>COOS_METKA (Q8TXX3) Carbon monoxide dehydrogenase (EC 1.2.99.2) (CODH)|
          Length = 638

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +2

Query: 32  LIFCSKQRAENEVQRSGQKYISALIERVSKHENFELSPINR 154
           LI    +RAE   + + Q+ I A  ER SKHE+  + P +R
Sbjct: 373 LILWDPERAEEVAEEAVQRAIEAFKERRSKHEDKIMEPKHR 413

>CDC62_SULAC (Q4JAB4) Cell division control protein 6 homolog 2 (CDC6 homolog 2)|
          Length = 415

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 194 KYMNKEENFNIKPGMWSRRKTVVVYYVQRSTLLAPLSVITSGRSRNTATSILKL 355
           +Y+   +NF  +P    RR T +  YV+R  L+  ++   SGR     T+++ L
Sbjct: 340 RYVELSKNFGEEP----RRHTQIFEYVRRMKLMGLINTRQSGRGMRGRTTLVSL 389

>SLUG_XENLA (Q91924) Snail protein homolog Slug (xSlu protein)|
          Length = 266

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 19/65 (29%), Positives = 24/65 (36%)
 Frame = +1

Query: 142 PYKPERRKCISSN*SPSKIHEQRRKF*YKTRHVVPKENSGCLLCTAEYIACSAFCHHKWK 321
           P      K  S + SP    E+R +      H +  E   C LC+  Y   S    HK  
Sbjct: 88  PQSDTSSKDHSGSESPISDEEERLQTKLSDSHAIEAEKFQCSLCSKTYSTFSGLAKHK-- 145

Query: 322 EQKHC 336
            Q HC
Sbjct: 146 -QLHC 149

>PUR2_THETN (Q8RC54) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS)|
           (Glycinamide ribonucleotide synthetase)
           (Phosphoribosylglycinamide synthetase)
          Length = 417

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +2

Query: 158 GGSVSLATNPH--PKYMNKEENFNIKPGMWSRRKTVVVYYVQRSTLLAPLSVITSG 319
           GG  S+A NPH   K +N+ E   +KP +++ +K  +VY   +  L A L +   G
Sbjct: 226 GGMGSIAPNPHIDKKTLNEIEEKILKPVVYALKKEGIVY---KGVLYAGLMLTKEG 278

>NU6C_SYNY3 (P26523) NAD(P)H-quinone oxidoreductase chain 6 (EC 1.6.5.-)|
           (NAD(P)H dehydrogenase I, chain 6) (NDH-1, chain 6)
          Length = 198

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
 Frame = +2

Query: 200 MNKEENFNIKPGMWSRRKTVVVYYVQRSTLLAPLSVITSGR-------SRNTATSILK-L 355
           +NK E+F+  PG W R  +  +       LL+ + +IT  +         NT  +I K  
Sbjct: 81  VNKREDFSKIPGRWLRNVSTALVCTGIFALLSTMVLITPWQINETGPFVENTLVTIGKHF 140

Query: 356 LSDYLLSTHMRS 391
            SDYLL   + S
Sbjct: 141 FSDYLLPFELAS 152

>TOP6B_AERPE (Q9YE64) Type II DNA topoisomerase VI subunit B (EC 5.99.1.3)|
           (TopoVI-B)
          Length = 565

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +2

Query: 233 GMWSRRKTVVVYYVQRSTLLAPLSVI 310
           G WSR K+ ++ Y++R+ ++AP + I
Sbjct: 201 GDWSRAKSKILEYIKRTAVIAPYAEI 226

>SLUG_HUMAN (O43623) Zinc finger protein SLUG (Neural crest transcription|
           factor Slug) (Snail homolog 2)
          Length = 268

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/55 (30%), Positives = 21/55 (38%)
 Frame = +1

Query: 172 SSN*SPSKIHEQRRKF*YKTRHVVPKENSGCLLCTAEYIACSAFCHHKWKEQKHC 336
           S + SP    E+R +      H +  E   C LC   Y   S    HK   Q HC
Sbjct: 100 SGSESPISDEEERLQSKLSDPHAIEAEKFQCNLCNKTYSTFSGLAKHK---QLHC 151

>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 71  QRSGQKYISALIERVSKHENFELSPINRKGG 163
           + +G KYI   IE++SK   + +   + KGG
Sbjct: 262 EENGLKYIEEAIEKLSKRHQYHIRAYDPKGG 292

>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 373

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 71  QRSGQKYISALIERVSKHENFELSPINRKGG 163
           + +G KYI   IE++SK   + +   + KGG
Sbjct: 263 EENGLKYIEEAIEKLSKRHQYHIRAYDPKGG 293

>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 71  QRSGQKYISALIERVSKHENFELSPINRKGG 163
           + +G KYI   IE++SK   + +   + KGG
Sbjct: 262 EENGLKYIEEAIEKLSKRHQYHIRAYDPKGG 292

>GLNA_BOVIN (P15103) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS) (Fragment)
          Length = 172

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 71  QRSGQKYISALIERVSKHENFELSPINRKGG 163
           + +G KYI   IE++SK   + +   + KGG
Sbjct: 62  EENGLKYIEEAIEKLSKRHQYHIRAYDPKGG 92

>RR7_SPIMX (P42342) Chloroplast 30S ribosomal protein S7|
          Length = 155

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
 Frame = +2

Query: 146 INRKGGSVSLATNPHPKYMNKEENF-------NIKPGMWSRRKTVVVYYVQRSTLLAPLS 304
           ++R+  +VS  T P P Y N+  N        N K  +  R     +  +++ T   PLS
Sbjct: 1   MSRRSNTVSRPTKPDPIYRNRLVNMLVNRILKNGKKSLGYRILYTALKTIKQKTKKNPLS 60

Query: 305 VITSGRSRNTATSILK 352
           V+     R T   ++K
Sbjct: 61  VLRQAVRRATPNVVVK 76

>MTA1_HUMAN (Q13330) Metastasis-associated protein MTA1|
          Length = 715

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
 Frame = -3

Query: 349 KYASGSVSAPSTCDDRKRSKQCTPLYIVDNH-----CFPSGPHA 233
           K A+G+V A   C  R+R    T + + D H     C+ +GP A
Sbjct: 32  KTANGNVEAKVVCFYRRRDISSTLIALADKHATLSVCYKAGPGA 75

>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 71  QRSGQKYISALIERVSKHENFELSPINRKGG 163
           + +G KYI   IE++SK   + +   + KGG
Sbjct: 262 EENGLKYIEESIEKLSKRHQYHIRAYDPKGG 292

>BAM_DROME (P22745) Protein bag-of-marbles|
          Length = 442

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 104 IERVSKHENFELSPINRKGGSVSLATNPHPKYMNKEENFNIK 229
           I++ S+H  F+ SP  +      L T P  K + KE  +N K
Sbjct: 93  IQKRSRHFAFDGSPAKKSRSGGVLVTGPKQKQLQKENVWNRK 134

>KPYK_METEX (O05118) Pyruvate kinase (EC 2.7.1.40) (PK)|
          Length = 483

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/59 (27%), Positives = 32/59 (54%)
 Frame = +2

Query: 149 NRKGGSVSLATNPHPKYMNKEENFNIKPGMWSRRKTVVVYYVQRSTLLAPLSVITSGRS 325
           NRKG S+     P P  M +++  +++ G+ +    + V +VQR   +A +  + +GR+
Sbjct: 160 NRKGVSLPHTALPVPA-MTEKDRGDLEAGLAAGADWIAVSFVQRPEDVAEVKKVAAGRA 217


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,558,925
Number of Sequences: 219361
Number of extensions: 1121674
Number of successful extensions: 2492
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2492
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)