ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast24g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BSMAP_RAT (Q5HZE8) Brain-specific membrane-anchored protein prec... 30 2.2

>BSMAP_RAT (Q5HZE8) Brain-specific membrane-anchored protein precursor|
          Length = 331

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +2

Query: 92  LVASTVYTSVETDRVQLQPTPD--AFFCSTLGK*ILFWRNNHPTFLQAFHD 238
           L++ST   S++TD  + QP  +  AF  S L +  + WR +HP  L+   D
Sbjct: 162 LISSTWTYSLQTDNRKTQPVVENFAFQGSRLQRVEVTWRGSHPKALEVHMD 212


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,850,176
Number of Sequences: 219361
Number of extensions: 588707
Number of successful extensions: 1567
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1564
length of database: 80,573,946
effective HSP length: 57
effective length of database: 68,070,369
effective search space used: 1633688856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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