ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast27b09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470547.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1788 Score = 170 bits (86), Expect = 2e-39 Identities = 122/134 (91%) Strand = Plus / Minus Query: 283 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 342 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 1784 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 1725 Query: 343 cgcacgcgtccgacggcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcg 402 |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1724 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 1665 Query: 403 agctgccacacgcg 416 |||||||||||||| Sbjct: 1664 agctgccacacgcg 1651
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 170 bits (86), Expect = 2e-39 Identities = 122/134 (91%) Strand = Plus / Minus Query: 283 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 342 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 4253220 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 4253161 Query: 343 cgcacgcgtccgacggcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcg 402 |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4253160 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 4253101 Query: 403 agctgccacacgcg 416 |||||||||||||| Sbjct: 4253100 agctgccacacgcg 4253087 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 370 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||||| ||||||||| ||| |||||||||||| Sbjct: 7656831 gcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcg 7656877 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacac 413 |||||||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 3388426 ggcgctgttgcacttgaatccggagccgaacgcgatctgccacac 3388382 Score = 48.1 bits (24), Expect = 0.023 Identities = 42/48 (87%) Strand = Plus / Plus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||| ||| ||||||| ||| |||||| ||||| Sbjct: 6271480 ggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcg 6271527
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 170 bits (86), Expect = 2e-39 Identities = 122/134 (91%) Strand = Plus / Minus Query: 283 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 342 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 4253335 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 4253276 Query: 343 cgcacgcgtccgacggcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcg 402 |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4253275 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 4253216 Query: 403 agctgccacacgcg 416 |||||||||||||| Sbjct: 4253215 agctgccacacgcg 4253202 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 370 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||||| ||||||||| ||| |||||||||||| Sbjct: 7654666 gcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcg 7654712 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacac 413 |||||||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 3388537 ggcgctgttgcacttgaatccggagccgaacgcgatctgccacac 3388493 Score = 48.1 bits (24), Expect = 0.023 Identities = 42/48 (87%) Strand = Plus / Plus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||| ||| ||||||| ||| |||||| ||||| Sbjct: 6270693 ggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcg 6270740
>dbj|AK119228.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A08, full insert sequence Length = 1912 Score = 170 bits (86), Expect = 2e-39 Identities = 122/134 (91%) Strand = Plus / Minus Query: 283 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 342 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 1679 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 1620 Query: 343 cgcacgcgtccgacggcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcg 402 |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1619 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 1560 Query: 403 agctgccacacgcg 416 |||||||||||||| Sbjct: 1559 agctgccacacgcg 1546
>dbj|AK100798.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F20, full insert sequence Length = 662 Score = 170 bits (86), Expect = 2e-39 Identities = 122/134 (91%) Strand = Plus / Minus Query: 283 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 342 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 429 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 370 Query: 343 cgcacgcgtccgacggcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcg 402 |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 369 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 310 Query: 403 agctgccacacgcg 416 |||||||||||||| Sbjct: 309 agctgccacacgcg 296
>dbj|AK099232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M20, full insert sequence Length = 1903 Score = 170 bits (86), Expect = 2e-39 Identities = 122/134 (91%) Strand = Plus / Minus Query: 283 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 342 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 1670 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 1611 Query: 343 cgcacgcgtccgacggcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcg 402 |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1610 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 1551 Query: 403 agctgccacacgcg 416 |||||||||||||| Sbjct: 1550 agctgccacacgcg 1537
>dbj|AK061335.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B10, full insert sequence Length = 1909 Score = 170 bits (86), Expect = 2e-39 Identities = 122/134 (91%) Strand = Plus / Minus Query: 283 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 342 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 1679 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 1620 Query: 343 cgcacgcgtccgacggcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcg 402 |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1619 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 1560 Query: 403 agctgccacacgcg 416 |||||||||||||| Sbjct: 1559 agctgccacacgcg 1546
>dbj|AK060840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D04, full insert sequence Length = 1907 Score = 170 bits (86), Expect = 2e-39 Identities = 122/134 (91%) Strand = Plus / Minus Query: 283 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 342 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 1674 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 1615 Query: 343 cgcacgcgtccgacggcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcg 402 |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1614 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 1555 Query: 403 agctgccacacgcg 416 |||||||||||||| Sbjct: 1554 agctgccacacgcg 1541
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 170 bits (86), Expect = 2e-39 Identities = 122/134 (91%) Strand = Plus / Minus Query: 283 gcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggcgg 342 |||| |||||| ||||||||||| |||| |||||||||||| ||||| | | ||||||| Sbjct: 81835 gcgttcatgcgagccgggtactgctcgacgcagtccagccacgggctgcgcgccgggcgg 81776 Query: 343 cgcacgcgtccgacggcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcg 402 |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 81775 cgcacgcggcggacggcgcgccacacggcgctgttgcacttgaacccggagccgaaggcg 81716 Query: 403 agctgccacacgcg 416 |||||||||||||| Sbjct: 81715 agctgccacacgcg 81702
>gb|AY108343.1| Zea mays PCO065510 mRNA sequence Length = 1496 Score = 167 bits (84), Expect = 4e-38 Identities = 123/136 (90%) Strand = Plus / Plus Query: 281 aggcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctcctggacgggc 340 ||||||||||||||||||||||||||||||||||||||||||||||||| | | |||| Sbjct: 369 aggcgtccatgcgcgccgggtactggtcgatgcagtccagccaggggctgcgcgcggggc 428 Query: 341 ggcgcacgcgtccgacggcgcgccacaaggcgctgttgcacttgaacccggagccgaagg 400 |||||||||| | |||||||||||||| ||||||||||||||||| || || ||||||| Sbjct: 429 ggcgcacgcggcggacggcgcgccacaccgcgctgttgcacttgaagcccgacccgaagg 488 Query: 401 cgagctgccacacgcg 416 |||||||||| ||||| Sbjct: 489 cgagctgccagacgcg 504
>ref|NM_196495.1| Oryza sativa (japonica cultivar-group) putative beta-ketoacyl-CoA synthase (OSJNBa0032I20.8), mRNA Length = 1572 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 363 ccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccacac 413 ||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1437 ccacacggcgctgttgcacttgaacccggagccgaaggcgatctgccacac 1387
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 363 ccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccacac 413 ||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 14046782 ccacacggcgctgttgcacttgaacccggagccgaaggcgatctgccacac 14046832 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 358 gcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||| | |||||||||||||||||| |||||||||||| ||| |||||| ||||| Sbjct: 3638999 gcgcgccagacggcgctgttgcacttgaagccggagccgaagccgatctgccagacgcg 3639057 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 358 gcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgcca 410 |||||||| | |||||||||||||||||| || ||||||||| ||| |||||| Sbjct: 11266867 gcgcgccagacggcgctgttgcacttgaagcctgagccgaagccgatctgcca 11266919 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 372 gctgttgcacttgaacccggagccgaaggcgagc 405 ||||||||||||||| |||| |||||||| |||| Sbjct: 17055863 gctgttgcacttgaagccggcgccgaaggtgagc 17055830
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 363 ccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccacac 413 ||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 62911 ccacacggcgctgttgcacttgaacccggagccgaaggcgatctgccacac 62961
>dbj|AK073016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149L14, full insert sequence Length = 1040 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 363 ccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccacac 413 ||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 709 ccacacggcgctgttgcacttgaacccggagccgaaggcgatctgccacac 659
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 363 ccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccacac 413 ||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 14055024 ccacacggcgctgttgcacttgaacccggagccgaaggcgatctgccacac 14055074 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 358 gcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||| | |||||||||||||||||| |||||||||||| ||| |||||| ||||| Sbjct: 3638920 gcgcgccagacggcgctgttgcacttgaagccggagccgaagccgatctgccagacgcg 3638978 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 358 gcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgcca 410 |||||||| | |||||||||||||||||| || ||||||||| ||| |||||| Sbjct: 11273307 gcgcgccagacggcgctgttgcacttgaagcctgagccgaagccgatctgcca 11273359 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 372 gctgttgcacttgaacccggagccgaaggcgagc 405 ||||||||||||||| |||| |||||||| |||| Sbjct: 17064903 gctgttgcacttgaagccggcgccgaaggtgagc 17064870
>ref|XM_475915.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1563 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 363 ccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccac 411 ||||| |||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 1455 ccacacggcgctgttgcacttgaagccggagccgaaggcgatctgccac 1407
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 363 ccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccac 411 ||||| |||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 40141 ccacacggcgctgttgcacttgaagccggagccgaaggcgatctgccac 40189
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 363 ccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccac 411 ||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 138186 ccacacggcgctgttgcacttgaacccggagccgaacgcgatctgccac 138234
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 363 ccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccac 411 ||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 21614667 ccacacggcgctgttgcacttgaacccggagccgaacgcgatctgccac 21614715 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccg 390 |||||||||||||||||||||| Sbjct: 23418013 ggcgctgttgcacttgaacccg 23417992
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 363 ccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccac 411 ||||| |||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 28405217 ccacacggcgctgttgcacttgaagccggagccgaaggcgatctgccac 28405265 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgcca 410 |||||||||||||||||||||| |||||| |||| |||||| Sbjct: 28059217 ggcgctgttgcacttgaacccgctgccgaacgcgatctgcca 28059258 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 373 ctgttgcacttgaacccggagccgaaggcgagctgcca 410 |||||||||||||| || ||||||||| ||| |||||| Sbjct: 22008150 ctgttgcacttgaagcctgagccgaagccgatctgcca 22008187
>dbj|AK120567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134A09, full insert sequence Length = 1536 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 363 ccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccac 411 ||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 1182 ccacacggcgctgttgcacttgaacccggagccgaacgcgatctgccac 1134
>dbj|AK070754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067B12, full insert sequence Length = 2233 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 363 ccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccac 411 ||||| |||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 1914 ccacacggcgctgttgcacttgaagccggagccgaaggcgatctgccac 1866
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 363 ccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccac 411 ||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 21924866 ccacacggcgctgttgcacttgaacccggagccgaacgcgatctgccac 21924914 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccg 390 |||||||||||||||||||||| Sbjct: 23727923 ggcgctgttgcacttgaacccg 23727902
>gb|AY108989.1| Zea mays PCO108745 mRNA sequence Length = 625 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||| |||||||||||||||| |||||| ||||| Sbjct: 406 ggcgctgttgcacttgaagccggagccgaaggcgatctgccagacgcg 453
>ref|NM_194947.1| Oryza sativa (japonica cultivar-group) putative senescence-associated protein 15 (OSJNBa0036D19.6), mRNA Length = 1797 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 358 gcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||| | |||||||||||||||||| |||||||||||| ||| |||||| ||||| Sbjct: 1481 gcgcgccagacggcgctgttgcacttgaagccggagccgaagccgatctgccagacgcg 1423
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 370 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||||| ||||||||| ||| |||||||||||| Sbjct: 58459 gcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcg 58413
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence Length = 144359 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 358 gcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||| | |||||||||||||||||| |||||||||||| ||| |||||| ||||| Sbjct: 71840 gcgcgccagacggcgctgttgcacttgaagccggagccgaagccgatctgccagacgcg 71898
>dbj|AK119222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E03, full insert sequence Length = 2098 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 370 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||||| ||||||||| ||| |||||||||||| Sbjct: 1609 gcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcg 1563
>dbj|AK112059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A11, full insert sequence Length = 2025 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 370 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||||| ||||||||| ||| |||||||||||| Sbjct: 1609 gcgctgttgcacttgaaccccgagccgaagccgatctgccacacgcg 1563
>gb|AY105739.1| Zea mays PCO084555 mRNA sequence Length = 962 Score = 69.9 bits (35), Expect = 6e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 362 gccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||| |||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 409 gccacacggcgctgttgcacttgaacccgctgccgaaggcgatctgccagacgcg 355
>ref|NM_187760.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1575 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacac 413 |||||||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 1392 ggcgctgttgcacttgaatccggagccgaacgcgatctgccacac 1348
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 354 gacggcgcgccacaaggcgctgttgcacttgaacccg 390 |||||||||||||| |||||||||||||||||||||| Sbjct: 124976 gacggcgcgccacacggcgctgttgcacttgaacccg 125012
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacac 413 |||||||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 40788 ggcgctgttgcacttgaatccggagccgaacgcgatctgccacac 40832
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence Length = 133967 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 354 gacggcgcgccacaaggcgctgttgcacttgaacccg 390 |||||||||||||| |||||||||||||||||||||| Sbjct: 41534 gacggcgcgccacacggcgctgttgcacttgaacccg 41570
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 354 gacggcgcgccacaaggcgctgttgcacttgaacccg 390 |||||||||||||| |||||||||||||||||||||| Sbjct: 27390380 gacggcgcgccacacggcgctgttgcacttgaacccg 27390416
>dbj|AK064127.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E01, full insert sequence Length = 1408 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacac 413 |||||||||||||||||| ||||||||||| |||| ||||||||| Sbjct: 960 ggcgctgttgcacttgaatccggagccgaacgcgatctgccacac 916
>ref|XM_464563.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1929 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 370 gcgctgttgcacttgaacccggagccgaaggcgagctgccacac 413 ||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 1550 gcgctgttgcacttgaacccggacccgaacgcgatctgccacac 1507
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 370 gcgctgttgcacttgaacccggagccgaaggcgagctgccacac 413 ||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 5930677 gcgctgttgcacttgaacccggacccgaacgcgatctgccacac 5930720 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||| |||||||||||| ||| | ||||||||| Sbjct: 30520191 ggcgctgttgcacttgaagccggagccgaagccgatcatccacacgcg 30520144 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 372 gctgttgcacttgaacccggagccgaagg 400 |||||||||||||||||| || ||||||| Sbjct: 34873577 gctgttgcacttgaaccccgacccgaagg 34873549
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056C19 Length = 147739 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 370 gcgctgttgcacttgaacccggagccgaaggcgagctgccacac 413 ||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 108898 gcgctgttgcacttgaacccggacccgaacgcgatctgccacac 108941
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544H11 Length = 178376 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 370 gcgctgttgcacttgaacccggagccgaaggcgagctgccacac 413 ||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 160479 gcgctgttgcacttgaacccggacccgaacgcgatctgccacac 160522
>dbj|AK067907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127I02, full insert sequence Length = 1929 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 370 gcgctgttgcacttgaacccggagccgaaggcgagctgccacac 413 ||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 1550 gcgctgttgcacttgaacccggacccgaacgcgatctgccacac 1507
>ref|NM_189710.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1350 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 356 cggcgcgccacaaggcgctgttgcacttgaacccg 390 |||||||||||| |||||||||||||||||||||| Sbjct: 657 cggcgcgccacacggcgctgttgcacttgaacccg 691
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 358 gcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||| |||||||||||||||||||| || || ||||||| ||| |||||||| Sbjct: 5414 gcgcgccacacagcgctgttgcacttgaaccctgacccaaaggcgatctggcacacgcg 5356
>gb|AF527808.1| Sorghum bicolor clone BAC SBTXS_0040L6 php200725 orthologous region Length = 90923 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 358 gcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||| |||||||||||||||||||| || || ||||||| ||| |||||||| Sbjct: 10233 gcgcgccacacagcgctgttgcacttgaaccctgacccaaaggcgatctggcacacgcg 10291
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 356 cggcgcgccacaaggcgctgttgcacttgaacccg 390 |||||||||||| |||||||||||||||||||||| Sbjct: 41345815 cggcgcgccacacggcgctgttgcacttgaacccg 41345849 Score = 46.1 bits (23), Expect = 0.090 Identities = 50/59 (84%) Strand = Plus / Minus Query: 358 gcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||| | || ||||||||||||||| || ||||||||| || |||||| ||||| Sbjct: 19951176 gcgcgccagacggtgctgttgcacttgaagcctgagccgaagctgatctgccagacgcg 19951118
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 356 cggcgcgccacaaggcgctgttgcacttgaacccg 390 |||||||||||| |||||||||||||||||||||| Sbjct: 37308 cggcgcgccacacggcgctgttgcacttgaacccg 37342
>gb|AY110123.1| Zea mays CL29782_1 mRNA sequence Length = 932 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgcca 410 |||||||||||||||||| ||||||||||| |||| |||||| Sbjct: 266 ggcgctgttgcacttgaagccggagccgaaagcgatctgcca 307
>ref|NM_196127.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OJ1341F06.20), mRNA Length = 609 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 358 gcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgcca 410 |||||||| | |||||||||||||||||| || ||||||||| ||| |||||| Sbjct: 52 gcgcgccagacggcgctgttgcacttgaagcctgagccgaagccgatctgcca 104
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02, complete sequence Length = 131922 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 358 gcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgcca 410 |||||||| | |||||||||||||||||| || ||||||||| ||| |||||| Sbjct: 74855 gcgcgccagacggcgctgttgcacttgaagcctgagccgaagccgatctgcca 74907
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1341F06, from chromosome 10, complete sequence Length = 102520 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 358 gcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgcca 410 |||||||| | |||||||||||||||||| || ||||||||| ||| |||||| Sbjct: 99588 gcgcgccagacggcgctgttgcacttgaagcctgagccgaagccgatctgcca 99536
>ref|XM_467628.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1458 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||| |||||||||||| ||| | ||||||||| Sbjct: 1359 ggcgctgttgcacttgaagccggagccgaagccgatcatccacacgcg 1312
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||| |||||||||||| ||| | ||||||||| Sbjct: 32199 ggcgctgttgcacttgaagccggagccgaagccgatcatccacacgcg 32152
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0617A09 Length = 134804 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||| |||||||||||| ||| | ||||||||| Sbjct: 126239 ggcgctgttgcacttgaagccggagccgaagccgatcatccacacgcg 126192
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 370 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 ||||||||||||||||| |||||||||||| ||| | ||||||||| Sbjct: 8609262 gcgctgttgcacttgaaaccggagccgaagccgatcatccacacgcg 8609308 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 370 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 ||||||||||||||||| |||||||||||| ||| | ||||||||| Sbjct: 8523506 gcgctgttgcacttgaaaccggagccgaagccgatcatccacacgcg 8523460 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 369 ggcgctgttgcacttgaacccggagccgaa 398 |||||||||||||||||| ||||||||||| Sbjct: 8419686 ggcgctgttgcacttgaagccggagccgaa 8419715 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 gcgctgttgcacttgaacccggagccgaag 399 |||||||||||||||||||| || |||||| Sbjct: 8656214 gcgctgttgcacttgaaccccgacccgaag 8656243
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0037N01 Length = 174085 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 370 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 ||||||||||||||||| |||||||||||| ||| | ||||||||| Sbjct: 24244 gcgctgttgcacttgaaaccggagccgaagccgatcatccacacgcg 24290 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 gcgctgttgcacttgaacccggagccgaag 399 |||||||||||||||||||| || |||||| Sbjct: 71196 gcgctgttgcacttgaaccccgacccgaag 71225
>dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0092H22 Length = 165194 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 370 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 ||||||||||||||||| |||||||||||| ||| | ||||||||| Sbjct: 138207 gcgctgttgcacttgaaaccggagccgaagccgatcatccacacgcg 138161 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 369 ggcgctgttgcacttgaacccggagccgaa 398 |||||||||||||||||| ||||||||||| Sbjct: 34387 ggcgctgttgcacttgaagccggagccgaa 34416
>dbj|AP004630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0031A09 Length = 162511 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 370 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 ||||||||||||||||| |||||||||||| ||| | ||||||||| Sbjct: 84081 gcgctgttgcacttgaaaccggagccgaagccgatcatccacacgcg 84127 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 gcgctgttgcacttgaacccggagccgaag 399 |||||||||||||||||||| || |||||| Sbjct: 131033 gcgctgttgcacttgaaccccgacccgaag 131062
>dbj|AK068185.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135C17, full insert sequence Length = 1669 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 370 gcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 ||||||||||||||||| |||||||||||| ||| | ||||||||| Sbjct: 1469 gcgctgttgcacttgaaaccggagccgaagccgatcatccacacgcg 1423
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgcca 410 |||||||||||||||||||||| |||||| |||| |||||| Sbjct: 139382 ggcgctgttgcacttgaacccgctgccgaacgcgatctgcca 139423
>dbj|AK119596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D11, full insert sequence Length = 2378 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgcca 410 |||||||||||||||||||||| |||||| |||| |||||| Sbjct: 1693 ggcgctgttgcacttgaacccgctgccgaacgcgatctgcca 1652
>dbj|AK101103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025C07, full insert sequence Length = 2356 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgcca 410 |||||||||||||||||||||| |||||| |||| |||||| Sbjct: 1694 ggcgctgttgcacttgaacccgctgccgaacgcgatctgcca 1653
>gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0090D11, complete sequence Length = 115403 Score = 48.1 bits (24), Expect = 0.023 Identities = 42/48 (87%) Strand = Plus / Plus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||| ||| ||||||| ||| |||||| ||||| Sbjct: 110091 ggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcg 110138
>gb|AC104474.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024O21, complete sequence Length = 155651 Score = 48.1 bits (24), Expect = 0.023 Identities = 42/48 (87%) Strand = Plus / Plus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||| ||| ||||||| ||| |||||| ||||| Sbjct: 84688 ggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcg 84735
>dbj|AK106150.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-H08, full insert sequence Length = 1892 Score = 48.1 bits (24), Expect = 0.023 Identities = 42/48 (87%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||| ||| ||||||| ||| |||||| ||||| Sbjct: 1558 ggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcg 1511
>dbj|AK104714.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H10, full insert sequence Length = 1892 Score = 48.1 bits (24), Expect = 0.023 Identities = 42/48 (87%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||| ||| ||||||| ||| |||||| ||||| Sbjct: 1558 ggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcg 1511
>dbj|AK066587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074H08, full insert sequence Length = 1966 Score = 48.1 bits (24), Expect = 0.023 Identities = 42/48 (87%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||||||||||||| ||| ||||||| ||| |||||| ||||| Sbjct: 1559 ggcgctgttgcacttgaatccgctgccgaagccgatctgccagacgcg 1512
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 46.1 bits (23), Expect = 0.090 Identities = 50/59 (84%) Strand = Plus / Minus Query: 358 gcgcgccacaaggcgctgttgcacttgaacccggagccgaaggcgagctgccacacgcg 416 |||||||| | || ||||||||||||||| || ||||||||| || |||||| ||||| Sbjct: 54085 gcgcgccagacggtgctgttgcacttgaagcctgagccgaagctgatctgccagacgcg 54027
>gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1576_F01, complete sequence Length = 119525 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 373 ctgttgcacttgaacccggagccgaaggcgagctgcca 410 |||||||||||||| || ||||||||| ||| |||||| Sbjct: 56636 ctgttgcacttgaagcctgagccgaagccgatctgcca 56673
>ref|NM_196970.1| Oryza sativa (japonica cultivar-group) putative fatty acid elongase 3-ketoacyl-CoA synthase (OSJNBa0001K12.18), mRNA Length = 1867 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 372 gctgttgcacttgaacccggagccgaaggcgagc 405 ||||||||||||||| |||| |||||||| |||| Sbjct: 1263 gctgttgcacttgaagccggcgccgaaggtgagc 1230
>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1112E06, complete sequence Length = 177488 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccg 390 |||||||||||||||||||||| Sbjct: 8673 ggcgctgttgcacttgaacccg 8652
>gb|AC104845.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0091E08, complete sequence Length = 119526 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 369 ggcgctgttgcacttgaacccg 390 |||||||||||||||||||||| Sbjct: 33526 ggcgctgttgcacttgaacccg 33505
>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete sequence Length = 144724 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 372 gctgttgcacttgaacccggagccgaaggcgagc 405 ||||||||||||||| |||| |||||||| |||| Sbjct: 136473 gctgttgcacttgaagccggcgccgaaggtgagc 136506
>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete sequence Length = 135216 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 372 gctgttgcacttgaacccggagccgaaggcgagc 405 ||||||||||||||| |||| |||||||| |||| Sbjct: 96355 gctgttgcacttgaagccggcgccgaaggtgagc 96322
>dbj|AK120294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051A05, full insert sequence Length = 3443 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 372 gctgttgcacttgaacccggagccgaaggcgagc 405 ||||||||||||||| |||| |||||||| |||| Sbjct: 2816 gctgttgcacttgaagccggcgccgaaggtgagc 2783
>ref|XM_468364.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1708 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 372 gctgttgcacttgaacccggagccgaagg 400 |||||||||||||||||| || ||||||| Sbjct: 1298 gctgttgcacttgaaccccgacccgaagg 1270
>gb|AY308831.1| Marchantia polymorpha FAE1 gene, complete cds Length = 2446 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 gcgctgttgcacttgaacccg 390 ||||||||||||||||||||| Sbjct: 1637 gcgctgttgcacttgaacccg 1617
>gb|AY183914.1| Marchantia polymorpha beta-ketoacyl-CoA-synthase gene, complete cds Length = 9798 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 373 ctgttgcacttgaacccggagccgaaggc 401 ||||| |||||||||||||| |||||||| Sbjct: 6580 ctgttacacttgaacccggacccgaaggc 6552
>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0053L11 Length = 147123 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 372 gctgttgcacttgaacccggagccgaagg 400 |||||||||||||||||| || ||||||| Sbjct: 95172 gctgttgcacttgaaccccgacccgaagg 95144
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 372 gctgttgcacttgaacccggagccgaagg 400 |||||||||||||||||| || ||||||| Sbjct: 33074 gctgttgcacttgaaccccgacccgaagg 33046
>dbj|AK107210.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-C01, full insert sequence Length = 1708 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 372 gctgttgcacttgaacccggagccgaagg 400 |||||||||||||||||| || ||||||| Sbjct: 1298 gctgttgcacttgaaccccgacccgaagg 1270
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome Length = 1884661 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 acaactgctacaacaccagca 121 ||||||||||||||||||||| Sbjct: 187000 acaactgctacaacaccagca 186980
>emb|CR753890.27| Zebrafish DNA sequence from clone CH211-207D8 in linkage group 9, complete sequence Length = 201771 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 ttacatgcaaatccattagcc 187 ||||||||||||||||||||| Sbjct: 163393 ttacatgcaaatccattagcc 163373
>emb|AL627344.8| Human DNA sequence from clone RP11-39H24 on chromosome 13, complete sequence Length = 97057 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 atgattaaaacccttaataa 95 |||||||||||||||||||| Sbjct: 26015 atgattaaaacccttaataa 25996
>ref|XM_782830.1| PREDICTED: Strongylocentrotus purpuratus similar to CG4006-PA, isoform A (LOC582897), mRNA Length = 1077 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tttcacacaagagcgcgcac 38 |||||||||||||||||||| Sbjct: 1020 tttcacacaagagcgcgcac 1039
>gb|AC134432.4| Mus musculus BAC clone RP24-389K11 from chromosome 8, complete sequence Length = 150334 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 caaatccattagcctgcact 193 |||||||||||||||||||| Sbjct: 78811 caaatccattagcctgcact 78830
>gb|AC123908.3| Homo sapiens chromosome 16 clone CTD-2542L18, complete sequence Length = 185321 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 gcagtccagccaggggctcc 331 |||||||||||||||||||| Sbjct: 29847 gcagtccagccaggggctcc 29866
>gb|AC058784.17|AC058784 Homo sapiens chromosome 13 clone RP11-288O16, complete sequence Length = 163781 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 atgattaaaacccttaataa 95 |||||||||||||||||||| Sbjct: 125752 atgattaaaacccttaataa 125771
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome Length = 1895994 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 ctacaacaccagcacaaatt 127 |||||||||||||||||||| Sbjct: 1715372 ctacaacaccagcacaaatt 1715353
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ctacaacaccagcacaaatt 127 |||||||||||||||||||| Sbjct: 79459 ctacaacaccagcacaaatt 79478
>emb|AL806516.4| Mouse DNA sequence from clone RP23-453N20 on chromosome X, complete sequence Length = 179534 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 aagttgacataagtttcaca 25 |||||||||||||||||||| Sbjct: 86401 aagttgacataagtttcaca 86382 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,799,956 Number of Sequences: 3902068 Number of extensions: 2799956 Number of successful extensions: 61110 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60382 Number of HSP's gapped (non-prelim): 727 length of query: 416 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 394 effective length of database: 17,147,199,772 effective search space: 6755996710168 effective search space used: 6755996710168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
