ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast27d11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MGLL_MOUSE (O35678) Monoglyceride lipase (EC 3.1.1.23) (MGL) 29 2.6
2PMPC_CHLMU (Q9PJY1) Probable outer membrane protein pmpC precurs... 28 4.4
3MGLL_RAT (Q8R431) Monoglyceride lipase (EC 3.1.1.23) (MGL) 28 7.5
4PCSK5_MOUSE (Q04592) Proprotein convertase subtilisin/kexin type... 27 9.8

>MGLL_MOUSE (O35678) Monoglyceride lipase (EC 3.1.1.23) (MGL)|
          Length = 303

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +2

Query: 137 TPGRIDSSLLVKNYSHKGTHIYGDKSFYPSSPLLKKC--KVCFGL 265
           T GRIDSS+L +N S        +   Y S PL+ +   KVCFG+
Sbjct: 175 TLGRIDSSVLSRNKS--------EVDLYNSDPLVCRAGLKVCFGI 211



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>PMPC_CHLMU (Q9PJY1) Probable outer membrane protein pmpC precursor (Polymorphic|
            membrane protein C)
          Length = 1460

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 14/61 (22%)
 Frame = +2

Query: 131  AKTPGRIDSSLLVKNYSHKGTH------IYGDKSFY--------PSSPLLKKCKVCFGLC 268
            +K  GR  S  L +NY+HKG+       +YG   FY         S PLL +  + +G  
Sbjct: 1220 SKMIGRSKSLKLERNYTHKGSEYSYQASVYGGSPFYLTINKEAGRSLPLLLQGVISYGYI 1279

Query: 269  K 271
            K
Sbjct: 1280 K 1280



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>MGLL_RAT (Q8R431) Monoglyceride lipase (EC 3.1.1.23) (MGL)|
          Length = 303

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +2

Query: 143 GRIDSSLLVKNYSHKGTHIYGDKSFYPSSPLL--KKCKVCFGL 265
           GRIDSS+L +N S        +   Y S PL+     KVCFG+
Sbjct: 177 GRIDSSVLSRNKS--------EVDLYNSDPLICHAGVKVCFGI 211



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>PCSK5_MOUSE (Q04592) Proprotein convertase subtilisin/kexin type 5 precursor (EC|
            3.4.21.-) (Proprotein convertase PC5)
            (Subtilisin/kexin-like protease PC5) (PC6)
            (Subtilisin-like proprotein convertase 6) (SPC6)
          Length = 1877

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = +2

Query: 224  SSPLLKKCKVCFG-LCKVCPTGEGTYAAANFISC 322
            + P    CK C G LC  CPTG   +  A   SC
Sbjct: 1209 NQPCHSSCKTCNGSLCASCPTGMYLWLQACVPSC 1242


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,658,330
Number of Sequences: 219361
Number of extensions: 976659
Number of successful extensions: 2300
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2300
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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