ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast24d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NEL_CHICK (Q90827) Protein NEL precursor (93 kDa protein) 33 0.23
2NELL2_HUMAN (Q99435) Protein kinase C-binding protein NELL2 prec... 33 0.30
3NELL1_HUMAN (Q92832) Protein kinase C-binding protein NELL1 prec... 31 0.86
4NELL1_RAT (Q62919) Protein kinase C-binding protein NELL1 precur... 30 2.5
5NELL2_RAT (Q62918) Protein kinase C-binding protein NELL2 precur... 29 3.3
6NELL2_MOUSE (Q61220) Protein kinase C-binding protein NELL2 prec... 28 5.6

>NEL_CHICK (Q90827) Protein NEL precursor (93 kDa protein)|
          Length = 816

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = -2

Query: 81  GDGWQWACQSTRLLQYLVDCFPLP 10
           GD W   CQ  R LQ  VDC+PLP
Sbjct: 712 GDSWIQNCQQCRCLQGEVDCWPLP 735



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>NELL2_HUMAN (Q99435) Protein kinase C-binding protein NELL2 precursor (NEL-like|
           protein 2) (Nel-related protein 2)
          Length = 816

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = -2

Query: 81  GDGWQWACQSTRLLQYLVDCFPLP 10
           GD W   CQ  R LQ  VDC+PLP
Sbjct: 712 GDTWVQNCQQCRCLQGEVDCWPLP 735



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>NELL1_HUMAN (Q92832) Protein kinase C-binding protein NELL1 precursor (NEL-like|
           protein 1) (Nel-related protein 1)
          Length = 810

 Score = 31.2 bits (69), Expect = 0.86
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 81  GDGWQWACQSTRLLQYLVDCFPL 13
           GD W  +CQ  R L+  VDC+PL
Sbjct: 706 GDNWTHSCQQCRCLEGEVDCWPL 728



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>NELL1_RAT (Q62919) Protein kinase C-binding protein NELL1 precursor (NEL-like|
           protein 1)
          Length = 810

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 81  GDGWQWACQSTRLLQYLVDCFPL 13
           GD W  +CQ  R L+   DC+PL
Sbjct: 706 GDNWTHSCQQCRCLEGEADCWPL 728



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>NELL2_RAT (Q62918) Protein kinase C-binding protein NELL2 precursor (NEL-like|
           protein 2)
          Length = 816

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 81  GDGWQWACQSTRLLQYLVDCFPL 13
           GD W   C+  R LQ  VDC+PL
Sbjct: 712 GDTWAQDCRQCRCLQEEVDCWPL 734



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>NELL2_MOUSE (Q61220) Protein kinase C-binding protein NELL2 precursor (NEL-like|
           protein 2) (MEL91 protein)
          Length = 816

 Score = 28.5 bits (62), Expect = 5.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 81  GDGWQWACQSTRLLQYLVDCFPL 13
           GD W   C+  R LQ  VDC+PL
Sbjct: 712 GDTWVQDCRQCRCLQGEVDCWPL 734


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,491,288
Number of Sequences: 219361
Number of extensions: 200189
Number of successful extensions: 631
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 80,573,946
effective HSP length: 7
effective length of database: 79,038,419
effective search space used: 1896922056
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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