>IRS1_RAT (P35570) Insulin receptor substrate 1 (IRS-1) (pp185)|
          Length = 1235

 Score = 32.0 bits (71), Expect = 0.45
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
 Frame = +2

Query: 26  PTSSTPDPTDHQNTPE--RRADG---TQKRRALPTRLSAGQPAATRSNKVEEERR 175
           P SS   P  H   P   R+ D    T  R A PTRLS G P A+   +V E+++
Sbjct: 820 PESSVTHPHHHALQPHLPRKVDTAAQTNSRLARPTRLSLGDPKASTLPRVREQQQ 874

>IRS1_MOUSE (P35569) Insulin receptor substrate 1 (IRS-1)|
          Length = 1233

 Score = 31.2 bits (69), Expect = 0.77
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
 Frame = +2

Query: 26  PTSSTPDPTDHQNTPE--RRADG---TQKRRALPTRLSAGQPAATRSNKVEEERR 175
           P SS   P  H   P   R+ D    T  R A PTRLS G P A+   +V E+++
Sbjct: 820 PESSLTHPHHHVLQPHLPRKVDTAAQTNSRLARPTRLSLGDPKASTLPRVREQQQ 874

>DHX33_MOUSE (Q80VY9) Putative ATP-dependent RNA helicase DHX33 (EC 3.6.1.-)|
           (DEAH box protein 33)
          Length = 698

 Score = 31.2 bits (69), Expect = 0.77
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = -3

Query: 148 SGGRWLAGGKARRQCPPLLRPVGSPFRRVL 59
           +GG   AGG  RRQ PPL +P  SP+R  L
Sbjct: 30  AGGGGGAGG-GRRQTPPLAQPSASPYREAL 58

>FA5_BOVIN (Q28107) Coagulation factor V precursor (Activated protein C|
            cofactor) [Contains: Coagulation factor V heavy chain;
            Coagulation factor V light chain]
          Length = 2211

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 9/49 (18%)
 Frame = +2

Query: 5    THGQTLAPTSSTPDPTDHQNTPERRADGTQ---------KRRALPTRLS 124
            TH  T AP++ +PDPT     P  R+  TQ         + RA+PT +S
Sbjct: 1127 THSTT-APSNRSPDPTHSTTAPSNRSPPTQPSQIPNYDLRNRAIPTDVS 1174

>DHX33_HUMAN (Q9H6R0) Putative ATP-dependent RNA helicase DHX33 (EC 3.6.1.-)|
           (DEAH box protein 33)
          Length = 707

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = -3

Query: 148 SGGRWLAGGKARRQCPPLLRPVGSPF 71
           SGGR   GG  RRQ PPL +P  SP+
Sbjct: 40  SGGR--GGGGGRRQQPPLAQPSASPY 63

>P53_FELCA (P41685) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 386

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 66  RRKGEPTGRKSGGHCRRAFPPANQRPPDQTK 158
           R+KGEP      G  +RA PP+    P Q K
Sbjct: 283 RKKGEPCPEPPPGSTKRALPPSTSSTPPQKK 313

>MAGI1_MOUSE (Q6RHR9) Membrane-associated guanylate kinase, WW and PDZ|
            domain-containing protein 1 (BAI1-associated protein 1)
            (BAP-1) (Membrane-associated guanylate kinase inverted 1)
            (MAGI-1)
          Length = 1471

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
 Frame = +2

Query: 53   DHQNTPERRADGTQKRRALPT-RLSAGQPAATRSNKVEEERR----GCRHEEARG 202
            D + +PERR  G+ +RRA  T R  A  P   R   +++  R    G R  E  G
Sbjct: 1388 DQRRSPERRRGGSPERRAKSTDRRRARSPERRRERSLDKRNRDDKVGHREREEAG 1442

>UL49_EHV4 (Q00039) Tegument protein (Gene 11 protein)|
          Length = 290

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 2   TTHGQTLAPTSSTPDPTDHQNTPERRADGTQKRRALPTRLSAGQP 136
           T+HG+ L+PT +TP P     TP +R       RA     +  QP
Sbjct: 99  TSHGR-LSPTKTTPHPKSAGVTPPQRVPARPATRAAAPSATPTQP 142

>CWC25_USTMA (Q4P6I3) Pre-mRNA-splicing factor CWC25|
          Length = 520

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = +2

Query: 50  TDHQNTPERRADGTQKRRALPTRLSAGQPAATRSNKVEEERRGCRHEEAR 199
           TD Q+  ERR    +KRR              R ++ E  RRG RH E+R
Sbjct: 262 TDTQSKDERRRSKEEKRR--------------RHDRDEHRRRGSRHGESR 297

>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4 (Hyperpolarization-activated
            cation channel 4) (HAC-4)
          Length = 1175

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
 Frame = +2

Query: 5    THGQTLAPTSSTPDPTDHQNTPERRADGTQKRRALPTRL---SAGQPAATRSNKVEEERR 175
            +HG  L P +S+P P      P+RRA        L   L   SA QPA  +    +  RR
Sbjct: 1029 SHGSLLLPPASSPPPPPPPPAPQRRATPPLAPGRLSQDLKLISASQPALPQDG-AQTLRR 1087

Query: 176  GCRHEEA 196
               H  +
Sbjct: 1088 ASPHSSS 1094

>LSD1_HUMAN (O60341) Lysine-specific histone demethylase 1 (EC 1.-.-.-) (Amine|
           oxidase flavin-containing domain protein 2) (BRAF35-HDAC
           complex protein BHC110)
          Length = 852

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +2

Query: 11  GQTLAPTSSTPDPTDHQNTPERRADGTQKRRALPTR-LSAGQPAATRSNKVEEERRGCRH 187
           G T+ P S+TP  T    TPE R    +KR  +  R +       +      EE R  + 
Sbjct: 86  GPTVVPGSATPMETGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERNAKA 145

Query: 188 EEAR 199
           E+ +
Sbjct: 146 EKEK 149

>P53_CANFA (Q29537) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 381

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 69  RKGEPTGRKSGGHCRRAFPPANQRPPDQTK 158
           +KGEP      G  +RA PP+    P Q K
Sbjct: 279 KKGEPCPEPPPGSTKRALPPSTSSSPPQKK 308

>BCAS1_MOUSE (Q80YN3) Breast carcinoma amplified sequence 1 homolog (Novel|
           amplified in breast cancer 1 homolog)
          Length = 633

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +2

Query: 5   THGQTLAPTSSTPDPTDHQNTPERRADGTQKRRALPTRLSAGQ 133
           T G+T A  S +P P   + T E R  G  K +A PT L  G+
Sbjct: 379 TRGKTKATKSCSPPPPPSEPTSEGRDSG--KEKAGPTSLPLGK 419

>JHD2C_HUMAN (Q15652) Probable JmjC domain-containing histone demethylation|
            protein 2C (EC 1.14.11.-) (Jumonji domain-containing
            protein 1C) (Thyroid receptor-interacting protein 8)
            (TRIP-8)
          Length = 2540

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 35   STPDPTDHQNTPERRADGTQKRRALPTRLSAGQP 136
            ++P P  HQ TP   ADG      +P R S+ +P
Sbjct: 899  NSPSPWLHQPTPVTSADGIGLLSHIPVRPSSAEP 932

>DHBF_BACSU (P45745) Dimodular nonribosomal peptide synthetase|
          Length = 2378

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 140  PLVGRRKGASAMPAAFASRRLAFPACFDGP 51
            P + R +    +P +FA RRL F  C +GP
Sbjct: 1040 PALQRAERPEKIPLSFAQRRLWFLHCLEGP 1069

>TNAA_RHOCA (O30971) Tryptophanase (EC 4.1.99.1) (L-tryptophan indole-lyase)|
           (TNase)
          Length = 454

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 155 CLIGWPLVGRRKGASAMPAAFASRRLAFP 69
           C IG  + GR+   S  PAA    RLAFP
Sbjct: 378 CEIGTAMFGRQPDGSEKPAAMDLVRLAFP 406

>JHD2C_MOUSE (Q69ZK6) Probable JmjC domain-containing histone demethylation|
           protein 2C (EC 1.14.11.-) (Jumonji domain-containing
           protein 1C)
          Length = 2350

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 35  STPDPTDHQNTPERRADGTQKRRALPTRLSAGQP 136
           ++P P  HQ TP   ADG      +P R S+ +P
Sbjct: 718 NSPSPWLHQPTPVTSADGIGLLSHIPVRPSSAEP 751

>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9|
          Length = 3178

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +2

Query: 2   TTHGQTLAPTSSTPDPTDHQNTPERRADGTQKRRALPTRLSAGQPAATRSNKVE 163
           T    T AP++ST  P+   +TP   A  +    A  T+ S     ++ + K E
Sbjct: 488 TVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTKSE 541


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,993,698
Number of Sequences: 219361
Number of extensions: 556522
Number of successful extensions: 2305
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2294
length of database: 80,573,946
effective HSP length: 44
effective length of database: 70,922,062
effective search space used: 1702129488
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)