HSM808937 Homo sapiens mRNA; cDNA DKFZp686A24169 ... 40 5.5
34emb|BX640787.1|HSM806877 Homo sapiens mRNA; cDNA DKFZp686K2432 (... 40 5.5
35gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 5.5
36emb|AL833267.1|HSM804580 Homo sapiens mRNA; cDNA DKFZp451I0110 (... 40 5.5
37dbj|AB011168.2| Homo sapiens mRNA for KIAA0596 protein, partial cds 40 5.5

>ref|XM_472919.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1038

 Score =  143 bits (72), Expect = 5e-31
 Identities = 105/116 (90%)
 Strand = Plus / Minus

                                                                        
Query: 219  acggagccggccgcccaggcgccggcgtcccgcacgaacgcgacggccgcctcacactcg 278
            |||||| |||||||||||  ||||| ||||||||||||||||||| ||||||| | ||||
Sbjct: 1013 acggaggcggccgcccagatgccggtgtcccgcacgaacgcgacgaccgcctcgctctcg 954

                                                                    
Query: 279  gcgatcacgagcttgtcggccccgggcctcgtgatcggcgggaagaagagccagaa 334
            |||||||| | ||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 953  gcgatcaccaccttgtcggcgccggccctcgtgatcggcgggaagaagagccagaa 898



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>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17,
             complete sequence
          Length = 129498

 Score =  143 bits (72), Expect = 5e-31
 Identities = 105/116 (90%)
 Strand = Plus / Plus

                                                                         
Query: 219   acggagccggccgcccaggcgccggcgtcccgcacgaacgcgacggccgcctcacactcg 278
             |||||| |||||||||||  ||||| ||||||||||||||||||| ||||||| | ||||
Sbjct: 73668 acggaggcggccgcccagatgccggtgtcccgcacgaacgcgacgaccgcctcgctctcg 73727

                                                                     
Query: 279   gcgatcacgagcttgtcggccccgggcctcgtgatcggcgggaagaagagccagaa 334
             |||||||| | ||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 73728 gcgatcaccaccttgtcggcgccggccctcgtgatcggcgggaagaagagccagaa 73783



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 103/125 (82%)
 Strand = Plus / Plus

                                                                         
Query: 240   ccggcgtcccgcacgaacgcgacggccgcctcacactcggcgatcacgagcttgtcggcc 299
             ||||||||||| |||||||||||    ||||| | ||| |||||||| | | |||| | |
Sbjct: 70781 ccggcgtcccgaacgaacgcgaccatggcctcgctctccgcgatcaccaccctgtcagtc 70840

                                                                         
Query: 300   ccgggcctcgtgatcggcgggaagaagagccagaaggccgtcacgagcacgaacgccagc 359
             |||| ||||||||||||||||| || |||||||||  ||||| | || | ||||||||||
Sbjct: 70841 ccggtcctcgtgatcggcgggacgatgagccagaaccccgtcgctaggatgaacgccagc 70900

                  
Query: 360   gtcag 364
             |||||
Sbjct: 70901 gtcag 70905



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  143 bits (72), Expect = 5e-31
 Identities = 105/116 (90%)
 Strand = Plus / Plus

                                                                            
Query: 219      acggagccggccgcccaggcgccggcgtcccgcacgaacgcgacggccgcctcacactcg 278
                |||||| |||||||||||  ||||| ||||||||||||||||||| ||||||| | ||||
Sbjct: 24076689 acggaggcggccgcccagatgccggtgtcccgcacgaacgcgacgaccgcctcgctctcg 24076748

                                                                        
Query: 279      gcgatcacgagcttgtcggccccgggcctcgtgatcggcgggaagaagagccagaa 334
                |||||||| | ||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 24076749 gcgatcaccaccttgtcggcgccggccctcgtgatcggcgggaagaagagccagaa 24076804



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 103/125 (82%)
 Strand = Plus / Plus

                                                                            
Query: 240      ccggcgtcccgcacgaacgcgacggccgcctcacactcggcgatcacgagcttgtcggcc 299
                ||||||||||| |||||||||||    ||||| | ||| |||||||| | | |||| | |
Sbjct: 24073802 ccggcgtcccgaacgaacgcgaccatggcctcgctctccgcgatcaccaccctgtcagtc 24073861

                                                                            
Query: 300      ccgggcctcgtgatcggcgggaagaagagccagaaggccgtcacgagcacgaacgccagc 359
                |||| ||||||||||||||||| || |||||||||  ||||| | || | ||||||||||
Sbjct: 24073862 ccggtcctcgtgatcggcgggacgatgagccagaaccccgtcgctaggatgaacgccagc 24073921

                     
Query: 360      gtcag 364
                |||||
Sbjct: 24073922 gtcag 24073926



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 312      atcggcgggaagaagagccagaa 334
                |||||||||||||||||||||||
Sbjct: 11774046 atcggcgggaagaagagccagaa 11774024



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>emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0510A06, complete
             sequence
          Length = 90767

 Score =  143 bits (72), Expect = 5e-31
 Identities = 105/116 (90%)
 Strand = Plus / Plus

                                                                         
Query: 219   acggagccggccgcccaggcgccggcgtcccgcacgaacgcgacggccgcctcacactcg 278
             |||||| |||||||||||  ||||| ||||||||||||||||||| ||||||| | ||||
Sbjct: 55500 acggaggcggccgcccagatgccggtgtcccgcacgaacgcgacgaccgcctcgctctcg 55559

                                                                     
Query: 279   gcgatcacgagcttgtcggccccgggcctcgtgatcggcgggaagaagagccagaa 334
             |||||||| | ||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 55560 gcgatcaccaccttgtcggcgccggccctcgtgatcggcgggaagaagagccagaa 55615



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 103/125 (82%)
 Strand = Plus / Plus

                                                                         
Query: 240   ccggcgtcccgcacgaacgcgacggccgcctcacactcggcgatcacgagcttgtcggcc 299
             ||||||||||| |||||||||||    ||||| | ||| |||||||| | | |||| | |
Sbjct: 52640 ccggcgtcccgaacgaacgcgaccatggcctcgctctccgcgatcaccaccctgtcagtc 52699

                                                                         
Query: 300   ccgggcctcgtgatcggcgggaagaagagccagaaggccgtcacgagcacgaacgccagc 359
             |||| ||||||||||||||||| || |||||||||  ||||| | || | ||||||||||
Sbjct: 52700 ccggtcctcgtgatcggcgggacgatgagccagaaccccgtcgctaggatgaacgccagc 52759

                  
Query: 360   gtcag 364
             |||||
Sbjct: 52760 gtcag 52764



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>ref|XM_472918.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1050

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 103/125 (82%)
 Strand = Plus / Minus

                                                                        
Query: 240  ccggcgtcccgcacgaacgcgacggccgcctcacactcggcgatcacgagcttgtcggcc 299
            ||||||||||| |||||||||||    ||||| | ||| |||||||| | | |||| | |
Sbjct: 1001 ccggcgtcccgaacgaacgcgaccatggcctcgctctccgcgatcaccaccctgtcagtc 942

                                                                        
Query: 300  ccgggcctcgtgatcggcgggaagaagagccagaaggccgtcacgagcacgaacgccagc 359
            |||| ||||||||||||||||| || |||||||||  ||||| | || | ||||||||||
Sbjct: 941  ccggtcctcgtgatcggcgggacgatgagccagaaccccgtcgctaggatgaacgccagc 882

                 
Query: 360  gtcag 364
            |||||
Sbjct: 881  gtcag 877



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>dbj|AK109152.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F11, full
            insert sequence
          Length = 1321

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 103/125 (82%)
 Strand = Plus / Minus

                                                                        
Query: 240  ccggcgtcccgcacgaacgcgacggccgcctcacactcggcgatcacgagcttgtcggcc 299
            ||||||||||| |||||||||||    ||||| | ||| |||||||| | | |||| | |
Sbjct: 1067 ccggcgtcccgaacgaacgcgaccatggcctcgctctccgcgatcaccaccctgtcagtc 1008

                                                                        
Query: 300  ccgggcctcgtgatcggcgggaagaagagccagaaggccgtcacgagcacgaacgccagc 359
            |||| ||||||||||||||||| || |||||||||  ||||| | || | ||||||||||
Sbjct: 1007 ccggtcctcgtgatcggcgggacgatgagccagaaccccgtcgctaggatgaacgccagc 948

                 
Query: 360  gtcag 364
            |||||
Sbjct: 947  gtcag 943



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>ref|XM_465436.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1602

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 317 cgggaagaagagccagaaggccgtcacgagcacgaacgccagcgtcagcgg 367
           ||||||||||||||||||  ||||| ||  |||||||||||| ||||||||
Sbjct: 971 cgggaagaagagccagaaccccgtcccggccacgaacgccagagtcagcgg 921



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 317      cgggaagaagagccagaaggccgtcacgagcacgaacgccagcgtcagcgg 367
                ||||||||||||||||||  ||||| ||  |||||||||||| ||||||||
Sbjct: 15145473 cgggaagaagagccagaaccccgtcccggccacgaacgccagagtcagcgg 15145423



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>dbj|AP005608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0008C07
          Length = 146008

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 317   cgggaagaagagccagaaggccgtcacgagcacgaacgccagcgtcagcgg 367
             ||||||||||||||||||  ||||| ||  |||||||||||| ||||||||
Sbjct: 29248 cgggaagaagagccagaaccccgtcccggccacgaacgccagagtcagcgg 29198



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>dbj|AK064156.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-F04, full
           insert sequence
          Length = 1615

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 317 cgggaagaagagccagaaggccgtcacgagcacgaacgccagcgtcagcgg 367
           ||||||||||||||||||  ||||| ||  |||||||||||| ||||||||
Sbjct: 971 cgggaagaagagccagaaccccgtcccggccacgaacgccagagtcagcgg 921



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>emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009K15,
             complete sequence
          Length = 185021

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 312   atcggcgggaagaagagccagaa 334
             |||||||||||||||||||||||
Sbjct: 96824 atcggcgggaagaagagccagaa 96802



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>dbj|AK108867.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-C03, full
            insert sequence
          Length = 1268

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 312  atcggcgggaagaagagccagaa 334
            |||||||||||||||||||||||
Sbjct: 1021 atcggcgggaagaagagccagaa 999



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>gb|AC165229.7| Mus musculus chromosome 1, clone RP23-47K10, complete sequence
          Length = 218929

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 63     ggatttgtttcgatacattttcctaa 88
              |||||||||| |||||||||||||||
Sbjct: 218774 ggatttgtttagatacattttcctaa 218749



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>gb|AC122204.3| Mus musculus BAC clone RP23-73N8 from chromosome 1, complete sequence
          Length = 197949

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 63     ggatttgtttcgatacattttcctaa 88
              |||||||||| |||||||||||||||
Sbjct: 121611 ggatttgtttagatacattttcctaa 121636



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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 220    cggagccggccgcccaggcgccggcg 245
              ||||||||||||||||||| ||||||
Sbjct: 410754 cggagccggccgcccaggccccggcg 410779



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>ref|XM_366710.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG02786.4) partial mRNA
          Length = 1251

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 331 agaaggccgtcacgagcacga 351
           |||||||||||||||||||||
Sbjct: 830 agaaggccgtcacgagcacga 810



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>gb|DQ127574.1| Emiliania huxleyi virus 163 clone combi155+156.seq partial sequence
          Length = 3207

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 110 aatacgcaaacaaattgccgc 130
           |||||||||||||||||||||
Sbjct: 820 aatacgcaaacaaattgccgc 800



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>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 241    cggcgtcccgcacgaacgcgacggc 265
              ||||||||||||||||||| |||||
Sbjct: 223172 cggcgtcccgcacgaacgctacggc 223196



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>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86
          Length = 407339

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 110    aatacgcaaacaaattgccgc 130
              |||||||||||||||||||||
Sbjct: 221852 aatacgcaaacaaattgccgc 221832



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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    cgcacgaacgcgacggccgc 268
              ||||||||||||||||||||
Sbjct: 984758 cgcacgaacgcgacggccgc 984739



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>ref|XM_417423.1| PREDICTED: Gallus gallus similar to neural zinc finger protein
           NZF-2b (LOC419249), mRNA
          Length = 1646

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 316 gcgggaagaagagccagaag 335
           ||||||||||||||||||||
Sbjct: 488 gcgggaagaagagccagaag 507



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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 249     cgcacgaacgcgacggccgc 268
               ||||||||||||||||||||
Sbjct: 2026513 cgcacgaacgcgacggccgc 2026494



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>ref|NM_014994.1| Homo sapiens mitogen activated protein kinase binding protein 1
            (MAPKBP1), mRNA
          Length = 7174

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 353  cgccagcgtcagcggggtggcaaccagc 380
            ||||||||||||||||| ||||| ||||
Sbjct: 2430 cgccagcgtcagcggggcggcaagcagc 2457



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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    gccggccgcccaggcgccgg 243
              ||||||||||||||||||||
Sbjct: 434235 gccggccgcccaggcgccgg 434216



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>gb|BC036660.1| Homo sapiens mitogen activated protein kinase binding protein 1, mRNA
            (cDNA clone MGC:33222 IMAGE:5266613), complete cds
          Length = 4824

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 353  cgccagcgtcagcggggtggcaaccagc 380
            ||||||||||||||||| ||||| ||||
Sbjct: 2325 cgccagcgtcagcggggcggcaagcagc 2352



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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 249     cgcacgaacgcgacggccgc 268
               ||||||||||||||||||||
Sbjct: 2350154 cgcacgaacgcgacggccgc 2350173



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 355     ccagcgtcagcggggtggca 374
               ||||||||||||||||||||
Sbjct: 3619927 ccagcgtcagcggggtggca 3619908



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>emb|BX950844.1| Gallus gallus finished cDNA, clone ChEST672b12
          Length = 1100

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 316 gcgggaagaagagccagaag 335
           ||||||||||||||||||||
Sbjct: 489 gcgggaagaagagccagaag 508



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>gb|AC020659.5|AC020659 Homo sapiens chromosome 15 clone RP11-23P13 map 15q14, complete
             sequence
          Length = 139376

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 353   cgccagcgtcagcggggtggcaaccagc 380
             ||||||||||||||||| ||||| ||||
Sbjct: 59772 cgccagcgtcagcggggcggcaagcagc 59799



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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 343     cgagcacgaacgccagcgtcagcg 366
               ||||||||| ||||||||||||||
Sbjct: 3946007 cgagcacgaccgccagcgtcagcg 3946030



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>dbj|AB177850.1| Homo sapiens mRNA for KIAA0596 splice variant 1
          Length = 5520

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 353  cgccagcgtcagcggggtggcaaccagc 380
            ||||||||||||||||| ||||| ||||
Sbjct: 1358 cgccagcgtcagcggggcggcaagcagc 1385



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>gb|AY585170.1| Plenoculus sp. Plsp810 elongation factor-1 alpha gene, partial cds
          Length = 1616

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 250 gcacgaacgcgacggccgcc 269
           ||||||||||||||||||||
Sbjct: 432 gcacgaacgcgacggccgcc 413



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>emb|BX648786.1|HSM808937 Homo sapiens mRNA; cDNA DKFZp686A24169 (from clone DKFZp686A24169)
          Length = 6647

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 353  cgccagcgtcagcggggtggcaaccagc 380
            ||||||||||||||||| ||||| ||||
Sbjct: 2461 cgccagcgtcagcggggcggcaagcagc 2488



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>emb|BX640787.1|HSM806877 Homo sapiens mRNA; cDNA DKFZp686K2432 (from clone DKFZp686K2432)
          Length = 5939

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 353  cgccagcgtcagcggggtggcaaccagc 380
            ||||||||||||||||| ||||| ||||
Sbjct: 2675 cgccagcgtcagcggggcggcaagcagc 2702



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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 249     cgcacgaacgcgacggccgc 268
               ||||||||||||||||||||
Sbjct: 2990526 cgcacgaacgcgacggccgc 2990545



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>emb|AL833267.1|HSM804580 Homo sapiens mRNA; cDNA DKFZp451I0110 (from clone DKFZp451I0110)
          Length = 7174

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 353  cgccagcgtcagcggggtggcaaccagc 380
            ||||||||||||||||| ||||| ||||
Sbjct: 2430 cgccagcgtcagcggggcggcaagcagc 2457



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>dbj|AB011168.2| Homo sapiens mRNA for KIAA0596 protein, partial cds
          Length = 7161

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 353  cgccagcgtcagcggggtggcaaccagc 380
            ||||||||||||||||| ||||| ||||
Sbjct: 2438 cgccagcgtcagcggggcggcaagcagc 2465


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,209,504
Number of Sequences: 3902068
Number of extensions: 2209504
Number of successful extensions: 43365
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42529
Number of HSP's gapped (non-prelim): 831
length of query: 408
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 386
effective length of database: 17,147,199,772
effective search space: 6618819111992
effective search space used: 6618819111992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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