| Clone Name | rbast25c06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 tccatcccgattcccgaac 49 ||||||||||||||||||| Sbjct: 1150815 tccatcccgattcccgaac 1150797
>gb|AC159139.9| Mus musculus 10 BAC RP24-370M23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 185202 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 attaccatttaacacttga 23 ||||||||||||||||||| Sbjct: 66052 attaccatttaacacttga 66070
>emb|BX322794.6| Zebrafish DNA sequence from clone RP71-44B8 in linkage group 23, complete sequence Length = 144572 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 ccatttaacacttgataca 27 ||||||||||||||||||| Sbjct: 112816 ccatttaacacttgataca 112834
>ref|XM_572155.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 2547 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 tccatcccgattcccgaac 49 ||||||||||||||||||| Sbjct: 808 tccatcccgattcccgaac 826
>emb|AL845287.10| Zebrafish DNA sequence from clone DKEY-78K11, complete sequence Length = 174301 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 ccatttaacacttgataca 27 ||||||||||||||||||| Sbjct: 150920 ccatttaacacttgataca 150938
>gb|AC100927.11| Mus musculus chromosome 3, clone RP23-72A21, complete sequence Length = 196709 Score = 36.2 bits (18), Expect = 8.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 accatttaacacttgata 25 |||||||||||||||||| Sbjct: 1148 accatttaacacttgata 1131
>gb|AC121785.3| Mus musculus BAC clone RP23-382K4 from chromosome 3, complete sequence Length = 197272 Score = 36.2 bits (18), Expect = 8.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 accatttaacacttgata 25 |||||||||||||||||| Sbjct: 169299 accatttaacacttgata 169282
>ref|XM_950025.1| Theileria annulata strain Ankara mitochondrial carrier (TA04520) partial mRNA Length = 918 Score = 36.2 bits (18), Expect = 8.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 14 taacacttgatacatgatccat 35 ||||| |||||||||||||||| Sbjct: 22 taacatttgatacatgatccat 1
>gb|AC156244.2| Xenopus tropicalis clone CH216-92I18, complete sequence Length = 140675 Score = 36.2 bits (18), Expect = 8.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 cataattaccatttaaca 18 |||||||||||||||||| Sbjct: 124307 cataattaccatttaaca 124290
>gb|AC083806.16| Homo sapiens 12q BAC RP11-240G22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164461 Score = 36.2 bits (18), Expect = 8.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 aattaccatttaacactt 21 |||||||||||||||||| Sbjct: 69637 aattaccatttaacactt 69620
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 36.2 bits (18), Expect = 8.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 31 tccatcccgattcccgaa 48 |||||||||||||||||| Sbjct: 449895 tccatcccgattcccgaa 449878
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 36.2 bits (18), Expect = 8.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 22 gatacatgatccatcccg 39 |||||||||||||||||| Sbjct: 1776624 gatacatgatccatcccg 1776641
>gb|U53332.2| Caenorhabditis elegans cosmid F59G1, complete sequence Length = 25643 Score = 36.2 bits (18), Expect = 8.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 ttaccatttaacacttga 23 |||||||||||||||||| Sbjct: 18771 ttaccatttaacacttga 18788
>gb|AC023913.7|AC023913 Arabidopsis thaliana chromosome 1 BAC F7P12 genomic sequence, complete sequence Length = 82214 Score = 36.2 bits (18), Expect = 8.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 cataattaccatttaaca 18 |||||||||||||||||| Sbjct: 61174 cataattaccatttaaca 61157
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 36.2 bits (18), Expect = 8.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 32 ccatcccgattcccgaac 49 |||||||||||||||||| Sbjct: 1902275 ccatcccgattcccgaac 1902292 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 309,024 Number of Sequences: 3902068 Number of extensions: 309024 Number of successful extensions: 21455 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 21372 Number of HSP's gapped (non-prelim): 83 length of query: 57 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 36 effective length of database: 17,151,101,840 effective search space: 617439666240 effective search space used: 617439666240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)