>CYAA_DICDI (Q03100) Adenylate cyclase, aggregation specific (EC 4.6.1.1) (ATP|
           pyrophosphate-lyase) (Adenylyl cyclase)
          Length = 1407

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +3

Query: 42  GIAGGNSVLPPPKTRVDT*HTHRAGEHNTHPHCLTQPYTTNHSHANN 182
           G  GG   + P    +++   +    HN HP+ L+ P+  NH++ N+
Sbjct: 68  GGGGGGGHINPMHLNLNSITNNHNNHHNHHPNTLSTPHNNNHNNNNH 114

>CNG_ICTPU (P55934) Cyclic nucleotide-gated cation channel|
          Length = 682

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = +1

Query: 73  HRRPGLTHDTHIEQEST-TRTHTA*PNHILPTTHTRTIYSTNKE 201
           H   GL  D   E E     THT    H  P THTRT   TN E
Sbjct: 636 HTGLGLLSDNEAEGEHAGVPTHTHADIHAQPETHTRTSAETNSE 679

>GPI16_SCHPO (O94380) GPI transamidase component PIG-T homolog precursor|
          Length = 545

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 22/74 (29%), Positives = 29/74 (39%)
 Frame = +3

Query: 36  RNGIAGGNSVLPPPKTRVDT*HTHRAGEHNTHPHCLTQPYTTNHSHANNLFH**RKKYPN 215
           RNG   G +   PP       + H   E     HCL   Y+T H   ++LFH    K P 
Sbjct: 247 RNGRRKGKTTFQPPSE-----YCH--DEDMDSLHCLMSGYSTEHHTVDDLFH----KVPK 295

Query: 216 ARTAGHPNRSIIFI 257
            R       S +F+
Sbjct: 296 ERCLLSSTFSDVFV 309

>DHPH_BACBA (Q59224) Phenylalanine dehydrogenase (EC 1.4.1.20) (PheDH)|
          Length = 380

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 106 CVCHVSTLVFGGGSTELPPAIPFLYPLRAMNKL 8
           C+  V     GGG + +P A+  LY ++A NK+
Sbjct: 142 CIVGVPEAYGGGGDSSIPTAMGVLYGIKATNKM 174

>UHPB_SALTY (P27668) Sensor protein uhpB (EC 2.7.13.3)|
          Length = 500

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = -1

Query: 190 WNKLFACEWLVVYGWVRQCGCVLCSPALCVCHVSTLVFGGGSTELPPAIPFLY 32
           W  L   EWL+VY W+ Q         + + H+  L+ G   T LP A+   Y
Sbjct: 60  WPVLLGAEWLLVY-WLAQ--------EVALAHLPLLMIGSVLTLLPVALTSRY 103

>LOZEN_DROME (Q9W349) Protein lozenge|
          Length = 826

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/46 (30%), Positives = 17/46 (36%)
 Frame = +3

Query: 99  HTHRAGEHNTHPHCLTQPYTTNHSHANNLFH**RKKYPNARTAGHP 236
           H H    H+  P+    PY   H HA +  H     YP      HP
Sbjct: 107 HHHHHLHHHYSPYHHAHPYHPPHPHAPHHHHHHHPPYPYPPAGPHP 152

>TMC6_HUMAN (Q7Z403) Transmembrane channel-like protein 6 (Epidermodysplasia|
           verruciformis protein 1) (Protein LAK-4)
          Length = 805

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 162 W*YMVGSGSVGACCALLLYVCVM 94
           W    GSG V +CC  L Y CV+
Sbjct: 189 WRGQPGSGGVCSCCGRLRYACVL 211

>DFD_DROME (P07548) Homeotic protein deformed|
          Length = 586

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 8/74 (10%)
 Frame = +3

Query: 42  GIAGGNSVLPPPKTRVDT*HTHRAGEHNTHPHCLTQPYTTNHSHANNLFH**RK------ 203
           G AGG +  P      D    + A  HN H H  +  ++  H H+N+      +      
Sbjct: 68  GGAGGMTGHPHSMHPADMVSDYMAHHHNPHSHSHSHTHSLPHHHSNSAISGHHQASAGGY 127

Query: 204 --KYPNARTAGHPN 239
              Y NA    HP+
Sbjct: 128 SSNYANATPPSHPH 141

>CAS1A_XENLA (P55865) Caspase-1-A precursor (EC 3.4.22.-) (CASP-1-A)|
           (Interleukin-1 beta convertase homolog A) (xICE-A)
          Length = 386

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 14/61 (22%), Positives = 27/61 (44%)
 Frame = +2

Query: 50  RWQLGAAPTEDQG*HMTHT*SRRAQHAPTLPDPTIYYQPLTREQFIPLIKKEISKRSHCR 229
           R  + + P ED G H     +       + PD   +  P     FI  + +++++ +HC+
Sbjct: 285 RDDVASPPLEDDGLHFVQREADFICFCSSTPDTVSWRDPTKGSVFITHLIEKMNEYAHCQ 344

Query: 230 P 232
           P
Sbjct: 345 P 345

>NOTC4_MOUSE (P31695) Neurogenic locus notch homolog protein 4 precursor (Notch 4)|
            [Contains: Transforming protein Int-3; Notch 4
            extracellular truncation; Notch 4 intracellular domain]
          Length = 1964

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 245  HNFYL*LPSGRPAGRPACACMA 310
            HN  L LPS +P   P CAC++
Sbjct: 1093 HNGGLCLPSPKPGSPPLCACLS 1114

>CAS1B_XENLA (P55867) Caspase-1-B precursor (EC 3.4.22.-) (CASP-1-B)|
           (Interleukin-1 beta convertase homolog B) (xICE-B)
          Length = 382

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/61 (24%), Positives = 27/61 (44%)
 Frame = +2

Query: 50  RWQLGAAPTEDQG*HMTHT*SRRAQHAPTLPDPTIYYQPLTREQFIPLIKKEISKRSHCR 229
           R  +  AP ED   H   T +       + PD   +  P     FI  + +++++ +HC+
Sbjct: 281 RDDVAPAPLEDDAVHHVQTETDSICFYSSTPDTASWRNPTKGSVFIIRLIEKMNELAHCQ 340

Query: 230 P 232
           P
Sbjct: 341 P 341

>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa|
            immediate-early protein)
          Length = 1487

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -2

Query: 291  GRPAGLPEGSYR*KLWSDLGG 229
            G PA  P GS R  LWSDL G
Sbjct: 1106 GLPASRPGGSRREPLWSDLKG 1126

>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa|
            immediate-early protein)
          Length = 1487

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -2

Query: 291  GRPAGLPEGSYR*KLWSDLGG 229
            G PA  P GS R  LWSDL G
Sbjct: 1106 GLPASRPGGSRREPLWSDLKG 1126

>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa|
            immediate-early protein)
          Length = 1487

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -2

Query: 291  GRPAGLPEGSYR*KLWSDLGG 229
            G PA  P GS R  LWSDL G
Sbjct: 1106 GLPASRPGGSRREPLWSDLKG 1126


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,752,411
Number of Sequences: 219361
Number of extensions: 1215592
Number of successful extensions: 3618
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3602
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)