| Clone Name | rbast26b11 |
|---|---|
| Clone Library Name | barley_pub |
>CP007_MOUSE (Q8C190) Protein C16orf7 homolog (5-day ovary-specific transcript 1| protein) Length = 649 Score = 31.2 bits (69), Expect = 0.66 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 4/34 (11%) Frame = +3 Query: 75 PTVPALPSSPLCISIHRRACTVQ----CKLLPPE 164 P VPA P +PL S HRR C+ + LPPE Sbjct: 96 PAVPAAPPTPLPTSRHRRVCSDEGGKLSPFLPPE 129
>MA2B1_CAVPO (Q8VHC8) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)| (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) Length = 1007 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = +1 Query: 40 SIYNTKRIPPSTP--RSQHSHPLLCASLYIVEHVQYSASSYHPSQYPVSRLSPL 195 S+Y+ R+ P RSQHS P +S + +Y +S+HP +S + L Sbjct: 570 SVYSVTRVSDQNPQTRSQHSRPQKYSSPVLSIKNEYLRASFHPDTGLLSMIEVL 623
>T2E7_ECOLI (P50194) Type II restriction enzyme Eco47I (EC 3.1.21.4)| (Endonuclease Eco47I) (R.Eco47I) Length = 230 Score = 28.9 bits (63), Expect = 3.3 Identities = 17/74 (22%), Positives = 33/74 (44%) Frame = +1 Query: 10 ERINEIKFIVSIYNTKRIPPSTPRSQHSHPLLCASLYIVEHVQYSASSYHPSQYPVSRLS 189 E ++ KF++ + S PRS+ + EH++Y A S+H S+ P Sbjct: 25 ELSSKFKFLIKFLSQFPEACSKPRSKKMQNKVGQE----EHIEYLARSFHESRLPRKPTP 80 Query: 190 PLLFAECIIKYIIN 231 P + ++ ++N Sbjct: 81 PTTVPDEVVSIVLN 94
>RL18_PARUW (Q6ME48) 50S ribosomal protein L18| Length = 123 Score = 28.9 bits (63), Expect = 3.3 Identities = 19/52 (36%), Positives = 25/52 (48%) Frame = -2 Query: 214 LYIPRTTRVTDDLRGTGSGGKSLHCTVHARRCIEMHRGEDGSAGTVGWTAVF 59 L + R RV LRGTG K C V + I+ +D + T+G TA F Sbjct: 11 LRVKRAVRVRKHLRGTGL--KPRLCVVKSNSHIQAQLIDDETGTTLGGTATF 60
>TPO_CANFA (P42705) Thrombopoietin precursor (Megakaryocyte colony-stimulating| factor) (C-MPL ligand) (ML) (Megakaryocyte growth and development factor) (MGDF) Length = 352 Score = 28.9 bits (63), Expect = 3.3 Identities = 16/55 (29%), Positives = 24/55 (43%) Frame = +1 Query: 16 INEIKFIVSIYNTKRIPPSTPRSQHSHPLLCASLYIVEHVQYSASSYHPSQYPVS 180 + E+ +V + T R+ P P P L + HV +S S P YP+S Sbjct: 3 LTELLLVVMLLLTARLDPCLPAPPACDPRLLNKMLRDSHVLHSRLSQCPDIYPLS 57
>GHRL_CARAU (Q8AUU1) Ghrelin precursor [Contains: Ghrelin-12; Ghrelin-19]| Length = 103 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/42 (38%), Positives = 19/42 (45%) Frame = +1 Query: 67 PSTPRSQHSHPLLCASLYIVEHVQYSASSYHPSQYPVSRLSP 192 P R+ H LLCA VE V+ S P+Q P R P Sbjct: 2 PLRRRASHMFVLLCALSLCVESVKGGTSFLSPAQKPQGRRPP 43
>Y638_HAEIN (P44796) UPF0274 protein HI0638| Length = 205 Score = 27.7 bits (60), Expect = 7.3 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 Query: 215 IIHSANNKGDRRLTGYWL 162 +IH N +GD+ LT YWL Sbjct: 68 LIHQLNAQGDQNLTRYWL 85
>FYB_HUMAN (O15117) FYN-binding protein (FYN-T-binding protein) (FYB-120/130)| (p120/p130) (SLP-76-associated phosphoprotein) (SLAP-130) Length = 783 Score = 27.3 bits (59), Expect = 9.5 Identities = 18/49 (36%), Positives = 20/49 (40%) Frame = +1 Query: 46 YNTKRIPPSTPRSQHSHPLLCASLYIVEHVQYSASSYHPSQYPVSRLSP 192 Y+T +PP P S P L AS HPSQ PV L P Sbjct: 387 YSTTSLPPPPPSHPASQPPLPAS--------------HPSQPPVPSLPP 421
>MTG8R_XENLA (Q9IAB2) Protein CBFA2T2 (MTG8-like protein) (MTG8-related protein| 1) Length = 586 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +3 Query: 81 VPALPSSPLCISIHRRACTVQCKLLPP 161 VPA+P SP+ + IH R+ LPP Sbjct: 16 VPAMPGSPMEVKIHSRSSPPIMAPLPP 42
>RNZ_CHLAB (Q5L6G2) Ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3| endonuclease) Length = 306 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = +1 Query: 34 IVSIYNTKRIPPSTPRSQHSHPLLCASLYIVEHVQYSASSYH 159 I I +T P ++++ +LC S Y+ EH + S YH Sbjct: 203 IAVIADTLPCPSIVDLAKNARIMLCESTYLEEHSHLAESHYH 244
>AGNY_APLSP (P12285) Neuroactive polyprotein R15-2 precursor [Contains: R15| alpha-1 peptide; R15 beta peptide; R15 gamma peptide] Length = 156 Score = 27.3 bits (59), Expect = 9.5 Identities = 10/16 (62%), Positives = 10/16 (62%) Frame = -2 Query: 166 GSGGKSLHCTVHARRC 119 GSGG LHC VH C Sbjct: 66 GSGGLKLHCQVHPANC 81 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,108,300 Number of Sequences: 219361 Number of extensions: 963041 Number of successful extensions: 2650 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2603 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2650 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)