ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast25c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK102253.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 2e-42
2dbj|AK069529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 2e-42
3dbj|AK059346.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 2e-42
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 98 3e-17
5gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare str... 98 3e-17
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
7dbj|AK065673.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
9dbj|AP004180.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
10ref|NM_115852.2| Arabidopsis thaliana dihydrodipicolinate reduct... 46 0.094
11ref|NM_202735.1| Arabidopsis thaliana dihydrodipicolinate reduct... 46 0.094
12emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome 3, B... 46 0.094
13emb|AJ313099.1|TAE313099 Triticum aestivum phya1 gene for phytoc... 46 0.094
14emb|BX824728.1|CNS0A6VN Arabidopsis thaliana Full-length cDNA Co... 46 0.094
15emb|BX824150.1|CNS0A6TE Arabidopsis thaliana Full-length cDNA Co... 46 0.094
16emb|BX823659.1|CNS0A6MG Arabidopsis thaliana Full-length cDNA Co... 46 0.094
17gb|AY087505.1| Arabidopsis thaliana clone 36111 mRNA, complete s... 46 0.094
18gb|BT002803.1| Arabidopsis thaliana clone RAFL14-78-L07 (R20209)... 46 0.094
19gb|AC165256.2| Mus musculus BAC clone RP23-216O10 from chromosom... 42 1.5
20gb|AF458278.1| Triticum monococcum isolate Tm13010 rga2 protein ... 42 1.5
21dbj|AP000462.2| Homo sapiens genomic DNA, chromosome 11q clone:B... 42 1.5
22emb|AL929232.3| Mouse DNA sequence from clone RP23-294G12 on chr... 42 1.5
23dbj|AB017654.1| Homo sapiens genomic DNA, chromosome 11q23.2, cl... 42 1.5
24ref|NM_129966.2| Arabidopsis thaliana dihydrodipicolinate reduct... 40 5.8
25gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 5.8
26gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial c... 40 5.8
27ref|XM_415953.1| PREDICTED: Gallus gallus similar to synaptophys... 40 5.8
28gb|DQ201141.1| Hordeum vulgare subsp. vulgare cultivar Kompolti ... 40 5.8
29gb|DQ201140.1| Hordeum vulgare subsp. vulgare cultivar Morex phy... 40 5.8
30gb|DQ201139.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo p... 40 5.8
31gb|AY270159.1| Triticum aestivum resistance protein T10rga2-1A g... 40 5.8
32gb|AC133087.3| Mus musculus BAC clone RP24-135I21 from chromosom... 40 5.8
33emb|AL022319.2|HS172B20 Human DNA sequence from clone RP1-172B20... 40 5.8
34gb|BT008540.1| Arabidopsis thaliana clone U51223 unknown protein... 40 5.8
35gb|AF458280.1| Triticum urartu isolate Tu11498 rga2 protein (rga... 40 5.8
36gb|AF458279.1| Triticum monococcum isolate Tm896 rga2 protein (r... 40 5.8
37gb|AF458277.1| Triticum turgidum subsp. dicoccoides isolate Td98... 40 5.8
38gb|AF458276.1| Triticum turgidum subsp. dicoccoides isolate Td44... 40 5.8
39gb|AF458275.1| Triticum turgidum subsp. durum isolate Langdon rg... 40 5.8
40gb|AF458273.1| Triticum aestivum isolate ThLr101A rga2 protein (... 40 5.8
41gb|AF458272.1| Triticum aestivum isolate Weique rga2 protein (rg... 40 5.8
42gb|AF458271.1| Triticum aestivum isolate Tesia rga2 protein (rga... 40 5.8
43gb|AF458270.1| Triticum aestivum isolate Pavon rga2 protein (rga... 40 5.8
44gb|AF458269.1| Triticum aestivum isolate Opata rga2 protein (rga... 40 5.8
45gb|AF458268.1| Triticum aestivum isolate Nocazari rga2 protein (... 40 5.8
46gb|AF458267.1| Triticum aestivum isolate Galvez rga2 protein (rg... 40 5.8
47gb|AF458266.1| Triticum aestivum isolate Esmer rga2 protein (rga... 40 5.8
48gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map... 40 5.8
49gb|AC087620.6| Homo sapiens chromosome 8, clone RP11-35G22, comp... 40 5.8
50gb|AC109129.3| Homo sapiens 3 BAC RP11-784B9 (Roswell Park Cance... 40 5.8
51gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156... 40 5.8
52dbj|AK118845.1| Arabidopsis thaliana At2g44040 mRNA for unknown ... 40 5.8
53emb|BX927361.31| Zebrafish DNA sequence from clone CH211-121K8 i... 40 5.8
54dbj|AP001331.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 5.8 
>dbj|AK102253.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088H16, full
            insert sequence
          Length = 1559

 Score =  180 bits (91), Expect = 2e-42
 Identities = 169/195 (86%)
 Strand = Plus / Minus

                                                                        
Query: 233  gccttcttgcaagacatcaatcatgttgtaaattctcttaggatccattgattgtacctt 292
            |||||||  ||||||||||||||| | ||||||||| || | |||  | ||  |||||||
Sbjct: 1047 gccttctctcaagacatcaatcatatcgtaaattcttttggaatcattggagcgtacctt 988

                                                                        
Query: 293  cttatacagaaatatggcggcatcaactgacccttcggcgtatattgaacggccacaaac 352
            | ||| |||||| || ||||||||||| || ||||| || ||||||||||||||||| ||
Sbjct: 987  cctatgcagaaacattgcggcatcaacagatccttcagcatatattgaacggccacagac 928

                                                                        
Query: 353  attgtgctggaactcaaatgaaacgctgtcatcgggagaagtcagatggtacaaatggaa 412
            |||||||||||| ||||||||||| ||||||||||||||||| |||||||||| ||||||
Sbjct: 927  attgtgctggaattcaaatgaaacactgtcatcgggagaagtgagatggtacagatggaa 868

                           
Query: 413  tgcatgcccatcaat 427
            ||||||||| |||||
Sbjct: 867  tgcatgcccttcaat 853
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>dbj|AK069529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019A15, full
           insert sequence
          Length = 2225

 Score =  180 bits (91), Expect = 2e-42
 Identities = 169/195 (86%)
 Strand = Plus / Minus

                                                                       
Query: 233 gccttcttgcaagacatcaatcatgttgtaaattctcttaggatccattgattgtacctt 292
           |||||||  ||||||||||||||| | ||||||||| || | |||  | ||  |||||||
Sbjct: 965 gccttctctcaagacatcaatcatatcgtaaattcttttggaatcattggagcgtacctt 906

                                                                       
Query: 293 cttatacagaaatatggcggcatcaactgacccttcggcgtatattgaacggccacaaac 352
           | ||| |||||| || ||||||||||| || ||||| || ||||||||||||||||| ||
Sbjct: 905 cctatgcagaaacattgcggcatcaacagatccttcagcatatattgaacggccacagac 846

                                                                       
Query: 353 attgtgctggaactcaaatgaaacgctgtcatcgggagaagtcagatggtacaaatggaa 412
           |||||||||||| ||||||||||| ||||||||||||||||| |||||||||| ||||||
Sbjct: 845 attgtgctggaattcaaatgaaacactgtcatcgggagaagtgagatggtacagatggaa 786

                          
Query: 413 tgcatgcccatcaat 427
           ||||||||| |||||
Sbjct: 785 tgcatgcccttcaat 771
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>dbj|AK059346.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-C01, full
           insert sequence
          Length = 1371

 Score =  180 bits (91), Expect = 2e-42
 Identities = 169/195 (86%)
 Strand = Plus / Minus

                                                                       
Query: 233 gccttcttgcaagacatcaatcatgttgtaaattctcttaggatccattgattgtacctt 292
           |||||||  ||||||||||||||| | ||||||||| || | |||  | ||  |||||||
Sbjct: 964 gccttctctcaagacatcaatcatatcgtaaattcttttggaatcattggagcgtacctt 905

                                                                       
Query: 293 cttatacagaaatatggcggcatcaactgacccttcggcgtatattgaacggccacaaac 352
           | ||| |||||| || ||||||||||| || ||||| || ||||||||||||||||| ||
Sbjct: 904 cctatgcagaaacattgcggcatcaacagatccttcagcatatattgaacggccacagac 845

                                                                       
Query: 353 attgtgctggaactcaaatgaaacgctgtcatcgggagaagtcagatggtacaaatggaa 412
           |||||||||||| ||||||||||| ||||||||||||||||| |||||||||| ||||||
Sbjct: 844 attgtgctggaattcaaatgaaacactgtcatcgggagaagtgagatggtacagatggaa 785

                          
Query: 413 tgcatgcccatcaat 427
           ||||||||| |||||
Sbjct: 784 tgcatgcccttcaat 770
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                           
Query: 288     accttcttatacagaaatatggcggcatcaactgacccttcggcgtatattgaacggcca 347
               |||||| ||| |||||| || ||||||||||| || ||||| || |||||||||||||||
Sbjct: 7644588 accttcctatgcagaaacattgcggcatcaacagatccttcagcatatattgaacggcca 7644529

                                            
Query: 348     caaacattgtgctggaactcaaatgaaac 376
               || |||||||||||||| |||||||||||
Sbjct: 7644528 cagacattgtgctggaattcaaatgaaac 7644500



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                                 
Query: 378     ctgtcatcgggagaagtcagatggtacaaatggaatgcatgcccatcaat 427
               ||||||||||||||||| |||||||||| ||||||||||||||| |||||
Sbjct: 7644428 ctgtcatcgggagaagtgagatggtacagatggaatgcatgcccttcaat 7644379



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 233     gccttcttgcaagacatcaatcatgttgtaaattct 268
               |||||||  ||||||||||||||| | |||||||||
Sbjct: 7644732 gccttctctcaagacatcaatcatatcgtaaattct 7644697
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>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0096L14, from chromosome 3, complete sequence
          Length = 131142

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                         
Query: 288   accttcttatacagaaatatggcggcatcaactgacccttcggcgtatattgaacggcca 347
             |||||| ||| |||||| || ||||||||||| || ||||| || |||||||||||||||
Sbjct: 70702 accttcctatgcagaaacattgcggcatcaacagatccttcagcatatattgaacggcca 70761

                                          
Query: 348   caaacattgtgctggaactcaaatgaaac 376
             || |||||||||||||| |||||||||||
Sbjct: 70762 cagacattgtgctggaattcaaatgaaac 70790



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                               
Query: 378   ctgtcatcgggagaagtcagatggtacaaatggaatgcatgcccatcaat 427
             ||||||||||||||||| |||||||||| ||||||||||||||| |||||
Sbjct: 70862 ctgtcatcgggagaagtgagatggtacagatggaatgcatgcccttcaat 70911



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 233   gccttcttgcaagacatcaatcatgttgtaaattct 268
             |||||||  ||||||||||||||| | |||||||||
Sbjct: 70558 gccttctctcaagacatcaatcatatcgtaaattct 70593
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                           
Query: 288     accttcttatacagaaatatggcggcatcaactgacccttcggcgtatattgaacggcca 347
               |||||| ||| |||||| || ||||||||||| || ||||| || |||||||||||||||
Sbjct: 7642423 accttcctatgcagaaacattgcggcatcaacagatccttcagcatatattgaacggcca 7642364

                                            
Query: 348     caaacattgtgctggaactcaaatgaaac 376
               || |||||||||||||| |||||||||||
Sbjct: 7642363 cagacattgtgctggaattcaaatgaaac 7642335



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                                 
Query: 378     ctgtcatcgggagaagtcagatggtacaaatggaatgcatgcccatcaat 427
               ||||||||||||||||| |||||||||| ||||||||||||||| |||||
Sbjct: 7642263 ctgtcatcgggagaagtgagatggtacagatggaatgcatgcccttcaat 7642214



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 233     gccttcttgcaagacatcaatcatgttgtaaattct 268
               |||||||  ||||||||||||||| | |||||||||
Sbjct: 7642567 gccttctctcaagacatcaatcatatcgtaaattct 7642532
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>dbj|AK065673.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035D19, full
            insert sequence
          Length = 1317

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                        
Query: 330  gcgtatattgaacggccacaaacattgtgctggaactcaaatgaaacgctgtcatcggga 389
            ||||| |||||||||||||| |||||||| || ||||||||||||||  | ||||| || 
Sbjct: 1004 gcgtaaattgaacggccacatacattgtgttgaaactcaaatgaaactgtctcatccggt 945

                            
Query: 390  gaagtcagatggtaca 405
            ||||| ||||||||||
Sbjct: 944  gaagtgagatggtaca 929
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                               
Query: 330      gcgtatattgaacggccacaaacattgtgctggaactcaaatgaaac 376
                ||||| |||||||||||||| |||||||| || ||||||||||||||
Sbjct: 14017503 gcgtaaattgaacggccacatacattgtgttgaaactcaaatgaaac 14017549
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>dbj|AP004180.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1126_B05
          Length = 117057

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 330   gcgtatattgaacggccacaaacattgtgctggaactcaaatgaaac 376
             ||||| |||||||||||||| |||||||| || ||||||||||||||
Sbjct: 87141 gcgtaaattgaacggccacatacattgtgttgaaactcaaatgaaac 87187
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>ref|NM_115852.2| Arabidopsis thaliana dihydrodipicolinate reductase AT3G59890
           transcript variant AT3G59890.1 mRNA, complete cds
          Length = 1370

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 348 caaacattgtgctggaactcaaa 370
           |||||||||||||||||||||||
Sbjct: 988 caaacattgtgctggaactcaaa 966
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>ref|NM_202735.1| Arabidopsis thaliana dihydrodipicolinate reductase AT3G59890
            transcript variant AT3G59890.2 mRNA, complete cds
          Length = 1446

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 348  caaacattgtgctggaactcaaa 370
            |||||||||||||||||||||||
Sbjct: 1020 caaacattgtgctggaactcaaa 998
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>emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F24G16
          Length = 100906

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 348   caaacattgtgctggaactcaaa 370
             |||||||||||||||||||||||
Sbjct: 57535 caaacattgtgctggaactcaaa 57557
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>emb|AJ313099.1|TAE313099 Triticum aestivum phya1 gene for phytochrome A, exons 1-4
          Length = 6323

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 25   tcttatagaagtttacagagggagtac 51
            ||||||| |||||||||||||||||||
Sbjct: 1372 tcttataaaagtttacagagggagtac 1398
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>emb|BX824728.1|CNS0A6VN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH68ZC04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1446

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 348  caaacattgtgctggaactcaaa 370
            |||||||||||||||||||||||
Sbjct: 1020 caaacattgtgctggaactcaaa 998
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>emb|BX824150.1|CNS0A6TE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH26ZE12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1338

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 348 caaacattgtgctggaactcaaa 370
           |||||||||||||||||||||||
Sbjct: 954 caaacattgtgctggaactcaaa 932
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>emb|BX823659.1|CNS0A6MG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS63ZB03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1316

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 348 caaacattgtgctggaactcaaa 370
           |||||||||||||||||||||||
Sbjct: 950 caaacattgtgctggaactcaaa 928
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>gb|AY087505.1| Arabidopsis thaliana clone 36111 mRNA, complete sequence
          Length = 1322

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 348 caaacattgtgctggaactcaaa 370
           |||||||||||||||||||||||
Sbjct: 988 caaacattgtgctggaactcaaa 966
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>gb|BT002803.1| Arabidopsis thaliana clone RAFL14-78-L07 (R20209) At3g59890 mRNA,
           complete sequence
          Length = 1295

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 348 caaacattgtgctggaactcaaa 370
           |||||||||||||||||||||||
Sbjct: 943 caaacattgtgctggaactcaaa 921
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>gb|AC165256.2| Mus musculus BAC clone RP23-216O10 from chromosome 9, complete sequence
          Length = 231728

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 187   ctgttttgatggatgaagatg 207
             |||||||||||||||||||||
Sbjct: 62330 ctgttttgatggatgaagatg 62350
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>gb|AF458278.1| Triticum monococcum isolate Tm13010 rga2 protein (rga2) gene,
           partial cds
          Length = 1439

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 23  agtcttatagaagtttacagagggagtac 51
           |||||||||  ||||||||||||||||||
Sbjct: 248 agtcttatattagtttacagagggagtac 276
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>dbj|AP000462.2| Homo sapiens genomic DNA, chromosome 11q clone:B4H11, complete
             sequences
          Length = 114467

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 398   atggtacaaatggaatgcatg 418
             |||||||||||||||||||||
Sbjct: 59656 atggtacaaatggaatgcatg 59636
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>emb|AL929232.3| Mouse DNA sequence from clone RP23-294G12 on chromosome 2, complete
             sequence
          Length = 76864

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 192   ttgatggatgaagatgctaaa 212
             |||||||||||||||||||||
Sbjct: 22969 ttgatggatgaagatgctaaa 22949
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>dbj|AB017654.1| Homo sapiens genomic DNA, chromosome 11q23.2, clone:KB4H11, complete
             sequence
          Length = 170965

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 398   atggtacaaatggaatgcatg 418
             |||||||||||||||||||||
Sbjct: 54812 atggtacaaatggaatgcatg 54832
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>ref|NM_129966.2| Arabidopsis thaliana dihydrodipicolinate reductase AT2G44040 mRNA,
           complete cds
          Length = 1293

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 336 attgaacggccacaaacattgtgctggaactc 367
           ||||| ||||| || |||||||||||||||||
Sbjct: 962 attgatcggccgcagacattgtgctggaactc 931
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 76      cacgtcctgccggttccgga 95
               ||||||||||||||||||||
Sbjct: 2062811 cacgtcctgccggttccgga 2062792
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>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative
             chromosome condensation factor (CCF), putative resistance
             protein (RGA-2), putative resistance protein (RGA2) and
             putative nodulin-like-like protein (NLL) gene, complete
             cds; and retrotransposons Josephine, Angela-2, Angela-4,
             Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6,
             Angela-5, Barbara, Isabelle, Erika-2, and Claudia
          Length = 211009

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 24    gtcttatagaagtttacagagggagtac 51
             ||||||||  ||||||||||||||||||
Sbjct: 29766 gtcttatattagtttacagagggagtac 29739
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>ref|XM_415953.1| PREDICTED: Gallus gallus similar to synaptophysin-like protein
            isoform b; pantophysin (LOC417708), mRNA
          Length = 1908

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 200  tgaagatgctaaacagtaac 219
            ||||||||||||||||||||
Sbjct: 1391 tgaagatgctaaacagtaac 1410
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>gb|DQ201141.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai phytochrome A
            (PhyA) gene, complete cds
          Length = 6659

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    aaaacgtcttagaaaagtttacag 24
            ||||||||||| ||||||||||||
Sbjct: 1206 aaaacgtcttacaaaagtttacag 1183
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>gb|DQ201140.1| Hordeum vulgare subsp. vulgare cultivar Morex phytochrome A (PhyA)
            gene, complete cds
          Length = 6652

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    aaaacgtcttagaaaagtttacag 24
            ||||||||||| ||||||||||||
Sbjct: 1206 aaaacgtcttacaaaagtttacag 1183
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>gb|DQ201139.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome A (PhyA)
            gene, complete cds
          Length = 6652

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    aaaacgtcttagaaaagtttacag 24
            ||||||||||| ||||||||||||
Sbjct: 1206 aaaacgtcttacaaaagtttacag 1183
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>gb|AY270159.1| Triticum aestivum resistance protein T10rga2-1A gene, complete cds
          Length = 4768

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 24   gtcttatagaagtttacagagggagtac 51
            ||||||||  ||||||||||||||||||
Sbjct: 1163 gtcttatattagtttacagagggagtac 1190
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>gb|AC133087.3| Mus musculus BAC clone RP24-135I21 from chromosome 13, complete
             sequence
          Length = 157768

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    tacagtcttatagaagttta 39
             ||||||||||||||||||||
Sbjct: 41504 tacagtcttatagaagttta 41523
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>emb|AL022319.2|HS172B20 Human DNA sequence from clone RP1-172B20 on chromosome 22q12.3-13.1
             Contains the 3' part of the CACNA1I gene for
             voltage-dependent calcium channel, alpha 1I subunit, ESTs,
             STSs, GSSs and a putative CpG island, complete sequence
          Length = 213721

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 174   gcgccccaaccctctgtttt 193
             ||||||||||||||||||||
Sbjct: 34968 gcgccccaaccctctgtttt 34949
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>gb|BT008540.1| Arabidopsis thaliana clone U51223 unknown protein (At2g44040) mRNA,
           complete cds
          Length = 1075

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 336 attgaacggccacaaacattgtgctggaactc 367
           ||||| ||||| || |||||||||||||||||
Sbjct: 929 attgatcggccgcagacattgtgctggaactc 898
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>gb|AF458280.1| Triticum urartu isolate Tu11498 rga2 protein (rga2) gene, partial
           cds
          Length = 1437

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 24  gtcttatagaagtttacagagggagtac 51
           ||||||||  ||||||||||||||||||
Sbjct: 249 gtcttatattagtttacagagggagtac 276
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>gb|AF458279.1| Triticum monococcum isolate Tm896 rga2 protein (rga2) gene, partial
           cds
          Length = 1438

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 24  gtcttatagaagtttacagagggagtac 51
           ||||||||  ||||||||||||||||||
Sbjct: 250 gtcttatattagtttacagagggagtac 277
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>gb|AF458277.1| Triticum turgidum subsp. dicoccoides isolate Td9803 rga2 protein
           (rga2) gene, partial cds
          Length = 1441

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 24  gtcttatagaagtttacagagggagtac 51
           ||||||||  ||||||||||||||||||
Sbjct: 252 gtcttatattagtttacagagggagtac 279
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>gb|AF458276.1| Triticum turgidum subsp. dicoccoides isolate Td4467 rga2 protein
           (rga2) gene, partial cds
          Length = 1436

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 24  gtcttatagaagtttacagagggagtac 51
           ||||||||  ||||||||||||||||||
Sbjct: 249 gtcttatattagtttacagagggagtac 276
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>gb|AF458275.1| Triticum turgidum subsp. durum isolate Langdon rga2 protein (rga2)
           gene, partial cds
          Length = 1438

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 24  gtcttatagaagtttacagagggagtac 51
           ||||||||  ||||||||||||||||||
Sbjct: 249 gtcttatattagtttacagagggagtac 276
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>gb|AF458273.1| Triticum aestivum isolate ThLr101A rga2 protein (rga2) gene,
           partial cds
          Length = 1438

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 24  gtcttatagaagtttacagagggagtac 51
           ||||||||  ||||||||||||||||||
Sbjct: 249 gtcttatattagtttacagagggagtac 276
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>gb|AF458272.1| Triticum aestivum isolate Weique rga2 protein (rga2) gene, partial
           cds
          Length = 1435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 24  gtcttatagaagtttacagagggagtac 51
           ||||||||  ||||||||||||||||||
Sbjct: 249 gtcttatattagtttacagagggagtac 276
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>gb|AF458271.1| Triticum aestivum isolate Tesia rga2 protein (rga2) gene, partial
           cds
          Length = 1438

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 24  gtcttatagaagtttacagagggagtac 51
           ||||||||  ||||||||||||||||||
Sbjct: 249 gtcttatattagtttacagagggagtac 276
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>gb|AF458270.1| Triticum aestivum isolate Pavon rga2 protein (rga2) gene, partial
           cds
          Length = 1438

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 24  gtcttatagaagtttacagagggagtac 51
           ||||||||  ||||||||||||||||||
Sbjct: 249 gtcttatattagtttacagagggagtac 276
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>gb|AF458269.1| Triticum aestivum isolate Opata rga2 protein (rga2) gene, partial
           cds
          Length = 1437

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 24  gtcttatagaagtttacagagggagtac 51
           ||||||||  ||||||||||||||||||
Sbjct: 249 gtcttatattagtttacagagggagtac 276
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>gb|AF458268.1| Triticum aestivum isolate Nocazari rga2 protein (rga2) gene,
           partial cds
          Length = 1437

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 24  gtcttatagaagtttacagagggagtac 51
           ||||||||  ||||||||||||||||||
Sbjct: 248 gtcttatattagtttacagagggagtac 275
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>gb|AF458267.1| Triticum aestivum isolate Galvez rga2 protein (rga2) gene, partial
           cds
          Length = 1436

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 24  gtcttatagaagtttacagagggagtac 51
           ||||||||  ||||||||||||||||||
Sbjct: 248 gtcttatattagtttacagagggagtac 275
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>gb|AF458266.1| Triticum aestivum isolate Esmer rga2 protein (rga2) gene, partial
           cds
          Length = 1437

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 24  gtcttatagaagtttacagagggagtac 51
           ||||||||  ||||||||||||||||||
Sbjct: 249 gtcttatattagtttacagagggagtac 276
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>gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map CIC10F02, CIC02E07,
             complete sequence
          Length = 109741

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 336   attgaacggccacaaacattgtgctggaactc 367
             ||||| ||||| || |||||||||||||||||
Sbjct: 52488 attgatcggccgcagacattgtgctggaactc 52519
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>gb|AC087620.6| Homo sapiens chromosome 8, clone RP11-35G22, complete sequence
          Length = 154034

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   ttgtgctggaactcaaatga 373
             ||||||||||||||||||||
Sbjct: 16643 ttgtgctggaactcaaatga 16624
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>gb|AC109129.3| Homo sapiens 3 BAC RP11-784B9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181158

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     aagtttacagtcttatagaa 34
              ||||||||||||||||||||
Sbjct: 163183 aagtttacagtcttatagaa 163202
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>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence
          Length = 187012

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 24    gtcttatagaagtttacagagggagtac 51
             ||||||||  ||||||||||||||||||
Sbjct: 47521 gtcttatattagtttacagagggagtac 47494
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>dbj|AK118845.1| Arabidopsis thaliana At2g44040 mRNA for unknown protein, complete
           cds, clone: RAFL21-17-I11
          Length = 1294

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 336 attgaacggccacaaacattgtgctggaactc 367
           ||||| ||||| || |||||||||||||||||
Sbjct: 963 attgatcggccgcagacattgtgctggaactc 932
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>emb|BX927361.31| Zebrafish DNA sequence from clone CH211-121K8 in linkage group 9,
              complete sequence
          Length = 177986

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 381    tcatcgggagaagtcagatggtac 404
              |||||||| |||||||||||||||
Sbjct: 157785 tcatcgggtgaagtcagatggtac 157762
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>dbj|AP001331.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1153C10
          Length = 207620

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    ttgtgctggaactcaaatga 373
              ||||||||||||||||||||
Sbjct: 161384 ttgtgctggaactcaaatga 161365


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,305,194
Number of Sequences: 3902068
Number of extensions: 3305194
Number of successful extensions: 57908
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57730
Number of HSP's gapped (non-prelim): 175
length of query: 431
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 409
effective length of database: 17,147,199,772
effective search space: 7013204706748
effective search space used: 7013204706748
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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