>NUKC_MESVI (Q9MUR0) NAD(P)H-quinone oxidoreductase chain K, chloroplast (EC|
           1.6.5.-) (NAD(P)H dehydrogenase, chain K)
           (NADH-plastoquinone oxidoreductase subunit K)
          Length = 247

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +2

Query: 41  IYHPLHFTLSPLTGPYLSYSTIQTPPSSLSPA 136
           I H L  +    TG YL+ S  QTPP SLS A
Sbjct: 198 IKHELTLSSPVYTGKYLNSSARQTPPRSLSEA 229

>ALDH2_BACSU (P39616) Probable aldehyde dehydrogenase ywdH (EC 1.2.1.3)|
          Length = 457

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 47  HPLHFTLSPLTGPYLSYSTIQTPPSSLSPAV 139
           +PL   LSPL G   + +T+   PS  +PAV
Sbjct: 117 YPLQLALSPLIGAIAAGNTVVLKPSEYTPAV 147

>BCOR_MOUSE (Q8CGN4) BCoR protein (BCL-6 corepressor)|
          Length = 1759

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 6   TRSERDKEQTEESTTRSISHYPPSLVLIYHTVQYRRPHLPYPR 134
           T S+  K   E S   S +  PP+ + +     +R P +PYPR
Sbjct: 614 TSSKGAKANPEPSFKASENGLPPTSIFLSPNEAFRSPAIPYPR 656

>ATG3_EMENI (Q5AVG2) Autophagy-related protein 3 (Autophagy-related E2-like|
           conjugation enzyme atg3)
          Length = 787

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 25  RSKQRNLPPAPFHIIPPHWSLFIIQYNTDAP 117
           R K +++P +PF ++PP   L I  Y  D P
Sbjct: 515 RFKLQSMPESPFLLLPPELRLQIYSYVLDIP 545

>UL16_VZVD (P09293) Gene 44 protein|
          Length = 363

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 19  VTRSKQRNLPPAPFHII 69
           +TR +Q NLPP  FH+I
Sbjct: 82  ITRPRQMNLPPKTFHVI 98

>RECR_LACLA (Q9CIL6) Recombination protein recR|
          Length = 198

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 35  RGIYHPLHFTLSPLTG 82
           RG+YH LH T+SP+ G
Sbjct: 101 RGLYHVLHGTISPMNG 116

>RECR_DEIRA (Q9ZNA2) Recombination protein recR|
          Length = 220

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 26  GANRGIYHPLHFTLSPLTG 82
           G  RG+YH LH  LSP+ G
Sbjct: 98  GEYRGLYHVLHGVLSPMNG 116


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,812,940
Number of Sequences: 219361
Number of extensions: 366837
Number of successful extensions: 1205
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 80,573,946
effective HSP length: 23
effective length of database: 75,528,643
effective search space used: 1812687432
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)