| Clone Name | rbast24b08 |
|---|---|
| Clone Library Name | barley_pub |
>SPEE_STRR6 (P66836) Spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 286 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/20 (65%), Positives = 14/20 (70%) Frame = -3 Query: 91 LFTEVFTENHHVGTSMLP*Y 32 LFTE +T N HVG MLP Y Sbjct: 255 LFTEYYTANLHVGAFMLPKY 274
>SPEE_STRPN (P66835) Spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 286 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/20 (65%), Positives = 14/20 (70%) Frame = -3 Query: 91 LFTEVFTENHHVGTSMLP*Y 32 LFTE +T N HVG MLP Y Sbjct: 255 LFTEYYTANLHVGAFMLPKY 274
>P3_HUMAN (P09131) P3 protein (Solute carrier family 10 member 3)| Length = 477 Score = 28.5 bits (62), Expect = 4.1 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Frame = +2 Query: 95 LVVDVESYSTRQQVDIVGNTGWRRPKPML----LLYKLPWHALSYYSLPRCTAKSHQLPP 262 +V+ + S++Q + G G P ML LL LPW A S TA H +PP Sbjct: 1 MVLMQDKGSSQQWPGLGGEGGGTGPLSMLRAALLLISLPWGAQGTASTSLSTAGGHTVPP 60
>O5AS1_HUMAN (Q8N127) Olfactory receptor 5AS1| Length = 324 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +2 Query: 23 FKLVSWEHRSSHVVVFRKYFCKQVLVVDVESYSTRQQ 133 F L S+ S+ VV+F YFC + V+ ++S R + Sbjct: 200 FALCSFIQTSTFVVIFISYFCILITVLSIKSSGGRSK 236
>LYS_ANTMY (Q7SID7) Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)| Length = 120 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 5/38 (13%) Frame = -1 Query: 135 TCCLVLYDSTSTTSTCLQKYLRKT-----TTWELRCSH 37 TC +L D + STC +K ++T + W+ C+H Sbjct: 75 TCSQLLTDDITVASTCAKKIYKRTKFDAWSGWDNHCNH 112
>MPS1_YEAST (P54199) Serine/threonine-protein kinase MPS1 (EC 2.7.12.2)| (Regulatory cell proliferation kinase 1) Length = 764 Score = 27.3 bits (59), Expect = 9.2 Identities = 9/15 (60%), Positives = 13/15 (86%) Frame = -2 Query: 92 LVYRSIYGKPPRGNF 48 ++Y+ IYGKPP G+F Sbjct: 643 IIYQMIYGKPPYGSF 657 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,934,932 Number of Sequences: 219361 Number of extensions: 898976 Number of successful extensions: 1850 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1822 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1850 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)