| Clone Name | rbast24d07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | VSR5_ARATH (O64758) Vacuolar sorting receptor 5 precursor (AtVSR... | 33 | 0.29 | 2 | VSR7_ARATH (Q8L7E3) Vacuolar sorting receptor 7 precursor (AtVSR... | 28 | 7.2 |
|---|
>VSR5_ARATH (O64758) Vacuolar sorting receptor 5 precursor (AtVSR5) (Epidermal| growth factor receptor-like protein 5) (AtELP5) (BP80-like protein e) (AtBP80e) Length = 618 Score = 32.7 bits (73), Expect = 0.29 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%) Frame = -2 Query: 87 CRCPFS*TGSDIKCEQTTLCKEHN--NCDG 4 CRCP G +KCE CKE + CDG Sbjct: 497 CRCPLGFLGDGLKCEDIDECKEKSACKCDG 526
>VSR7_ARATH (Q8L7E3) Vacuolar sorting receptor 7 precursor (AtVSR7) (Epidermal| growth factor receptor-like protein 3) (AtELP3) (BP80-like protein f) (AtBP80f) Length = 625 Score = 28.1 bits (61), Expect = 7.2 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = -2 Query: 87 CRCPFS*TGSDIKCEQTTLCKEHNNC 10 C+CP G + CE CKE + C Sbjct: 499 CKCPEGFQGDGLTCEDINECKERSVC 524 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,750,173 Number of Sequences: 219361 Number of extensions: 147721 Number of successful extensions: 421 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 410 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 421 length of database: 80,573,946 effective HSP length: 11 effective length of database: 78,160,975 effective search space used: 1875863400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)