>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 325     tcttgatctcgtcgacgccgt 345
               |||||||||||||||||||||
Sbjct: 6187969 tcttgatctcgtcgacgccgt 6187949

>ref|XM_719837.1| Plasmodium yoelii yoelii str. 17XNL ubiquitin carboxyl-terminal
           hydrolase family 2 (PY04608) partial mRNA
          Length = 3519

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  aaattttaaatctgatttaaa 30
           |||||||||||||||||||||
Sbjct: 393 aaattttaaatctgatttaaa 413

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 325     tcttgatctcgtcgacgccgt 345
               |||||||||||||||||||||
Sbjct: 6852751 tcttgatctcgtcgacgccgt 6852731

>gb|BC114062.1| Bos taurus cDNA clone MGC:137539 IMAGE:8161659, complete cds
          Length = 1626

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 382 tgccgccgctggtgcagccgg 402
           |||||||||||||||||||||
Sbjct: 282 tgccgccgctggtgcagccgg 262

>gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold
          Length = 501879

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 10     aaattttaaatctgatttaaa 30
              |||||||||||||||||||||
Sbjct: 225751 aaattttaaatctgatttaaa 225771

>gb|AE004942.1| Pseudomonas aeruginosa PAO1, section 503 of 529 of the complete
            genome
          Length = 10977

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 325  tcttgatctcgtcgacgccgt 345
            |||||||||||||||||||||
Sbjct: 4822 tcttgatctcgtcgacgccgt 4802

>ref|NM_174757.2| Bos taurus aspartate beta-hydroxylase (ASPH), mRNA
          Length = 2739

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 382 tgccgccgctggtgcagccgg 402
           |||||||||||||||||||||
Sbjct: 276 tgccgccgctggtgcagccgg 256

>gb|U07832.1|PAU07832 Pseudomonas aeruginosa helicase I (helA) gene, partial cds
          Length = 2122

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 325  tcttgatctcgtcgacgccgt 345
            |||||||||||||||||||||
Sbjct: 1036 tcttgatctcgtcgacgccgt 1016

>emb|AL954171.10| Zebrafish DNA sequence from clone CH211-284B7 in linkage group 2,
             complete sequence
          Length = 148854

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 252   ccagcagcaacctagctactc 272
             |||||||||||||||||||||
Sbjct: 18903 ccagcagcaacctagctactc 18883

>gb|M91213.1|BOVASBHY Bos taurus aspartyl (asparaginyl) beta hydroxylase mRNA, complete
           cds
          Length = 2739

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 382 tgccgccgctggtgcagccgg 402
           |||||||||||||||||||||
Sbjct: 276 tgccgccgctggtgcagccgg 256

>ref|XM_464632.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 273

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 382 tgccgccgctggtgcagccg 401
           ||||||||||||||||||||
Sbjct: 216 tgccgccgctggtgcagccg 197

>ref|XM_464631.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 273

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 382 tgccgccgctggtgcagccg 401
           ||||||||||||||||||||
Sbjct: 216 tgccgccgctggtgcagccg 197

>gb|AC133896.7| Mus musculus chromosome 5, clone RP24-529E15, complete sequence
          Length = 187415

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      acccagccaaattttaaatc 21
              ||||||||||||||||||||
Sbjct: 182937 acccagccaaattttaaatc 182956

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 388     cgctggtgcagccggcggtg 407
               ||||||||||||||||||||
Sbjct: 1420650 cgctggtgcagccggcggtg 1420669

>emb|CR450766.5| Zebrafish DNA sequence from clone DKEY-192C10 in linkage group 8,
             complete sequence
          Length = 127307

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 141   aactactaattgaacagcaaatcc 164
             |||||||| |||||||||||||||
Sbjct: 82181 aactactacttgaacagcaaatcc 82204

>ref|XM_385426.1| Gibberella zeae PH-1 chromosome 3 conserved hypothetical protein
            (FG05250.1) partial mRNA
          Length = 1698

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 322  cgatcttgatctcgtcgacg 341
            ||||||||||||||||||||
Sbjct: 1564 cgatcttgatctcgtcgacg 1545

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 368     gtgctcgaagcacttgccgc 387
               ||||||||||||||||||||
Sbjct: 4074138 gtgctcgaagcacttgccgc 4074157

>gb|AC161813.2| Mus musculus chromosome 5, clone RP23-264M9, complete sequence
          Length = 154852

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     acccagccaaattttaaatc 21
             ||||||||||||||||||||
Sbjct: 72336 acccagccaaattttaaatc 72317

>gb|AC093120.4| Mus musculus Strain C57BL6/J Chromosome 6 BAC, RP23-125A24, Complete
            Sequence, complete sequence
          Length = 187794

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 227  ctgcagacttattaaacaaa 246
            ||||||||||||||||||||
Sbjct: 2484 ctgcagacttattaaacaaa 2503

>gb|AC093176.6| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP23-109H11, Complete
              Sequence, complete sequence
          Length = 192227

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    ctgcagacttattaaacaaa 246
              ||||||||||||||||||||
Sbjct: 167164 ctgcagacttattaaacaaa 167183

>gb|AC163627.4| Mus musculus BAC clone RP23-341E13 from chromosome 6, complete sequence
          Length = 191467

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   ctgcagacttattaaacaaa 246
             ||||||||||||||||||||
Sbjct: 85138 ctgcagacttattaaacaaa 85157

>gb|AC109806.12| Mus musculus chromosome 1, clone RP23-310C14, complete sequence
          Length = 198227

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   aactactaattgaacagcaa 160
             ||||||||||||||||||||
Sbjct: 24853 aactactaattgaacagcaa 24834

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 388     cgctggtgcagccggcggtg 407
               ||||||||||||||||||||
Sbjct: 3795931 cgctggtgcagccggcggtg 3795912

>gb|AE011752.1| Xanthomonas axonopodis pv. citri str. 306,  section 130 of 469 of the
             complete genome
          Length = 12030

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   cgctggtgcagccggcggtg 407
             ||||||||||||||||||||
Sbjct: 11561 cgctggtgcagccggcggtg 11580

>gb|AE012211.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 119 of
             460 of the complete genome
          Length = 14128

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   cgctggtgcagccggcggtg 407
             ||||||||||||||||||||
Sbjct: 13490 cgctggtgcagccggcggtg 13509

>gb|AC093876.3| Homo sapiens BAC clone RP11-631I21 from 4, complete sequence
          Length = 183972

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     aattttaaatctgatttaaa 30
              ||||||||||||||||||||
Sbjct: 172895 aattttaaatctgatttaaa 172876

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 388     cgctggtgcagccggcggtg 407
               ||||||||||||||||||||
Sbjct: 3727289 cgctggtgcagccggcggtg 3727270

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 380     cttgccgccgctggtgcagccggc 403
               ||||||||||||||||||| ||||
Sbjct: 2519606 cttgccgccgctggtgcaggcggc 2519583

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 382     tgccgccgctggtgcagccg 401
               ||||||||||||||||||||
Sbjct: 6414404 tgccgccgctggtgcagccg 6414385



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 382     tgccgccgctggtgcagccg 401
               ||||||||||||||||||||
Sbjct: 6406897 tgccgccgctggtgcagccg 6406878

>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1006_D05
          Length = 128178

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   tgccgccgctggtgcagccg 401
             ||||||||||||||||||||
Sbjct: 56397 tgccgccgctggtgcagccg 56378



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   tgccgccgctggtgcagccg 401
             ||||||||||||||||||||
Sbjct: 48890 tgccgccgctggtgcagccg 48871

>dbj|AK106388.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E09, full
           insert sequence
          Length = 2044

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 tgccgccgctggtgcagccg 401
           ||||||||||||||||||||
Sbjct: 89  tgccgccgctggtgcagccg 108

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 388     cgctggtgcagccggcggtg 407
               ||||||||||||||||||||
Sbjct: 3796537 cgctggtgcagccggcggtg 3796518


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,227,312
Number of Sequences: 3902068
Number of extensions: 3227312
Number of successful extensions: 58507
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58136
Number of HSP's gapped (non-prelim): 371
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)