ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast28e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475953.1| Oryza sativa (japonica cultivar-group), predic... 121 2e-24
2gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
4dbj|AK105906.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
5dbj|AK069785.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
6gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
7ref|NM_188440.1| Oryza sativa (japonica cultivar-group), predic... 105 1e-19
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
9dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
10dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
11dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 100 7e-18
12dbj|AP003762.3| Oryza sativa (japonica cultivar-group) genomic D... 100 7e-18
13dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic D... 100 7e-18
14ref|XM_463401.1| Oryza sativa (japonica cultivar-group), predic... 60 6e-06
15dbj|AP003220.6| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
16dbj|AP002839.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
17dbj|AK071156.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
18ref|XM_475951.1| Oryza sativa (japonica cultivar-group), predic... 58 2e-05
19dbj|AK070825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
20ref|XM_475952.1| Oryza sativa (japonica cultivar-group), predic... 56 9e-05
21dbj|AK109766.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 9e-05
22emb|BX901895.15| Zebrafish DNA sequence from clone CH211-218C11 ... 42 1.3
23emb|CR361563.10| Zebrafish DNA sequence from clone CH211-254L20 ... 42 1.3
24emb|AL591391.5| Zebrafish DNA sequence from clone BUSM1-186F8 in... 42 1.3
25emb|AL591406.6| Zebrafish DNA sequence from clone BUSM1-213M14 i... 42 1.3
26gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.3
27emb|AL591418.11| Zebrafish DNA sequence from clone BUSM1-139E19 ... 42 1.3
28gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome 40 5.2
29gb|AC117723.8| Mus musculus chromosome 1, clone RP24-232C21, com... 40 5.2
30gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 5.2
31gb|AC127696.4| Mus musculus BAC clone RP23-459J11 from chromosom... 40 5.2
32gb|AC118487.4| Rattus norvegicus 2 BAC CH230-285C2 (Children's H... 40 5.2
33emb|BX572083.6| Zebrafish DNA sequence from clone DKEY-232J4 in ... 40 5.2
34gb|AY950802.1| Bacteriophage SH1, complete genome 40 5.2
35gb|AC011511.12| Homo sapiens chromosome 19 clone CTD-2369P2, com... 40 5.2
36emb|BX537141.17| Zebrafish DNA sequence from clone DKEY-9E8 in l... 40 5.2
37gb|AC023395.8| Homo sapiens chromosome 18, clone RP11-484N16, co... 40 5.2
38gb|AC021701.8| Homo sapiens chromosome 18, clone RP11-704G7, com... 40 5.2
39gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 5.2
40dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
41dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
42dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
43gb|AE004557.1| Pseudomonas aeruginosa PAO1, section 118 of 529 o... 40 5.2
44dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 5.2
45gb|AC008572.6|AC008572 Homo sapiens chromosome 5 clone CTC-551A1... 40 5.2
46dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
47dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
48dbj|AP003877.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
49ref|XM_320009.2| Anopheles gambiae str. PEST ENSANGP00000010585 ... 40 5.2
50ref|NM_210740.1| Eremothecium gossypii AFL164Cp (AFL164C), mRNA 40 5.2
51gb|AC102304.6| Mus musculus chromosome 7, clone RP24-403P14, com... 40 5.2
52gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
53emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.2
54gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete ge... 40 5.2 
>ref|XM_475953.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1329

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                        
Query: 156  cctcaatcatctcctgcgtcgcgcggccgttgtccgccggcacgaggtgcccggcgccgt 215
            |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1270 cctcgatcatctcctgcgccgcgcggccgttgtccgccggcatgaggtgcccggcgccgt 1211

                                                                 
Query: 216  acaccaccacgtgcgtcagcgcccccgaccgctgcacgtacccggcgagctcc 268
            | || || ||||| |  ||||  || || ||||||||||||||||||||||||
Sbjct: 1210 agacgacgacgtgggagagcgggccggagcgctgcacgtacccggcgagctcc 1158



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                        
Query: 281  tcgccggtccgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgc 340
            |||||| | |||||||||||||| ||||||||  |||| ||| |||||||| ||||   |
Sbjct: 1157 tcgccgatgcgccacacggcgcggtcggcgtcgaggaaggcgggcaggccgtcccactcc 1098

                                                                
Query: 341  agctcctgcatccacgcctcctgcgacacgacgccgtcccggaggtcgcgga 392
            |||||| ||||||||||||||  ||| || |||||||||| |||||||||||
Sbjct: 1097 agctcccgcatccacgcctccgtcgataccacgccgtccctgaggtcgcgga 1046
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>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11,
              complete sequence
          Length = 112796

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                          
Query: 156    cctcaatcatctcctgcgtcgcgcggccgttgtccgccggcacgaggtgcccggcgccgt 215
              |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 103850 cctcgatcatctcctgcgccgcgcggccgttgtccgccggcatgaggtgcccggcgccgt 103791

                                                                   
Query: 216    acaccaccacgtgcgtcagcgcccccgaccgctgcacgtacccggcgagctcc 268
              | || || ||||| |  ||||  || || ||||||||||||||||||||||||
Sbjct: 103790 agacgacgacgtgggagagcgggccggagcgctgcacgtacccggcgagctcc 103738



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                          
Query: 281    tcgccggtccgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgc 340
              |||||| | |||||||||||||| ||||||||  |||| ||| |||||||| ||||   |
Sbjct: 103737 tcgccgatgcgccacacggcgcggtcggcgtcgaggaaggcgggcaggccgtcccactcc 103678

                                                                  
Query: 341    agctcctgcatccacgcctcctgcgacacgacgccgtcccggaggtcgcgga 392
              |||||| ||||||||||||||  ||| || |||||||||| |||||||||||
Sbjct: 103677 agctcccgcatccacgcctccgtcgataccacgccgtccctgaggtcgcgga 103626



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                              
Query: 290   cgccacacggcgcgctcggcgtcctggaacgcg 322
             |||||||||||||| ||||||||||||||||||
Sbjct: 95647 cgccacacggcgcggtcggcgtcctggaacgcg 95615



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                         
Query: 290   cgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgcagctcctgc 349
             ||||||||||||||  |||||||||||||||||   |||||| ||||   ||||||| ||
Sbjct: 99836 cgccacacggcgcggccggcgtcctggaacgcggcgaggccgtcccactccagctcccgc 99777

                         
Query: 350   atccacgcctcc 361
             | ||||||||||
Sbjct: 99776 agccacgcctcc 99765



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 245   cgctgcacgtacccggcgagc 265
             |||||||||||||||||||||
Sbjct: 99869 cgctgcacgtacccggcgagc 99849
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                            
Query: 156      cctcaatcatctcctgcgtcgcgcggccgttgtccgccggcacgaggtgcccggcgccgt 215
                |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 28785137 cctcgatcatctcctgcgccgcgcggccgttgtccgccggcatgaggtgcccggcgccgt 28785078

                                                                     
Query: 216      acaccaccacgtgcgtcagcgcccccgaccgctgcacgtacccggcgagctcc 268
                | || || ||||| |  ||||  || || ||||||||||||||||||||||||
Sbjct: 28785077 agacgacgacgtgggagagcgggccggagcgctgcacgtacccggcgagctcc 28785025



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                            
Query: 281      tcgccggtccgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgc 340
                |||||| | |||||||||||||| ||||||||  |||| ||| |||||||| ||||   |
Sbjct: 28785024 tcgccgatgcgccacacggcgcggtcggcgtcgaggaaggcgggcaggccgtcccactcc 28784965

                                                                    
Query: 341      agctcctgcatccacgcctcctgcgacacgacgccgtcccggaggtcgcgga 392
                |||||| ||||||||||||||  ||| || |||||||||| |||||||||||
Sbjct: 28784964 agctcccgcatccacgcctccgtcgataccacgccgtccctgaggtcgcgga 28784913



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                                 
Query: 290      cgccacacggcgcgctcggcgtcctggaacgcg 322
                |||||||||||||| ||||||||||||||||||
Sbjct: 28776934 cgccacacggcgcggtcggcgtcctggaacgcg 28776902



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                            
Query: 290      cgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgcagctcctgc 349
                ||||||||||||||  |||||||||||||||||   |||||| ||||   ||||||| ||
Sbjct: 28781123 cgccacacggcgcggccggcgtcctggaacgcggcgaggccgtcccactccagctcccgc 28781064

                            
Query: 350      atccacgcctcc 361
                | ||||||||||
Sbjct: 28781063 agccacgcctcc 28781052



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 245      cgctgcacgtacccggcgagc 265
                |||||||||||||||||||||
Sbjct: 28781156 cgctgcacgtacccggcgagc 28781136
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>dbj|AK105906.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-G02, full
            insert sequence
          Length = 1482

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                        
Query: 156  cctcaatcatctcctgcgtcgcgcggccgttgtccgccggcacgaggtgcccggcgccgt 215
            |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1304 cctcgatcatctcctgcgccgcgcggccgttgtccgccggcatgaggtgcccggcgccgt 1245

                                                                 
Query: 216  acaccaccacgtgcgtcagcgcccccgaccgctgcacgtacccggcgagctcc 268
            | || || ||||| |  ||||  || || ||||||||||||||||||||||||
Sbjct: 1244 agacgacgacgtgggagagcgggccggagcgctgcacgtacccggcgagctcc 1192



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                        
Query: 281  tcgccggtccgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgc 340
            |||||| | |||||||||||||| ||||||||  |||| ||| |||||||| ||||   |
Sbjct: 1191 tcgccgatgcgccacacggcgcggtcggcgtcgaggaaggcgggcaggccgtcccactcc 1132

                                                                
Query: 341  agctcctgcatccacgcctcctgcgacacgacgccgtcccggaggtcgcgga 392
            |||||| ||||||||||||||  ||| || |||||||||| |||||||||||
Sbjct: 1131 agctcccgcatccacgcctccgtcgataccacgccgtccctgaggtcgcgga 1080
to top
>dbj|AK069785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031H02, full
            insert sequence
          Length = 1705

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                        
Query: 156  cctcaatcatctcctgcgtcgcgcggccgttgtccgccggcacgaggtgcccggcgccgt 215
            |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1340 cctcgatcatctcctgcgccgcgcggccgttgtccgccggcatgaggtgcccggcgccgt 1281

                                                                 
Query: 216  acaccaccacgtgcgtcagcgcccccgaccgctgcacgtacccggcgagctcc 268
            | || || ||||| |  ||||  || || ||||||||||||||||||||||||
Sbjct: 1280 agacgacgacgtgggagagcgggccggagcgctgcacgtacccggcgagctcc 1228



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                        
Query: 281  tcgccggtccgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgc 340
            |||||| | |||||||||||||| ||||||||  |||| ||| |||||||| ||||   |
Sbjct: 1227 tcgccgatgcgccacacggcgcggtcggcgtcgaggaaggcgggcaggccgtcccactcc 1168

                                                                
Query: 341  agctcctgcatccacgcctcctgcgacacgacgccgtcccggaggtcgcgga 392
            |||||| ||||||||||||||  ||| || |||||||||| |||||||||||
Sbjct: 1167 agctcccgcatccacgcctccgtcgataccacgccgtccctgaggtcgcgga 1116
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>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0035N21, complete sequence
          Length = 128331

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/113 (88%)
 Strand = Plus / Plus

                                                                         
Query: 156   cctcaatcatctcctgcgtcgcgcggccgttgtccgccggcacgaggtgcccggcgccgt 215
             |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 88330 cctcgatcatctcctgcgccgcgcggccgttgtccgccggcatgaggtgcccggcgccgt 88389

                                                                  
Query: 216   acaccaccacgtgcgtcagcgcccccgaccgctgcacgtacccggcgagctcc 268
             | || || ||||| |  ||||  || || ||||||||||||||||||||||||
Sbjct: 88390 agacgacgacgtgggagagcgggccggagcgctgcacgtacccggcgagctcc 88442



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                         
Query: 281   tcgccggtccgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgc 340
             |||||| | |||||||||||||| ||||||||  |||| ||| |||||||| ||||   |
Sbjct: 88443 tcgccgatgcgccacacggcgcggtcggcgtcgaggaaggcgggcaggccgtcccactcc 88502

                                                                 
Query: 341   agctcctgcatccacgcctcctgcgacacgacgccgtcccggaggtcgcgga 392
             |||||| ||||||||||||||  ||| || |||||||||| |||||||||||
Sbjct: 88503 agctcccgcatccacgcctccgtcgataccacgccgtccctgaggtcgcgga 88554



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                              
Query: 290   cgccacacggcgcgctcggcgtcctggaacgcg 322
             |||||||||||||| ||||||||||||||||||
Sbjct: 96533 cgccacacggcgcggtcggcgtcctggaacgcg 96565



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                         
Query: 290   cgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgcagctcctgc 349
             ||||||||||||||  |||||||||||||||||   |||||| ||||   ||||||| ||
Sbjct: 92344 cgccacacggcgcggccggcgtcctggaacgcggcgaggccgtcccactccagctcccgc 92403

                         
Query: 350   atccacgcctcc 361
             | ||||||||||
Sbjct: 92404 agccacgcctcc 92415



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 245   cgctgcacgtacccggcgagc 265
             |||||||||||||||||||||
Sbjct: 92311 cgctgcacgtacccggcgagc 92331
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>ref|NM_188440.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1290

 Score =  105 bits (53), Expect = 1e-19
 Identities = 98/113 (86%)
 Strand = Plus / Minus

                                                                        
Query: 156  cctcaatcatctcctgcgtcgcgcggccgttgtccgccggcacgaggtgcccggcgccgt 215
            |||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 1231 cctcgatcatctcctgcgccacgcggccgttgtccgccggcacgaggtgcccggcgccgt 1172

                                                                 
Query: 216  acaccaccacgtgcgtcagcgcccccgaccgctgcacgtacccggcgagctcc 268
              || |  ||||| |  ||||  || || ||||||||||||||||||||||||
Sbjct: 1171 cgacaatgacgtgggagagcgggccggagcgctgcacgtacccggcgagctcc 1119



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 87/106 (82%)
 Strand = Plus / Minus

                                                                        
Query: 281  tcgccggtccgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgc 340
            |||||| | |||||||||||||| |||||| |  |||| |||  ||||||| ||||    
Sbjct: 1118 tcgccgatgcgccacacggcgcggtcggcgacgaggaaggcggtcaggccgtcccacttg 1059

                                                          
Query: 341  agctcctgcatccacgcctcctgcgacacgacgccgtcccggaggt 386
            |||||| ||||||||||||||  |||||| |||||||||| |||||
Sbjct: 1058 agctcccgcatccacgcctccgtcgacaccacgccgtccctgaggt 1013
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  105 bits (53), Expect = 1e-19
 Identities = 98/113 (86%)
 Strand = Plus / Minus

                                                                           
Query: 156     cctcaatcatctcctgcgtcgcgcggccgttgtccgccggcacgaggtgcccggcgccgt 215
               |||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 6296275 cctcgatcatctcctgcgccacgcggccgttgtccgccggcacgaggtgcccggcgccgt 6296216

                                                                    
Query: 216     acaccaccacgtgcgtcagcgcccccgaccgctgcacgtacccggcgagctcc 268
                 || |  ||||| |  ||||  || || ||||||||||||||||||||||||
Sbjct: 6296215 cgacaatgacgtgggagagcgggccggagcgctgcacgtacccggcgagctcc 6296163



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                  
Query: 233      agcgcccccgaccgctgcacgtacccggcgagct 266
                ||||||||||||| ||||||||||||||||||||
Sbjct: 25141868 agcgcccccgacctctgcacgtacccggcgagct 25141835



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 87/106 (82%)
 Strand = Plus / Minus

                                                                           
Query: 281     tcgccggtccgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgc 340
               |||||| | |||||||||||||| |||||| |  |||| |||  ||||||| ||||    
Sbjct: 6296162 tcgccgatgcgccacacggcgcggtcggcgacgaggaaggcggtcaggccgtcccacttg 6296103

                                                             
Query: 341     agctcctgcatccacgcctcctgcgacacgacgccgtcccggaggt 386
               |||||| ||||||||||||||  |||||| |||||||||| |||||
Sbjct: 6296102 agctcccgcatccacgcctccgtcgacaccacgccgtccctgaggt 6296057



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 289      ccgccacacggcgcgctcggcgtcctggaacgcgcgcaggcc 330
                |||||||||||||||||| ||| |  ||||||||| ||||||
Sbjct: 25141821 ccgccacacggcgcgctccgcggcgaggaacgcgcccaggcc 25141780
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>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0038J17
          Length = 180186

 Score =  105 bits (53), Expect = 1e-19
 Identities = 98/113 (86%)
 Strand = Plus / Minus

                                                                          
Query: 156    cctcaatcatctcctgcgtcgcgcggccgttgtccgccggcacgaggtgcccggcgccgt 215
              |||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 158473 cctcgatcatctcctgcgccacgcggccgttgtccgccggcacgaggtgcccggcgccgt 158414

                                                                   
Query: 216    acaccaccacgtgcgtcagcgcccccgaccgctgcacgtacccggcgagctcc 268
                || |  ||||| |  ||||  || || ||||||||||||||||||||||||
Sbjct: 158413 cgacaatgacgtgggagagcgggccggagcgctgcacgtacccggcgagctcc 158361



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 87/106 (82%)
 Strand = Plus / Minus

                                                                          
Query: 281    tcgccggtccgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgc 340
              |||||| | |||||||||||||| |||||| |  |||| |||  ||||||| ||||    
Sbjct: 158360 tcgccgatgcgccacacggcgcggtcggcgacgaggaaggcggtcaggccgtcccacttg 158301

                                                            
Query: 341    agctcctgcatccacgcctcctgcgacacgacgccgtcccggaggt 386
              |||||| ||||||||||||||  |||||| |||||||||| |||||
Sbjct: 158300 agctcccgcatccacgcctccgtcgacaccacgccgtccctgaggt 158255
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>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0515G01
          Length = 175072

 Score =  105 bits (53), Expect = 1e-19
 Identities = 98/113 (86%)
 Strand = Plus / Minus

                                                                         
Query: 156   cctcaatcatctcctgcgtcgcgcggccgttgtccgccggcacgaggtgcccggcgccgt 215
             |||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 67341 cctcgatcatctcctgcgccacgcggccgttgtccgccggcacgaggtgcccggcgccgt 67282

                                                                  
Query: 216   acaccaccacgtgcgtcagcgcccccgaccgctgcacgtacccggcgagctcc 268
               || |  ||||| |  ||||  || || ||||||||||||||||||||||||
Sbjct: 67281 cgacaatgacgtgggagagcgggccggagcgctgcacgtacccggcgagctcc 67229



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 87/106 (82%)
 Strand = Plus / Minus

                                                                         
Query: 281   tcgccggtccgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgc 340
             |||||| | |||||||||||||| |||||| |  |||| |||  ||||||| ||||    
Sbjct: 67228 tcgccgatgcgccacacggcgcggtcggcgacgaggaaggcggtcaggccgtcccacttg 67169

                                                           
Query: 341   agctcctgcatccacgcctcctgcgacacgacgccgtcccggaggt 386
             |||||| ||||||||||||||  |||||| |||||||||| |||||
Sbjct: 67168 agctcccgcatccacgcctccgtcgacaccacgccgtccctgaggt 67123
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                            
Query: 163      catctcctgcgtcgcgcggccgttgtccgccggcacgaggtgcccggcgccgtacaccac 222
                ||||||||||| |||| |||||||||||||||||| |||||||||||||||||| || ||
Sbjct: 21136008 catctcctgcgccgcgtggccgttgtccgccggcaagaggtgcccggcgccgtagacgac 21136067

                                                              
Query: 223      cacgtgcgtcagcgcccccgaccgctgcacgtacccggcgagctcc 268
                 ||||| |  ||||  || || |||||||| |||||||||||||||
Sbjct: 21136068 gacgtgggagagcgggccggagcgctgcacatacccggcgagctcc 21136113



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 91/112 (81%)
 Strand = Plus / Plus

                                                                            
Query: 281      tcgccggtccgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgc 340
                |||||| | |||||||||||||  ||||||||  ||||  ||  ||||||| ||||   |
Sbjct: 21136114 tcgccgatgcgccacacggcgcagtcggcgtcgaggaagacggccaggccgtcccacttc 21136173

                                                                    
Query: 341      agctcctgcatccacgcctcctgcgacacgacgccgtcccggaggtcgcgga 392
                |||||| ||||||||||||||   ||||| |||||||||| |||||| ||||
Sbjct: 21136174 agctcccgcatccacgcctccgtggacaccacgccgtccctgaggtcacgga 21136225
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>dbj|AP003762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0456F09
          Length = 141336

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                         
Query: 163   catctcctgcgtcgcgcggccgttgtccgccggcacgaggtgcccggcgccgtacaccac 222
             ||||||||||| |||| |||||||||||||||||| |||||||||||||||||| || ||
Sbjct: 34669 catctcctgcgccgcgtggccgttgtccgccggcaagaggtgcccggcgccgtagacgac 34728

                                                           
Query: 223   cacgtgcgtcagcgcccccgaccgctgcacgtacccggcgagctcc 268
              ||||| |  ||||  || || |||||||| |||||||||||||||
Sbjct: 34729 gacgtgggagagcgggccggagcgctgcacatacccggcgagctcc 34774



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 91/112 (81%)
 Strand = Plus / Plus

                                                                         
Query: 281   tcgccggtccgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgc 340
             |||||| | |||||||||||||  ||||||||  ||||  ||  ||||||| ||||   |
Sbjct: 34775 tcgccgatgcgccacacggcgcagtcggcgtcgaggaagacggccaggccgtcccacttc 34834

                                                                 
Query: 341   agctcctgcatccacgcctcctgcgacacgacgccgtcccggaggtcgcgga 392
             |||||| ||||||||||||||   ||||| |||||||||| |||||| ||||
Sbjct: 34835 agctcccgcatccacgcctccgtggacaccacgccgtccctgaggtcacgga 34886
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>dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0528E12
          Length = 139750

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                          
Query: 163    catctcctgcgtcgcgcggccgttgtccgccggcacgaggtgcccggcgccgtacaccac 222
              ||||||||||| |||| |||||||||||||||||| |||||||||||||||||| || ||
Sbjct: 133009 catctcctgcgccgcgtggccgttgtccgccggcaagaggtgcccggcgccgtagacgac 133068

                                                            
Query: 223    cacgtgcgtcagcgcccccgaccgctgcacgtacccggcgagctcc 268
               ||||| |  ||||  || || |||||||| |||||||||||||||
Sbjct: 133069 gacgtgggagagcgggccggagcgctgcacatacccggcgagctcc 133114



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 91/112 (81%)
 Strand = Plus / Plus

                                                                          
Query: 281    tcgccggtccgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgc 340
              |||||| | |||||||||||||  ||||||||  ||||  ||  ||||||| ||||   |
Sbjct: 133115 tcgccgatgcgccacacggcgcagtcggcgtcgaggaagacggccaggccgtcccacttc 133174

                                                                  
Query: 341    agctcctgcatccacgcctcctgcgacacgacgccgtcccggaggtcgcgga 392
              |||||| ||||||||||||||   ||||| |||||||||| |||||| ||||
Sbjct: 133175 agctcccgcatccacgcctccgtggacaccacgccgtccctgaggtcacgga 133226
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>ref|XM_463401.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1359

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 233  agcgcccccgaccgctgcacgtacccggcgagct 266
            ||||||||||||| ||||||||||||||||||||
Sbjct: 1217 agcgcccccgacctctgcacgtacccggcgagct 1184



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 289  ccgccacacggcgcgctcggcgtcctggaacgcgcgcaggcc 330
            |||||||||||||||||| ||| |  ||||||||| ||||||
Sbjct: 1170 ccgccacacggcgcgctccgcggcgaggaacgcgcccaggcc 1129
to top
>dbj|AP003220.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OSJNBb0035I14
          Length = 117919

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 233  agcgcccccgaccgctgcacgtacccggcgagct 266
            ||||||||||||| ||||||||||||||||||||
Sbjct: 7877 agcgcccccgacctctgcacgtacccggcgagct 7844



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 289  ccgccacacggcgcgctcggcgtcctggaacgcgcgcaggcc 330
            |||||||||||||||||| ||| |  ||||||||| ||||||
Sbjct: 7830 ccgccacacggcgcgctccgcggcgaggaacgcgcccaggcc 7789
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>dbj|AP002839.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0688A04
          Length = 143969

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                
Query: 233    agcgcccccgaccgctgcacgtacccggcgagct 266
              ||||||||||||| ||||||||||||||||||||
Sbjct: 141476 agcgcccccgacctctgcacgtacccggcgagct 141443



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                        
Query: 289    ccgccacacggcgcgctcggcgtcctggaacgcgcgcaggcc 330
              |||||||||||||||||| ||| |  ||||||||| ||||||
Sbjct: 141429 ccgccacacggcgcgctccgcggcgaggaacgcgcccaggcc 141388
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>dbj|AK071156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078D08, full
            insert sequence
          Length = 1451

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 233  agcgcccccgaccgctgcacgtacccggcgagct 266
            ||||||||||||| ||||||||||||||||||||
Sbjct: 1259 agcgcccccgacctctgcacgtacccggcgagct 1226



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 289  ccgccacacggcgcgctcggcgtcctggaacgcgcgcaggcc 330
            |||||||||||||||||| ||| |  ||||||||| ||||||
Sbjct: 1212 ccgccacacggcgcgctccgcggcgaggaacgcgcccaggcc 1171
to top
>ref|XM_475951.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1341

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 290  cgccacacggcgcgctcggcgtcctggaacgcg 322
            |||||||||||||| ||||||||||||||||||
Sbjct: 1166 cgccacacggcgcggtcggcgtcctggaacgcg 1134
to top
>dbj|AK070825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064P05, full
            insert sequence
          Length = 1575

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 290  cgccacacggcgcgctcggcgtcctggaacgcg 322
            |||||||||||||| ||||||||||||||||||
Sbjct: 1289 cgccacacggcgcggtcggcgtcctggaacgcg 1257
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>ref|XM_475952.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1356

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                        
Query: 290  cgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgcagctcctgc 349
            ||||||||||||||  |||||||||||||||||   |||||| ||||   ||||||| ||
Sbjct: 1190 cgccacacggcgcggccggcgtcctggaacgcggcgaggccgtcccactccagctcccgc 1131

                        
Query: 350  atccacgcctcc 361
            | ||||||||||
Sbjct: 1130 agccacgcctcc 1119



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 245  cgctgcacgtacccggcgagc 265
            |||||||||||||||||||||
Sbjct: 1223 cgctgcacgtacccggcgagc 1203
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>dbj|AK109766.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-H10, full
            insert sequence
          Length = 1832

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                        
Query: 290  cgccacacggcgcgctcggcgtcctggaacgcgcgcaggccgccccagcgcagctcctgc 349
            ||||||||||||||  |||||||||||||||||   |||||| ||||   ||||||| ||
Sbjct: 1237 cgccacacggcgcggccggcgtcctggaacgcggcgaggccgtcccactccagctcccgc 1178

                        
Query: 350  atccacgcctcc 361
            | ||||||||||
Sbjct: 1177 agccacgcctcc 1166



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 245  cgctgcacgtacccggcgagc 265
            |||||||||||||||||||||
Sbjct: 1270 cgctgcacgtacccggcgagc 1250
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>emb|BX901895.15| Zebrafish DNA sequence from clone CH211-218C11 in linkage group 7,
              complete sequence
          Length = 208436

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 7      aataaaaagcattattattat 27
              |||||||||||||||||||||
Sbjct: 151439 aataaaaagcattattattat 151459
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>emb|CR361563.10| Zebrafish DNA sequence from clone CH211-254L20 in linkage group 25,
              complete sequence
          Length = 150089

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 7      aataaaaagcattattattat 27
              |||||||||||||||||||||
Sbjct: 130177 aataaaaagcattattattat 130197
to top
>emb|AL591391.5| Zebrafish DNA sequence from clone BUSM1-186F8 in linkage group 7
            Contains the nitr1a_3 gene for novel immune-type receptor
            1a, allele 3, the nitr1c_3 gene for novel immune-type
            receptor 1c, allele 3, the nitr2e_1 gene for novel
            immune-type receptor 2e, allele 1, the nitr1b_2 gene for
            novel immune-ype receptor 1b, allele 2, the nitr2a_3 gene
            for novel immune-type receptor 2a, allele 3, the nitr2b_1
            gene for novel immune-type receptor 2b, allele 1, the
            nitr1f_1 gene for novel immune-type receptor 1f, allele
            1, a novel immune-type receptor 2c pseudogene, the
            nitr3d_3 gene for novel immune-type receptor 3d, allele
            3, the nitr1h_1 gene for novel immune-type receptor 1h,
            allele 1, the nitr1d_5 gene for novel immune-type
            receptor 1d, allele 5 and two novel immune-type receptor
            1 pseudogenes, complete sequence
          Length = 97640

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 7    aataaaaagcattattattat 27
            |||||||||||||||||||||
Sbjct: 1823 aataaaaagcattattattat 1843
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>emb|AL591406.6| Zebrafish DNA sequence from clone BUSM1-213M14 in linkage group 7,
             complete sequence
          Length = 65872

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 7     aataaaaagcattattattat 27
             |||||||||||||||||||||
Sbjct: 65695 aataaaaagcattattattat 65715
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 369     cgacgccgtcccggaggtcgc 389
               |||||||||||||||||||||
Sbjct: 3164801 cgacgccgtcccggaggtcgc 3164781
to top
>emb|AL591418.11| Zebrafish DNA sequence from clone BUSM1-139E19 in linkage group 7,
            complete sequence
          Length = 112025

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 7    aataaaaagcattattattat 27
            |||||||||||||||||||||
Sbjct: 2146 aataaaaagcattattattat 2166
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>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 5       acaataaaaagcattattat 24
               ||||||||||||||||||||
Sbjct: 1975389 acaataaaaagcattattat 1975408
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>gb|AC117723.8| Mus musculus chromosome 1, clone RP24-232C21, complete sequence
          Length = 213190

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      agtacaataaaaagcattat 21
              ||||||||||||||||||||
Sbjct: 132915 agtacaataaaaagcattat 132896
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 136     gcccgtctgcataacccagc 155
               ||||||||||||||||||||
Sbjct: 3281608 gcccgtctgcataacccagc 3281627
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>gb|AC127696.4| Mus musculus BAC clone RP23-459J11 from chromosome 7, complete sequence
          Length = 168580

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 4      tacaataaaaagcattattattat 27
              ||||||||||| ||||||||||||
Sbjct: 162294 tacaataaaaaacattattattat 162317
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>gb|AC118487.4| Rattus norvegicus 2 BAC CH230-285C2 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 177865

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   cagcgcagctcctgcatcca 354
             ||||||||||||||||||||
Sbjct: 68970 cagcgcagctcctgcatcca 68951
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>emb|BX572083.6| Zebrafish DNA sequence from clone DKEY-232J4 in linkage group 13,
             complete sequence
          Length = 99030

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     aataaaaagcattattatta 26
             ||||||||||||||||||||
Sbjct: 83036 aataaaaagcattattatta 83055
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>gb|AY950802.1| Bacteriophage SH1, complete genome
          Length = 30889

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    cgtcgccgccgcctccgttc 86
             ||||||||||||||||||||
Sbjct: 17358 cgtcgccgccgcctccgttc 17339
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>gb|AC011511.12| Homo sapiens chromosome 19 clone CTD-2369P2, complete sequence
          Length = 156503

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 6     caataaaaagcattattattatgttttt 33
             ||||||| |||||||||||||| |||||
Sbjct: 64735 caataaatagcattattattattttttt 64708
to top
>emb|BX537141.17| Zebrafish DNA sequence from clone DKEY-9E8 in linkage group 2, complete
             sequence
          Length = 264534

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 4     tacaataaaaagcattattattat 27
             |||||||||||| |||||||||||
Sbjct: 63580 tacaataaaaagtattattattat 63557
to top
>gb|AC023395.8| Homo sapiens chromosome 18, clone RP11-484N16, complete sequence
          Length = 160084

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     aataaaaagcattattatta 26
             ||||||||||||||||||||
Sbjct: 33511 aataaaaagcattattatta 33492
to top
>gb|AC021701.8| Homo sapiens chromosome 18, clone RP11-704G7, complete sequence
          Length = 170311

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      aataaaaagcattattatta 26
              ||||||||||||||||||||
Sbjct: 141507 aataaaaagcattattatta 141488
to top
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
              complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    cgcgcgcaggccgccccagc 338
              ||||||||||||||||||||
Sbjct: 125224 cgcgcgcaggccgccccagc 125205
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 255     acccggcgagctccctcccctccccttc 282
               ||||||| ||| ||||||||||||||||
Sbjct: 1546974 acccggccagccccctcccctccccttc 1546947
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 256      cccggcgagctccctcccctcccc 279
                |||||||||| |||||||||||||
Sbjct: 13609923 cccggcgagccccctcccctcccc 13609900
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 73      cgccgcctccgttcggtggt 92
               ||||||||||||||||||||
Sbjct: 7405471 cgccgcctccgttcggtggt 7405452
to top
>gb|AE004557.1| Pseudomonas aeruginosa PAO1, section 118 of 529 of the complete
            genome
          Length = 12561

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 312  cctggaacgcgcgcaggccgccccagcgcagc 343
            |||||| | ||||||||||| |||||||||||
Sbjct: 8004 cctggacctcgcgcaggccggcccagcgcagc 7973
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 297     cggcgcgctcggcgtcctgg 316
               ||||||||||||||||||||
Sbjct: 2382994 cggcgcgctcggcgtcctgg 2383013
to top
>gb|AC008572.6|AC008572 Homo sapiens chromosome 5 clone CTC-551A13, complete sequence
          Length = 170529

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    attattatgtttttcgtcac 39
             ||||||||||||||||||||
Sbjct: 48389 attattatgtttttcgtcac 48370
to top
>dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1339H09
          Length = 131136

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 256   cccggcgagctccctcccctcccc 279
             |||||||||| |||||||||||||
Sbjct: 47339 cccggcgagccccctcccctcccc 47316
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>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:B1040D06
          Length = 155034

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 256  cccggcgagctccctcccctcccc 279
            |||||||||| |||||||||||||
Sbjct: 8037 cccggcgagccccctcccctcccc 8014
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>dbj|AP003877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_E09
          Length = 100932

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    cgccgcctccgttcggtggt 92
             ||||||||||||||||||||
Sbjct: 15511 cgccgcctccgttcggtggt 15492
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>ref|XM_320009.2| Anopheles gambiae str. PEST ENSANGP00000010585 (ENSANGG00000008096),
            partial mRNA
          Length = 2400

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 160  aatcatctcctgcgtcgcgcggcc 183
            |||||||||||||||||| |||||
Sbjct: 1458 aatcatctcctgcgtcgcacggcc 1435
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>ref|NM_210740.1| Eremothecium gossypii AFL164Cp (AFL164C), mRNA
          Length = 585

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 319 cgcgcgcaggccgccccagc 338
           ||||||||||||||||||||
Sbjct: 109 cgcgcgcaggccgccccagc 128
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>gb|AC102304.6| Mus musculus chromosome 7, clone RP24-403P14, complete sequence
          Length = 153206

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 4      tacaataaaaagcattattattat 27
              ||||||||||| ||||||||||||
Sbjct: 125034 tacaataaaaaacattattattat 125011
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 255     acccggcgagctccctcccctccccttc 282
               ||||||| ||| ||||||||||||||||
Sbjct: 1546974 acccggccagccccctcccctccccttc 1546947
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>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 183385

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 255   acccggcgagctccctcccctccccttc 282
             ||||||| ||| ||||||||||||||||
Sbjct: 78758 acccggccagccccctcccctccccttc 78785
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>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome
          Length = 2056416

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 121     gccgctgccaaagaggcccgtctg 144
               ||||||||||||||||| ||||||
Sbjct: 1852821 gccgctgccaaagaggcgcgtctg 1852798


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,360,714
Number of Sequences: 3902068
Number of extensions: 4360714
Number of successful extensions: 150702
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 149678
Number of HSP's gapped (non-prelim): 1008
length of query: 392
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 370
effective length of database: 17,147,199,772
effective search space: 6344463915640
effective search space used: 6344463915640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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