ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast24c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL163528.8|HS109K15 Homo sapiens chromosome 9 BAC RP11-109K1... 42 0.23
2emb|AL133378.16| Human DNA sequence from clone RP1-91B17 on chro... 40 0.92
3gb|AC090022.12| Homo sapiens 12 BAC RP11-154D9 (Roswell Park Can... 40 0.92
4gb|AC122687.2| Homo sapiens 12 BAC RP13-501J24 (Roswell Park Can... 40 0.92
5gb|AC124943.4| Homo sapiens 12 BAC RP11-20E24 (Roswell Park Canc... 40 0.92
6gb|AC115905.8| Mus musculus chromosome 1, clone RP24-472N17, com... 38 3.6
7gb|AC087434.3| Pan troglodytes clone RP43-90F9, complete sequence 38 3.6
8gb|AC115829.7| Mus musculus chromosome 5, clone RP24-93O11, comp... 38 3.6
9gb|AC161060.6| Mus musculus BAC clone RP23-69N10 from chromosome... 38 3.6
10gb|AC101713.7| Mus musculus chromosome 15, clone RP23-282L9, com... 38 3.6
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 3.6
12gb|AC005081.3| Homo sapiens BAC clone CTA-270D13 from 7, complet... 38 3.6
13gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genom... 38 3.6
14gb|AC125529.4| Mus musculus BAC clone RP23-366O3 from chromosome... 38 3.6
15gb|AC123863.4| Mus musculus BAC clone RP23-364A19 from chromosom... 38 3.6
16gb|AC137948.12| Mus musculus chromosome 1, clone RP23-393D20, co... 38 3.6
17gb|AC128662.4| Mus musculus BAC clone RP24-440E3 from chromosome... 38 3.6
18gb|AC122799.4| Mus musculus BAC clone RP23-308K11 from 16, compl... 38 3.6
19gb|AC104872.8| Mus musculus chromosome 12, clone RP23-360C2, com... 38 3.6
20gb|AC107842.13| Mus musculus chromosome 1, clone RP23-304O9, com... 38 3.6
21gb|AC158924.6| Mus musculus chromosome 18, clone RP23-109P21, co... 38 3.6
22gb|AC144823.2| Danio rerio clone CH211-150P19, complete sequence 38 3.6
23gb|AC144828.2| Danio rerio clone CH211-201D21, complete sequence 38 3.6
24emb|AL513543.14| Human DNA sequence from clone RP11-343J24 on ch... 38 3.6
25emb|AL359714.18| Human DNA sequence from clone RP11-22A15 on chr... 38 3.6
26gb|AC022773.17| Mus musculus chromosome X, clone RP23-157B8, com... 38 3.6
27emb|AL139405.11| Human DNA sequence from clone RP11-393E10 on ch... 38 3.6
28emb|AL604022.21| Mouse DNA sequence from clone RP23-449P23 on ch... 38 3.6
29emb|AJ400821.1|CRU400821 Capsella rubella ORF1, ORF2, ORF3, ORF4... 38 3.6
30emb|CR931794.3| Mouse DNA sequence from clone RP23-470B20 on chr... 38 3.6
31gb|AC116992.2| Homo sapiens chromosome 3 clone RP11-668D4, compl... 38 3.6
32gb|AC069025.5| Homo sapiens chromosome 10 clone RP11-526G5, comp... 38 3.6
33gb|AC092038.3| Homo sapiens chromosome 3 clone RP11-89F18, compl... 38 3.6
34gb|AC179924.2| Mus musculus BAC clone RP23-270O20 from chromosom... 38 3.6
35dbj|AK047734.1| Mus musculus adult male corpus striatum cDNA, RI... 38 3.6
36dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 3.6
37gb|AC150255.7| Aedes aegypti, clone XX-85K2, complete sequence 38 3.6
38gb|AF045555.1|AF045555 Homo sapiens wbscr1 (WBSCR1) and wbscr5 (... 38 3.6
39gb|AC079967.7| Homo sapiens chromosome 8, clone RP11-1058B10, co... 38 3.6
40emb|BX119910.7| Zebrafish DNA sequence from clone DKEY-17C10 in ... 38 3.6
41gb|AC102242.10| Mus musculus chromosome 1, clone RP24-141F9, com... 38 3.6
42emb|BX000484.12| Zebrafish DNA sequence from clone CH211-12E1 in... 38 3.6
43dbj|AB025602.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 38 3.6
44emb|AL807737.12| Mouse DNA sequence from clone RP23-386N10 on ch... 38 3.6
45emb|AL772152.16| Mouse DNA sequence from clone RP23-157O1 on chr... 38 3.6
46emb|CT030697.6| Mouse DNA sequence from clone RP23-274A4 on chro... 38 3.6
47emb|AL807234.6| Mouse DNA sequence from clone RP23-293E12 on chr... 38 3.6
48emb|AL731832.13| Mouse DNA sequence from clone RP23-180N10 on ch... 38 3.6
49emb|AL807763.7| Mouse DNA sequence from clone RP23-28B24 on chro... 38 3.6 
>emb|AL163528.8|HS109K15 Homo sapiens chromosome 9 BAC RP11-109K15, complete sequence
          Length = 184517

 Score = 42.1 bits (21), Expect = 0.23
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 55    gtcttgcataccacaaaacat 75
             |||||||||||||||||||||
Sbjct: 78487 gtcttgcataccacaaaacat 78507
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>emb|AL133378.16| Human DNA sequence from clone RP1-91B17 on chromosome 6q13-14.3
             Contains part of the BAI3 gene for brain-specific
             angiogenesis inhibitor 3, complete sequence
          Length = 113826

 Score = 40.1 bits (20), Expect = 0.92
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    aataattttaagtacatagt 46
             ||||||||||||||||||||
Sbjct: 96361 aataattttaagtacatagt 96342
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>gb|AC090022.12| Homo sapiens 12 BAC RP11-154D9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 126469

 Score = 40.1 bits (20), Expect = 0.92
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    taataattttaagtacatag 45
             ||||||||||||||||||||
Sbjct: 64745 taataattttaagtacatag 64764
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>gb|AC122687.2| Homo sapiens 12 BAC RP13-501J24 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 141411

 Score = 40.1 bits (20), Expect = 0.92
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 31   attttaagtacatagtttga 50
            ||||||||||||||||||||
Sbjct: 1854 attttaagtacatagtttga 1873
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>gb|AC124943.4| Homo sapiens 12 BAC RP11-20E24 (Roswell Park Cancer Institute Human
           BAC Library) complete sequence
          Length = 47466

 Score = 40.1 bits (20), Expect = 0.92
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  attttaagtacatagtttga 50
           ||||||||||||||||||||
Sbjct: 148 attttaagtacatagtttga 129
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>gb|AC115905.8| Mus musculus chromosome 1, clone RP24-472N17, complete sequence
          Length = 173914

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    cacaaaacataacagaata 84
             |||||||||||||||||||
Sbjct: 37283 cacaaaacataacagaata 37265
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>gb|AC087434.3| Pan troglodytes clone RP43-90F9, complete sequence
          Length = 161716

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 28     ataattttaagtacatagt 46
              |||||||||||||||||||
Sbjct: 122823 ataattttaagtacatagt 122805
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>gb|AC115829.7| Mus musculus chromosome 5, clone RP24-93O11, complete sequence
          Length = 128875

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 66     cacaaaacataacagaata 84
              |||||||||||||||||||
Sbjct: 110860 cacaaaacataacagaata 110878
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>gb|AC161060.6| Mus musculus BAC clone RP23-69N10 from chromosome 6, complete sequence
          Length = 222363

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     cacaaaacataacagaata 84
              |||||||||||||||||||
Sbjct: 199049 cacaaaacataacagaata 199031
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>gb|AC101713.7| Mus musculus chromosome 15, clone RP23-282L9, complete sequence
          Length = 189145

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 66    cacaaaacataacagaata 84
             |||||||||||||||||||
Sbjct: 77631 cacaaaacataacagaata 77649
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 64       accacaaaacataacagaa 82
                |||||||||||||||||||
Sbjct: 28012488 accacaaaacataacagaa 28012470
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>gb|AC005081.3| Homo sapiens BAC clone CTA-270D13 from 7, complete sequence
          Length = 180290

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     ataattttaagtacatagt 46
              |||||||||||||||||||
Sbjct: 174068 ataattttaagtacatagt 174086
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>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete
             sequence
          Length = 133889

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    accacaaaacataacagaa 82
             |||||||||||||||||||
Sbjct: 12538 accacaaaacataacagaa 12556
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>gb|AC125529.4| Mus musculus BAC clone RP23-366O3 from chromosome 17, complete sequence
          Length = 215469

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    cacaaaacataacagaata 84
             |||||||||||||||||||
Sbjct: 98522 cacaaaacataacagaata 98504
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>gb|AC123863.4| Mus musculus BAC clone RP23-364A19 from chromosome 5, complete sequence
          Length = 218179

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 61     cataccacaaaacataacagaat 83
              |||||||||||||| ||||||||
Sbjct: 125447 cataccacaaaacacaacagaat 125469
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>gb|AC137948.12| Mus musculus chromosome 1, clone RP23-393D20, complete sequence
          Length = 233077

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 66    cacaaaacataacagaata 84
             |||||||||||||||||||
Sbjct: 33125 cacaaaacataacagaata 33143
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>gb|AC128662.4| Mus musculus BAC clone RP24-440E3 from chromosome 6, complete sequence
          Length = 134729

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     cacaaaacataacagaata 84
              |||||||||||||||||||
Sbjct: 102797 cacaaaacataacagaata 102779
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>gb|AC122799.4| Mus musculus BAC clone RP23-308K11 from 16, complete sequence
          Length = 203686

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    cacaaaacataacagaata 84
             |||||||||||||||||||
Sbjct: 33405 cacaaaacataacagaata 33387
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>gb|AC104872.8| Mus musculus chromosome 12, clone RP23-360C2, complete sequence
          Length = 196850

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    cacaaaacataacagaata 84
             |||||||||||||||||||
Sbjct: 85152 cacaaaacataacagaata 85134
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>gb|AC107842.13| Mus musculus chromosome 1, clone RP23-304O9, complete sequence
          Length = 215781

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    cacaaaacataacagaata 84
             |||||||||||||||||||
Sbjct: 56945 cacaaaacataacagaata 56927
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>gb|AC158924.6| Mus musculus chromosome 18, clone RP23-109P21, complete sequence
          Length = 254968

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 62     ataccacaaaacataacag 80
              |||||||||||||||||||
Sbjct: 142559 ataccacaaaacataacag 142577
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>gb|AC144823.2| Danio rerio clone CH211-150P19, complete sequence
          Length = 159419

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 30     aattttaagtacatagttt 48
              |||||||||||||||||||
Sbjct: 130614 aattttaagtacatagttt 130632
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>gb|AC144828.2| Danio rerio clone CH211-201D21, complete sequence
          Length = 187958

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 30   aattttaagtacatagttt 48
            |||||||||||||||||||
Sbjct: 1579 aattttaagtacatagttt 1597
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>emb|AL513543.14| Human DNA sequence from clone RP11-343J24 on chromosome 1 Contains part
             of the CHRM3 gene for cholinergic receptor muscarinic 3
             and a novel gene (DKFZp667K2218), complete sequence
          Length = 90907

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    catagtttgaccgtgtctt 59
             |||||||||||||||||||
Sbjct: 51171 catagtttgaccgtgtctt 51189
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>emb|AL359714.18| Human DNA sequence from clone RP11-22A15 on chromosome 6 Contains part
             of the BAI3 gene for brain-specific angiogenesis inhibitor
             3, complete sequence
          Length = 156129

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 30    aattttaagtacatagttt 48
             |||||||||||||||||||
Sbjct: 46607 aattttaagtacatagttt 46589
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>gb|AC022773.17| Mus musculus chromosome X, clone RP23-157B8, complete sequence
          Length = 212031

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    cacaaaacataacagaata 84
             |||||||||||||||||||
Sbjct: 86136 cacaaaacataacagaata 86118
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>emb|AL139405.11| Human DNA sequence from clone RP11-393E10 on chromosome 10 Contains
            the 5' end of a variant of the gene for a novel protein
            (FLJ10210) and the 3' end of the gene for a novel protein
            (MGC11034), complete sequence
          Length = 179829

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 26   taataattttaagtacata 44
            |||||||||||||||||||
Sbjct: 3097 taataattttaagtacata 3079
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>emb|AL604022.21| Mouse DNA sequence from clone RP23-449P23 on chromosome 11 Contains the
             3' end of a novel gene (4732452J19Rik), the Supt4h gene
             for suppressor of Ty 4 homolog (S. cerevisiae), a novel
             gene (A430104N18Rik), the Bzrap1 gene for benzodiazapine
             receptor associated protein 1, the Mpo gene for
             myeloperoxidase, a novel gene, the 3' end of the Lpo gene
             for lactoperoxidase and a CpG island, complete sequence
          Length = 92337

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    cacaaaacataacagaata 84
             |||||||||||||||||||
Sbjct: 69404 cacaaaacataacagaata 69386
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>emb|AJ400821.1|CRU400821 Capsella rubella ORF1, ORF2, ORF3, ORF4, ORF5 and ORF6 (partial)
          Length = 26241

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 20    tcccaataataattttaagtaca 42
             ||||||||||||||| |||||||
Sbjct: 12227 tcccaataataatttaaagtaca 12205
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>emb|CR931794.3| Mouse DNA sequence from clone RP23-470B20 on chromosome 4, complete
             sequence
          Length = 34740

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    cacaaaacataacagaata 84
             |||||||||||||||||||
Sbjct: 18948 cacaaaacataacagaata 18930
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>gb|AC116992.2| Homo sapiens chromosome 3 clone RP11-668D4, complete sequence
          Length = 204162

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    taataattttaagtacata 44
             |||||||||||||||||||
Sbjct: 84850 taataattttaagtacata 84868
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>gb|AC069025.5| Homo sapiens chromosome 10 clone RP11-526G5, complete sequence
          Length = 211583

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    taataattttaagtacata 44
             |||||||||||||||||||
Sbjct: 10845 taataattttaagtacata 10863
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>gb|AC092038.3| Homo sapiens chromosome 3 clone RP11-89F18, complete sequence
          Length = 170948

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 26     taataattttaagtacata 44
              |||||||||||||||||||
Sbjct: 151540 taataattttaagtacata 151558
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>gb|AC179924.2| Mus musculus BAC clone RP23-270O20 from chromosome 12, complete
             sequence
          Length = 217229

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 66    cacaaaacataacagaata 84
             |||||||||||||||||||
Sbjct: 72672 cacaaaacataacagaata 72690
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>dbj|AK047734.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length
           enriched library, clone:C030018L17 product:REGULATOR OF
           G-PROTEIN SIGNALING 20 (RGS20) (REGULATOR OF G-PROTEIN
           SIGNALING Z1) homolog [Mus musculus], full insert
           sequence
          Length = 1532

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 31  attttaagtacatagtttg 49
           |||||||||||||||||||
Sbjct: 757 attttaagtacatagtttg 739
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 64       accacaaaacataacagaa 82
                |||||||||||||||||||
Sbjct: 28103812 accacaaaacataacagaa 28103794
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>gb|AC150255.7| Aedes aegypti, clone XX-85K2, complete sequence
          Length = 164368

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 23   caataataattttaagtac 41
            |||||||||||||||||||
Sbjct: 6531 caataataattttaagtac 6513
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>gb|AF045555.1|AF045555 Homo sapiens wbscr1 (WBSCR1) and wbscr5 (WBSCR5) genes, complete cds,
             alternatively spliced and replication factor C subunit 2
             (RFC2) gene, complete cds
          Length = 90082

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    ataattttaagtacatagt 46
             |||||||||||||||||||
Sbjct: 28914 ataattttaagtacatagt 28896
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>gb|AC079967.7| Homo sapiens chromosome 8, clone RP11-1058B10, complete sequence
          Length = 169865

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 19     atcccaataataattttaa 37
              |||||||||||||||||||
Sbjct: 118117 atcccaataataattttaa 118135
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>emb|BX119910.7| Zebrafish DNA sequence from clone DKEY-17C10 in linkage group 10,
              complete sequence
          Length = 199662

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 30     aattttaagtacatagttt 48
              |||||||||||||||||||
Sbjct: 165461 aattttaagtacatagttt 165443
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>gb|AC102242.10| Mus musculus chromosome 1, clone RP24-141F9, complete sequence
          Length = 146925

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 31   attttaagtacatagtttg 49
            |||||||||||||||||||
Sbjct: 9410 attttaagtacatagtttg 9428
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>emb|BX000484.12| Zebrafish DNA sequence from clone CH211-12E1 in linkage group 2,
            complete sequence
          Length = 158932

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 24   aataataattttaagtacatagt 46
            |||||||||||||| ||||||||
Sbjct: 7584 aataataattttaaatacatagt 7562
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>dbj|AB025602.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F14A1
          Length = 55790

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 24    aataataattttaagtaca 42
             |||||||||||||||||||
Sbjct: 27900 aataataattttaagtaca 27882
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>emb|AL807737.12| Mouse DNA sequence from clone RP23-386N10 on chromosome 4, complete
             sequence
          Length = 84442

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 66    cacaaaacataacagaata 84
             |||||||||||||||||||
Sbjct: 10093 cacaaaacataacagaata 10111
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>emb|AL772152.16| Mouse DNA sequence from clone RP23-157O1 on chromosome 4, complete
              sequence
          Length = 195937

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 66     cacaaaacataacagaata 84
              |||||||||||||||||||
Sbjct: 186236 cacaaaacataacagaata 186254
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>emb|CT030697.6| Mouse DNA sequence from clone RP23-274A4 on chromosome 12, complete
              sequence
          Length = 198527

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 66     cacaaaacataacagaata 84
              |||||||||||||||||||
Sbjct: 164054 cacaaaacataacagaata 164072
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>emb|AL807234.6| Mouse DNA sequence from clone RP23-293E12 on chromosome 4, complete
             sequence
          Length = 226546

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 58    ttgcataccacaaaacata 76
             |||||||||||||||||||
Sbjct: 75834 ttgcataccacaaaacata 75852
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>emb|AL731832.13| Mouse DNA sequence from clone RP23-180N10 on chromosome X, complete
              sequence
          Length = 144400

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     cacaaaacataacagaata 84
              |||||||||||||||||||
Sbjct: 105375 cacaaaacataacagaata 105357
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>emb|AL807763.7| Mouse DNA sequence from clone RP23-28B24 on chromosome 4, complete
              sequence
          Length = 219463

 Score = 38.2 bits (19), Expect = 3.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     cacaaaacataacagaata 84
              |||||||||||||||||||
Sbjct: 106718 cacaaaacataacagaata 106700


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 987,000
Number of Sequences: 3902068
Number of extensions: 987000
Number of successful extensions: 85117
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84962
Number of HSP's gapped (non-prelim): 155
length of query: 86
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 65
effective length of database: 17,151,101,840
effective search space: 1114821619600
effective search space used: 1114821619600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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