>gb|AC017019.3|AC017019 Homo sapiens BAC clone RP11-182H20 from Y, complete sequence
          Length = 162379

 Score = 42.1 bits (21), Expect = 0.27
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 22     caatgactcacccctgcaaca 42
              |||||||||||||||||||||
Sbjct: 117623 caatgactcacccctgcaaca 117603

>gb|AC006335.2|AC006335 Homo sapiens BAC clone RP11-492C2 from Y, complete sequence
          Length = 222512

 Score = 42.1 bits (21), Expect = 0.27
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     caatgactcacccctgcaaca 42
              |||||||||||||||||||||
Sbjct: 170109 caatgactcacccctgcaaca 170129

>gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complete sequence
          Length = 179362

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 8      aaaaacatcatcaccaatgactca 31
              |||||||| |||||||||||||||
Sbjct: 100072 aaaaacataatcaccaatgactca 100049

>gb|AC023713.4| Drosophila melanogaster X BAC RP98-24A2 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 181178

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     actaaaaacatcatcaccaa 24
             ||||||||||||||||||||
Sbjct: 28404 actaaaaacatcatcaccaa 28423

>ref|NM_167146.1| Drosophila melanogaster Ubc-E2H CG2257-RC, transcript variant C
           (Ubc-E2H), mRNA
          Length = 2332

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   actaaaaacatcatcaccaa 24
           ||||||||||||||||||||
Sbjct: 110 actaaaaacatcatcaccaa 129

>ref|NM_132210.2| Drosophila melanogaster Ubc-E2H CG2257-RB, transcript variant B
           (Ubc-E2H), mRNA
          Length = 2278

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   actaaaaacatcatcaccaa 24
           ||||||||||||||||||||
Sbjct: 92  actaaaaacatcatcaccaa 111

>gb|AY061237.1| Drosophila melanogaster LD17992 full length cDNA
          Length = 2290

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   actaaaaacatcatcaccaa 24
           ||||||||||||||||||||
Sbjct: 92  actaaaaacatcatcaccaa 111

>gb|AC007359.3|AC007359 Homo sapiens BAC clone RP11-66M18 from Y, complete sequence
          Length = 100627

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    aatgactcacccctgcaaca 42
             ||||||||||||||||||||
Sbjct: 69359 aatgactcacccctgcaaca 69378

>gb|AC008175.2|AC008175 Homo sapiens BAC clone RP11-427G18 from Y, complete sequence
          Length = 205237

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    aatgactcacccctgcaaca 42
             ||||||||||||||||||||
Sbjct: 34970 aatgactcacccctgcaaca 34951

>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
              (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     aatgactcacccctgcaaca 42
              ||||||||||||||||||||
Sbjct: 674065 aatgactcacccctgcaaca 674046



 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     aatgactcacccctgcaaca 42
              ||||||||||||||||||||
Sbjct: 290569 aatgactcacccctgcaaca 290588

>gb|AE003442.3| Drosophila melanogaster chromosome X, section 26 of 74 of the complete
              sequence
          Length = 316794

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      actaaaaacatcatcaccaa 24
              ||||||||||||||||||||
Sbjct: 292551 actaaaaacatcatcaccaa 292532

>emb|BX323794.17| Zebrafish DNA sequence from clone CH211-247C16 in linkage group 17,
             complete sequence
          Length = 91210

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    aacatcatcaccaatgact 29
             |||||||||||||||||||
Sbjct: 66038 aacatcatcaccaatgact 66020

>emb|BX957288.10| Zebrafish DNA sequence from clone DKEY-146P4 in linkage group 12,
              complete sequence
          Length = 172591

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 11     aacatcatcaccaatgact 29
              |||||||||||||||||||
Sbjct: 103369 aacatcatcaccaatgact 103387

>gb|AC127318.4| Mus musculus BAC clone RP23-228J12 from chromosome 9, complete sequence
          Length = 168789

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 47     aatggacttgtccatcatggatt 69
              ||||||||||||| |||||||||
Sbjct: 117151 aatggacttgtccctcatggatt 117173

>emb|BX072572.8| Zebrafish DNA sequence from clone CH211-119A17, complete sequence
          Length = 173988

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    aacatcatcaccaatgact 29
             |||||||||||||||||||
Sbjct: 87048 aacatcatcaccaatgact 87066

>gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map CIC10F02, CIC02E07,
            complete sequence
          Length = 109741

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 8    aaaaacatcatcaccaatg 26
            |||||||||||||||||||
Sbjct: 7736 aaaaacatcatcaccaatg 7718

>emb|BX248080.21| Zebrafish DNA sequence from clone CH211-226C1 in linkage group 5,
              complete sequence
          Length = 188075

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 11     aacatcatcaccaatgact 29
              |||||||||||||||||||
Sbjct: 182588 aacatcatcaccaatgact 182570



 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 11     aacatcatcaccaatgact 29
              |||||||||||||||||||
Sbjct: 160657 aacatcatcaccaatgact 160639

>emb|BX890635.7| Zebrafish DNA sequence from clone DKEY-120M5, complete sequence
          Length = 96924

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 14    atcatcaccaatgactcac 32
             |||||||||||||||||||
Sbjct: 43107 atcatcaccaatgactcac 43089

>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 7       taaaaacatcatcaccaat 25
               |||||||||||||||||||
Sbjct: 1723855 taaaaacatcatcaccaat 1723873

>emb|BX119987.6| Zebrafish DNA sequence from clone DKEY-242G16 in linkage group 19,
             complete sequence
          Length = 153687

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    aacatcatcaccaatgact 29
             |||||||||||||||||||
Sbjct: 10615 aacatcatcaccaatgact 10633

>emb|AL954634.12| Zebrafish DNA sequence from clone DKEY-58C20 in linkage group 14,
             complete sequence
          Length = 195499

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    aacatcatcaccaatgact 29
             |||||||||||||||||||
Sbjct: 60374 aacatcatcaccaatgact 60356

>emb|BX571883.3| Zebrafish DNA sequence from clone DKEY-151P17 in linkage group 18,
             complete sequence
          Length = 253172

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    aacatcatcaccaatgact 29
             |||||||||||||||||||
Sbjct: 72131 aacatcatcaccaatgact 72113

>emb|BX908397.7| Zebrafish DNA sequence from clone CH211-103F16 in linkage group 22,
             complete sequence
          Length = 87359

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    aatgactcacccctgcaac 41
             |||||||||||||||||||
Sbjct: 32331 aatgactcacccctgcaac 32313

>emb|CR392029.12| Zebrafish DNA sequence from clone DKEY-188H10 in linkage group 3,
             complete sequence
          Length = 130871

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    aacatcatcaccaatgact 29
             |||||||||||||||||||
Sbjct: 97854 aacatcatcaccaatgact 97836

>emb|CR936402.11| Zebrafish DNA sequence from clone CH211-276P20 in linkage group 3,
             complete sequence
          Length = 92277

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    aacatcatcaccaatgact 29
             |||||||||||||||||||
Sbjct: 34038 aacatcatcaccaatgact 34056

>emb|AL929291.9| Zebrafish DNA sequence from clone CH211-189P10 in linkage group 20,
              complete sequence
          Length = 149681

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 11     aacatcatcaccaatgact 29
              |||||||||||||||||||
Sbjct: 133408 aacatcatcaccaatgact 133426

>emb|CR626962.9| Zebrafish DNA sequence from clone CH211-15D5 in linkage group 17,
             complete sequence
          Length = 117015

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    aacatcatcaccaatgact 29
             |||||||||||||||||||
Sbjct: 47293 aacatcatcaccaatgact 47311

>emb|AL845369.7| Zebrafish DNA sequence from clone CH211-12E13 in linkage group 5,
             complete sequence
          Length = 190981

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    aacatcatcaccaatgact 29
             |||||||||||||||||||
Sbjct: 78833 aacatcatcaccaatgact 78815



 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    aacatcatcaccaatgact 29
             |||||||||||||||||||
Sbjct: 56993 aacatcatcaccaatgact 56975

>emb|AL807755.7| Mouse DNA sequence from clone RP23-394N20 on chromosome X, complete
             sequence
          Length = 203068

 Score = 38.2 bits (19), Expect = 4.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     ctaaaaacatcatcaccaa 24
             |||||||||||||||||||
Sbjct: 24610 ctaaaaacatcatcaccaa 24628


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 802,323
Number of Sequences: 3902068
Number of extensions: 802323
Number of successful extensions: 54743
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54653
Number of HSP's gapped (non-prelim): 90
length of query: 96
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 75
effective length of database: 17,151,101,840
effective search space: 1286332638000
effective search space used: 1286332638000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)