| Clone Name | rbast24e09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 44.1 bits (22), Expect = 0.11 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 tggttccttggctgttcttgttcaat 125 ||||||||||||||||||| |||||| Sbjct: 5428256 tggttccttggctgttctttttcaat 5428231
>gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, complete sequence Length = 255663 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tcaataaaaccagttgggtc 140 |||||||||||||||||||| Sbjct: 119578 tcaataaaaccagttgggtc 119559
>emb|AL365274.17| Human DNA sequence from clone RP11-298A17 on chromosome 9 Contains the DAB2IP gene for DAB2 interacting protein (AF9Q34, DIP1/2, KIAA1743) and four CpG islands, complete sequence Length = 171941 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccttggctgttcttgttcaa 124 |||||||||||||||||||| Sbjct: 50760 ccttggctgttcttgttcaa 50779
>dbj|AK039483.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330049K02 product:unclassifiable, full insert sequence Length = 1688 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tcaataaaaccagttgggtc 140 |||||||||||||||||||| Sbjct: 1186 tcaataaaaccagttgggtc 1167
>gb|AC084617.1|CBRG44G18 Caenorhabditis briggsae cosmid G44G18, complete sequence Length = 42360 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 gatccttacaagttgcaagg 30 |||||||||||||||||||| Sbjct: 37050 gatccttacaagttgcaagg 37069
>ref|NM_133766.2| Mus musculus RIKEN cDNA C920006C10 gene (C920006C10Rik), mRNA Length = 5225 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tcaataaaaccagttgggtc 140 |||||||||||||||||||| Sbjct: 4658 tcaataaaaccagttgggtc 4639
>dbj|AB158474.1| Mus musculus KIAA0143 mRNA for similar to conserved membrane protein at 44E, complete cds Length = 5225 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tcaataaaaccagttgggtc 140 |||||||||||||||||||| Sbjct: 4658 tcaataaaaccagttgggtc 4639
>gb|AC107757.15| Mus musculus chromosome 15, clone RP23-207L14, complete sequence Length = 208483 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 119 gttcaataaaaccagttgg 137 ||||||||||||||||||| Sbjct: 142525 gttcaataaaaccagttgg 142543
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 117 ttgttcaataaaaccagtt 135 ||||||||||||||||||| Sbjct: 3424584 ttgttcaataaaaccagtt 3424566
>gb|AC145818.1| Pan troglodytes BAC clone RP43-8O12 from 7, complete sequence Length = 92193 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 gctacatgctaatgaggaa 99 ||||||||||||||||||| Sbjct: 24355 gctacatgctaatgaggaa 24337
>emb|Z70688.1|HSN27C5 Human DNA sequence from clone LL22NC03-27C5 on chromosome 22, complete sequence Length = 41375 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 tccttggctgttcttgttc 122 ||||||||||||||||||| Sbjct: 20615 tccttggctgttcttgttc 20597
>emb|AL133383.10| Human DNA sequence from clone GS1-204I12 on chromosome 1 Contains two novel genes, complete sequence Length = 204158 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 94 gaggaatggttccttggct 112 ||||||||||||||||||| Sbjct: 44837 gaggaatggttccttggct 44855
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 ggactgatcgagaatggaa 55 ||||||||||||||||||| Sbjct: 1487955 ggactgatcgagaatggaa 1487937
>gb|AC078846.2|AC078846 Homo sapiens chromosome 7 clone RP11-448A19, complete sequence Length = 219428 Score = 38.2 bits (19), Expect = 7.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 gctacatgctaatgaggaa 99 ||||||||||||||||||| Sbjct: 136535 gctacatgctaatgaggaa 136553 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,069,414 Number of Sequences: 3902068 Number of extensions: 1069414 Number of successful extensions: 73738 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73695 Number of HSP's gapped (non-prelim): 43 length of query: 146 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 125 effective length of database: 17,151,101,840 effective search space: 2143887730000 effective search space used: 2143887730000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)