ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast26g04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 55 7e-08
2APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 39 0.006
3APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 35 0.12
4FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 35 0.12
5UL34_EHV1V (P84406) Virion gene 26 protein 32 0.61
6UL34_EHV1B (P28954) Virion gene 26 protein 32 0.61
7GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX) ... 32 1.0
8WNT3A_XENLA (P31285) Protein Wnt-3a precursor (XWnt-3a) 30 3.0
9TRPG_ASPAW (P18483) Anthranilate synthase component 2 (EC 4.1.3.... 30 3.0
10PHT1_PSEPU (Q05181) Phthalate transporter 30 3.9
11PROA_PSEPK (Q88DL4) Gamma-glutamyl phosphate reductase (GPR) (EC... 30 3.9
12NIFA_AZOCA (P09133) Nif-specific regulatory protein 29 5.1
13AMPH_HUMAN (P49418) Amphiphysin 29 5.1
14TRPG_PENCH (P24773) Anthranilate synthase component 2 (EC 4.1.3.... 29 6.7
15PROA_SYNEL (Q8DKU1) Gamma-glutamyl phosphate reductase (GPR) (EC... 29 6.7
16LEF4_NPVOP (O10340) Late expression factor 4 28 8.7

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 55.5 bits (132), Expect = 7e-08
 Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
 Frame = -2

Query: 460 IYGDYYTPVVQFMLQPEKFGFYKQLPRACCGAPGSVAKAAYNFNVTAKCGEPGAT----- 296
           ++ D Y+       +PEK GF   L   CCG  G      YNF+VTA CG+         
Sbjct: 278 VHVDIYSVKYSLFSEPEKHGFEFPLI-TCCGYGGK-----YNFSVTAPCGDTVTADDGTK 331

Query: 295 ----ACADPTTHWSWDGIHLTEAAYGHIARGWLYGPFADQPI 182
               +CA P+   +WDG H TEAA  +       G F+D P+
Sbjct: 332 IVVGSCACPSVRVNWDGAHYTEAANEYFFDQISTGAFSDPPV 373



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 21/76 (27%), Positives = 38/76 (50%)
 Frame = -2

Query: 460 IYGDYYTPVVQFMLQPEKFGFYKQLPRACCGAPGSVAKAAYNFNVTAKCGEPGATACADP 281
           +Y D YT + Q +  P  +GF ++  + CC   G ++  A        C +  +  C + 
Sbjct: 451 VYMDIYTIISQMLETPAAYGF-EETKKPCCKT-GLLSAGAL-------CKKSTSKICPNT 501

Query: 280 TTHWSWDGIHLTEAAY 233
           +++  WDG+H T+ AY
Sbjct: 502 SSYLFWDGVHPTQRAY 517



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>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 19/76 (25%), Positives = 37/76 (48%)
 Frame = -2

Query: 460 IYGDYYTPVVQFMLQPEKFGFYKQLPRACCGAPGSVAKAAYNFNVTAKCGEPGATACADP 281
           +YGD Y+   + +  PE +GF +++ + CC   G      +       C E      ++ 
Sbjct: 368 VYGDIYSIFSKMLESPEDYGF-EEIKKPCCKI-GLTKGGVF-------CKERTLKNMSNA 418

Query: 280 TTHWSWDGIHLTEAAY 233
           +++  WDG+H ++ AY
Sbjct: 419 SSYLFWDGLHPSQRAY 434



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 9/83 (10%)
 Frame = -2

Query: 457 YGDYYTPVVQFMLQPEKFGFYKQLPRACCGAPGSVAKAAYNFNVTAKCGEPGATA----- 293
           Y D Y+   +  +  +  GF   L  +CCG  G      YN+N    CG           
Sbjct: 277 YVDVYSLKHELFVHAQGHGFKGSLV-SCCGHGGK-----YNYNKGIGCGMKKIVKGKEVY 330

Query: 292 ----CADPTTHWSWDGIHLTEAA 236
               C +P     WDG+H T+AA
Sbjct: 331 IGKPCDEPDKAVVWDGVHFTQAA 353



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>UL34_EHV1V (P84406) Virion gene 26 protein|
          Length = 275

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 27/78 (34%), Positives = 37/78 (47%)
 Frame = -3

Query: 360 GPLPRRPTTSMSQPNAVSLVPLLVLIQRPTGAGTAFT*RRLLMAISPGVGYMALSQTNRL 181
           G L  RP  +M Q +  + +P++ L  R  G   A   +RLL   +   G M L Q  R 
Sbjct: 136 GGLDLRPLQAMMQISCFTRMPVVQLSFRFMGPEDASRTQRLLERAT-SFGAMELHQ-KRT 193

Query: 180 FSPCERSASAVAPVERRE 127
              C+RS   V+P E RE
Sbjct: 194 VDSCDRSNGIVSPREHRE 211



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>UL34_EHV1B (P28954) Virion gene 26 protein|
          Length = 275

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 27/78 (34%), Positives = 37/78 (47%)
 Frame = -3

Query: 360 GPLPRRPTTSMSQPNAVSLVPLLVLIQRPTGAGTAFT*RRLLMAISPGVGYMALSQTNRL 181
           G L  RP  +M Q +  + +P++ L  R  G   A   +RLL   +   G M L Q  R 
Sbjct: 136 GGLDLRPLQAMMQISCFTRMPVVQLSFRFMGPEDASRTQRLLERAT-SFGAMELHQ-KRT 193

Query: 180 FSPCERSASAVAPVERRE 127
              C+RS   V+P E RE
Sbjct: 194 VDSCDRSNGIVSPREHRE 211



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>GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX)|
           (Endo-1,4-beta-glucanase) (Cellulase) (Fragment)
          Length = 224

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -2

Query: 286 DPTTHWSWDGIHLTEAAYGHIARGW 212
           D  T  SWDG+HL+E  Y  IA  W
Sbjct: 109 DRNTDISWDGLHLSEIGYTKIANIW 133



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>WNT3A_XENLA (P31285) Protein Wnt-3a precursor (XWnt-3a)|
          Length = 352

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 7/41 (17%)
 Frame = -2

Query: 358 SVAKAAYNFNVTAKCGEPGATACADPTTH-------WSWDG 257
           ++A A   F VT  C E  AT C   T H       W W G
Sbjct: 114 AIASAGVAFAVTRSCAEGSATICGCDTHHKGPPGEGWKWGG 154



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>TRPG_ASPAW (P18483) Anthranilate synthase component 2 (EC 4.1.3.27)|
           (Anthranilate synthase component II) [Includes:
           Glutamine amidotransferase; Indole-3-glycerol phosphate
           synthase (EC 4.1.1.48) (IGPS);
           N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3
          Length = 768

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 18/66 (27%), Positives = 29/66 (43%)
 Frame = +2

Query: 119 VCYSRRSTGATAEAERSQGLNNRLVCERAI*PTPGDMAISSLRQVNAVPAPVGRWISTSS 298
           +C +R    A A  E    L   ++ +      P D+A+   + V ++P P G+   TS 
Sbjct: 536 ICGTRSEEAARAAIEAGADLIGIIMVQGRTRCVPDDVALRISQVVKSIPKPAGQTPPTSR 595

Query: 299 GTRLTA 316
           GT   A
Sbjct: 596 GTPAAA 601



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>PHT1_PSEPU (Q05181) Phthalate transporter|
          Length = 451

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +2

Query: 221 GDMAISSLRQVNAVPAPVG-RWISTSSGTRLTAFGCDIEVVGRLGNGPRSPTACPRQLLV 397
           G  AISSL Q+ A  AP+G  WI+T +G+   A G  I     L  G     A P   L 
Sbjct: 387 GISAISSLGQIGAFCAPIGLGWINTVTGS--LAIGLTIIGALVLAGGMAVLIAVPANALS 444

Query: 398 ESKL 409
           E  L
Sbjct: 445 EKPL 448



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>PROA_PSEPK (Q88DL4) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)|
           (Glutamate-5-semialdehyde dehydrogenase)
           (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA
           dehydrogenase)
          Length = 423

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +2

Query: 158 AERSQGLNNRLVCERAI*PTPGDMAISSLRQVNAVPAPVG 277
           A R+ GL   L+   A+ P   D  I+ LRQV ++P PVG
Sbjct: 59  AGRASGLEPALLDRLALTPARIDGMITGLRQVASLPDPVG 98



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>NIFA_AZOCA (P09133) Nif-specific regulatory protein|
          Length = 615

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +2

Query: 215 TPGDMAISSLRQVNAVPAPVGRWISTSSGTRLTAFGCDIEVVGRLGNGPRS-PTACPRQL 391
           T GD+A SS+    A+P P G  +S S GT        +  + ++   PR         +
Sbjct: 18  TAGDIAASSITTRGALPRPGGMPVSMSRGTSPEVALIGVYEISKILTAPRRLEVTLANVV 77

Query: 392 LVESKLLRLEH 424
            V S +L++ H
Sbjct: 78  NVLSSMLQMRH 88



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>AMPH_HUMAN (P49418) Amphiphysin|
          Length = 695

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = -2

Query: 364 PGSVAKAAYNFNVTAKCGEPGATACADPTTHWSWDGIHLTEAAYG 230
           PG+ A AA    V+A  G PG  A A+  T  + +G+ L EA  G
Sbjct: 469 PGADADAAVGTLVSAAEGAPGEEAEAEKATVPAGEGVSLEEAKIG 513



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>TRPG_PENCH (P24773) Anthranilate synthase component 2 (EC 4.1.3.27)|
           (Anthranilate synthase component II) [Includes:
           Glutamine amidotransferase; Indole-3-glycerol phosphate
           synthase (EC 4.1.1.48) (IGPS);
           N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3
          Length = 752

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = +2

Query: 101 PFSSLV-VCYSRRSTGATAEAERSQGLNNRLVCERAI*PTPGDMAISSLRQVNAVPAPVG 277
           P S LV +C +R   GA A  +    L   ++ +      P D+A+   R V + P P  
Sbjct: 515 PSSPLVKICGTRTEEGALAAIQAGADLIGIIMVQGRSRLVPDDVALGISRVVKSTPRPAD 574

Query: 278 RWISTSSGTRLTAF 319
                SS T L  F
Sbjct: 575 TLQQPSSATSLEWF 588



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>PROA_SYNEL (Q8DKU1) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)|
           (Glutamate-5-semialdehyde dehydrogenase)
           (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA
           dehydrogenase)
          Length = 439

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = +2

Query: 137 STGATAEAERSQGLNNRLVCERAI*PTPGDMAISSLRQVNAVPAPVGR---WISTSSGTR 307
           +  A  E  ++  LN  L     + P+    AI+ +RQV A+P P+G+        +G  
Sbjct: 57  ANAADCEQAKANQLNASLYARLELSPSKLAAAIAGVRQVAALPDPLGQRQLHRELDTGLI 116

Query: 308 LTAFGCDIEVVG 343
           L+   C + V+G
Sbjct: 117 LSRVTCPLGVLG 128



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>LEF4_NPVOP (O10340) Late expression factor 4|
          Length = 457

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = -3

Query: 165 RSASAVAPVERRE*HTTKLEKGK*FFHIVPMVHTCIFSFD*IHCKW 28
           RS++A+ P+ RRE   T +   +   HI  ++ T ++  D +  K+
Sbjct: 77  RSSNALVPLVRRENRETAVPHDRVSRHIASLIETTVYKLDGVDVKF 122


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,874,827
Number of Sequences: 219361
Number of extensions: 1470227
Number of successful extensions: 3659
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3655
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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