ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast23f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156... 50 0.006
2gb|AC124497.3| Mus musculus BAC clone RP23-480E8 from chromosome... 48 0.022
3gb|AC025028.21| Homo sapiens 3 BAC RP11-238M12 (Roswell Park Can... 48 0.022
4gb|AC154319.2| Mus musculus BAC clone RP23-331I13 from chromosom... 44 0.34
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
6dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
7dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
8gb|AC163623.5| Mus musculus BAC clone RP23-123D6 from chromosome... 42 1.4
9gb|AC122244.5| Mus musculus BAC clone RP23-149I9 from chromosome... 42 1.4
10emb|CR450766.5| Zebrafish DNA sequence from clone DKEY-192C10 in... 42 1.4
11gb|AC139296.4| Mus musculus BAC clone RP24-131C5 from chromosome... 42 1.4
12gb|AC110090.6| Mus musculus BAC clone RP23-27L4 from chromosome ... 42 1.4
13ref|XM_675306.1| Plasmodium berghei strain ANKA hypothetical pro... 42 1.4
14gb|U91841.2|BFU91841 Bacillus pseudofirmus catabolite control pr... 42 1.4
15gb|AC116320.5| Mus musculus chromosome 18 clone RP23-269B16, com... 42 1.4
16emb|AL117325.3|HSDA79C13 Human DNA sequence from clone RP6-79C13... 42 1.4
17emb|AL031289.1|HS739H11 Human DNA sequence from clone RP4-739H11... 42 1.4
18gb|AC105245.4| Homo sapiens chromosome 18, clone CTD-2515C13, co... 42 1.4
19gb|AC090349.7| Homo sapiens chromosome 18, clone RP11-844N22, co... 42 1.4
20gb|AC157363.6| Mus musculus chromosome 1, clone RP23-478L14, com... 42 1.4
21emb|AL732501.8| Mouse DNA sequence from clone RP23-325I22 on chr... 42 1.4
22gb|U28932.1|MMU28932 Mus musculus smooth muscle calponin gene, c... 42 1.4
23gb|AC005303.1|AC005303 Homo sapiens chromosome 17, clone hRPK.48... 42 1.4
24gb|L49022.1|MUSH1CA Mus musculus h1-calponin alpha and beta gene... 42 1.4
25gb|AC170422.1| Rhesus Macaque BAC CH250-106F22 (Children's Hosp... 40 5.3
26gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
27gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
28gb|AC147069.2| Pan troglodytes BAC clone RP43-165H20 from 7, com... 40 5.3
29gb|DP000008.1| Bos taurus target 1 genomic scaffold 40 5.3
30gb|AF532975.1| Oryza sativa (indica cultivar-group) IR24 chromos... 40 5.3
31emb|Z81565.1|CEK06G5 Caenorhabditis elegans Cosmid K06G5, comple... 40 5.3
32gb|AC129319.4| Mus musculus BAC clone RP24-127J16 from chromosom... 40 5.3
33gb|AC129313.4| Mus musculus BAC clone RP23-342K4 from chromosome... 40 5.3
34emb|AL603765.6| Human DNA sequence from clone RP11-351G1 on chro... 40 5.3
35emb|AL357932.15| Human DNA sequence from clone RP11-435N12 on ch... 40 5.3
36gb|AC105910.10| Homo sapiens chromosome 8, clone CTD-2036J7, com... 40 5.3
37gb|AC121333.5| Homo sapiens 3 BAC RP11-691G17 (Roswell Park Canc... 40 5.3
38gb|AC015528.14| Homo sapiens chromosome 8, clone RP11-179A23, co... 40 5.3
39gb|AC087692.7| Homo sapiens chromosome 8, clone RP11-67D13, comp... 40 5.3
40emb|CR318632.9| Zebrafish DNA sequence from clone CH211-113N10 i... 40 5.3
41gb|AC026991.9| Homo sapiens, clone RP11-279L11, complete sequence 40 5.3
42gb|AC161147.6| Mus musculus BAC clone RP23-357G12 from chromosom... 40 5.3
43emb|BX248517.10| Zebrafish DNA sequence from clone DKEY-30O16 in... 40 5.3
44gb|AF234648.1|AF234648 Triticum aestivum clone G6 gamma-gliadin ... 40 5.3
45dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
46gb|AC018644.6|AC018644 Homo sapiens chromosome 7 clone RP11-383F... 40 5.3
47gb|AC025290.3|F9P14 Sequence of BAC F9P14 from Arabidopsis thali... 40 5.3
48dbj|AK105734.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
49gb|AC146966.3| Bos taurus clone RP42-139G14, complete sequence 40 5.3
50emb|BX649263.6| Zebrafish DNA sequence from clone DKEY-21O22 in ... 40 5.3
51emb|BX914214.12| Zebrafish DNA sequence from clone DKEY-9I5 in l... 40 5.3
52gb|AY449459.1| Oikopleura dioica clone BACOIKO003 5xk14, complet... 40 5.3
53dbj|AP001021.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 5.3
54gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster... 40 5.3
55gb|AC140220.4| Mus musculus BAC clone RP23-279P6 from 5, complet... 40 5.3
56emb|CR940308.12| M.truncatula DNA sequence from clone MTH2-17G23... 40 5.3
57dbj|AP005228.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 5.3
58emb|AL808012.13| Mouse DNA sequence from clone RP23-451N14 on ch... 40 5.3
59emb|AL732571.8| Mouse DNA sequence from clone RP23-23D11 on chro... 40 5.3
60gb|L26052.1|BACCCPA Bacillus megaterium catabolite control prote... 40 5.3 
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence
          Length = 187012

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 130   ttttgaattaagccctataaaccggaaaggagg 162
             ||||||||| |||||||||||||| ||||||||
Sbjct: 69642 ttttgaattgagccctataaaccgaaaaggagg 69610



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 126   aaaattttgaattaagccctataaaccggaaaggagg 162
             ||||||||||  |||||||||||||| | ||||||||
Sbjct: 69890 aaaattttgagataagccctataaactgaaaaggagg 69926
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>gb|AC124497.3| Mus musculus BAC clone RP23-480E8 from chromosome 5, complete sequence
          Length = 206926

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 209    gaagaaaattttaatataaaacca 232
              ||||||||||||||||||||||||
Sbjct: 113456 gaagaaaattttaatataaaacca 113479
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>gb|AC025028.21| Homo sapiens 3 BAC RP11-238M12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 145969

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 206    aaagaagaaaattttaatataaaa 229
              ||||||||||||||||||||||||
Sbjct: 134883 aaagaagaaaattttaatataaaa 134860
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>gb|AC154319.2| Mus musculus BAC clone RP23-331I13 from chromosome 9, complete sequence
          Length = 196331

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 208    agaagaaaattttaatataaaa 229
              ||||||||||||||||||||||
Sbjct: 146560 agaagaaaattttaatataaaa 146539
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 115      ctcaaaacatgaaaattttgaa 136
                ||||||||||||||||||||||
Sbjct: 28016360 ctcaaaacatgaaaattttgaa 28016339
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>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0562A06
          Length = 154198

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 115   ctcaaaacatgaaaattttgaa 136
             ||||||||||||||||||||||
Sbjct: 93852 ctcaaaacatgaaaattttgaa 93831
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>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0604E01
          Length = 159049

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 115   ctcaaaacatgaaaattttgaa 136
             ||||||||||||||||||||||
Sbjct: 13855 ctcaaaacatgaaaattttgaa 13834
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>gb|AC163623.5| Mus musculus BAC clone RP23-123D6 from chromosome 9, complete sequence
          Length = 193784

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 194    aaatacatgaacaaagaagaa 214
              |||||||||||||||||||||
Sbjct: 169141 aaatacatgaacaaagaagaa 169121
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>gb|AC122244.5| Mus musculus BAC clone RP23-149I9 from chromosome 10, complete sequence
          Length = 187474

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 211    agaaaattttaatataaaacc 231
              |||||||||||||||||||||
Sbjct: 128135 agaaaattttaatataaaacc 128155
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>emb|CR450766.5| Zebrafish DNA sequence from clone DKEY-192C10 in linkage group 8,
             complete sequence
          Length = 127307

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 182   aatccccatccaaaatacatgaaca 206
             |||| ||||||||||||||||||||
Sbjct: 65445 aatcaccatccaaaatacatgaaca 65469
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>gb|AC139296.4| Mus musculus BAC clone RP24-131C5 from chromosome 18, complete sequence
          Length = 165703

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 216   attttaatataaaaccaggca 236
             |||||||||||||||||||||
Sbjct: 73919 attttaatataaaaccaggca 73899
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>gb|AC110090.6| Mus musculus BAC clone RP23-27L4 from chromosome 1, complete sequence
          Length = 218518

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 251    aaaacagtggttgtctactat 271
              |||||||||||||||||||||
Sbjct: 135171 aaaacagtggttgtctactat 135151
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>ref|XM_675306.1| Plasmodium berghei strain ANKA hypothetical protein (PB001268.02.0)
            partial mRNA
          Length = 3669

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 29   taattaattttttgttcaaaa 49
            |||||||||||||||||||||
Sbjct: 3455 taattaattttttgttcaaaa 3475
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>gb|U91841.2|BFU91841 Bacillus pseudofirmus catabolite control protein A (ccpA) gene,
           partial cds; channel protein (motP), channel protein
           (motS), and
           5'-methylthioadenosine/S-adenosylhomocysteine (pfs)
           genes, complete cds; and acetoin dehydrogenase (acuC)
           gene, partial cds
          Length = 4321

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 194 aaatacatgaacaaagaagaa 214
           |||||||||||||||||||||
Sbjct: 798 aaatacatgaacaaagaagaa 818
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>gb|AC116320.5| Mus musculus chromosome 18 clone RP23-269B16, complete sequence
          Length = 195630

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 216   attttaatataaaaccaggca 236
             |||||||||||||||||||||
Sbjct: 27863 attttaatataaaaccaggca 27843
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>emb|AL117325.3|HSDA79C13 Human DNA sequence from clone RP6-79C13 on chromosome Xq21.1-21.32
            Contains the 5' end of the gene for premature ovarian
            failure 1B (POF1B), complete sequence
          Length = 83673

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 194  aaatacatgaacaaagaagaaaatt 218
            |||||||||||||||| ||||||||
Sbjct: 4779 aaatacatgaacaaagtagaaaatt 4803
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>emb|AL031289.1|HS739H11 Human DNA sequence from clone RP4-739H11 on chromosome 1p33-34.2 Contains
              the RIMS3 gene for regulating synaptic membrane exocytosis
              3, a general transcription factor IIF, polypeptide 2, 30kDa
              (GTF2F2) pseudogene, a novel gene and the 5' end of the
              NFYC gene for nuclear transcription factor Y, gamma,
              complete sequence
          Length = 129950

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 209    gaagaaaattttaatataaaa 229
              |||||||||||||||||||||
Sbjct: 107065 gaagaaaattttaatataaaa 107085
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>gb|AC105245.4| Homo sapiens chromosome 18, clone CTD-2515C13, complete sequence
          Length = 200721

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 207   aagaagaaaattttaatataa 227
             |||||||||||||||||||||
Sbjct: 20278 aagaagaaaattttaatataa 20258
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>gb|AC090349.7| Homo sapiens chromosome 18, clone RP11-844N22, complete sequence
          Length = 132191

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 207   aagaagaaaattttaatataa 227
             |||||||||||||||||||||
Sbjct: 63345 aagaagaaaattttaatataa 63325
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>gb|AC157363.6| Mus musculus chromosome 1, clone RP23-478L14, complete sequence
          Length = 209942

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   aacaaagaagaaaattttaat 223
             |||||||||||||||||||||
Sbjct: 26605 aacaaagaagaaaattttaat 26625
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>emb|AL732501.8| Mouse DNA sequence from clone RP23-325I22 on chromosome X, complete
             sequence
          Length = 206856

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 29    taattaattttttgttcaaaa 49
             |||||||||||||||||||||
Sbjct: 30885 taattaattttttgttcaaaa 30905
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>gb|U28932.1|MMU28932 Mus musculus smooth muscle calponin gene, complete cds
          Length = 9451

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 194  aaatacatgaacaaagaagaa 214
            |||||||||||||||||||||
Sbjct: 3724 aaatacatgaacaaagaagaa 3704
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>gb|AC005303.1|AC005303 Homo sapiens chromosome 17, clone hRPK.488_L_1, complete sequence
          Length = 89990

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 210   aagaaaattttaatataaaac 230
             |||||||||||||||||||||
Sbjct: 37743 aagaaaattttaatataaaac 37763
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>gb|L49022.1|MUSH1CA Mus musculus h1-calponin alpha and beta genes, complete cds
          Length = 10373

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 194  aaatacatgaacaaagaagaa 214
            |||||||||||||||||||||
Sbjct: 4439 aaatacatgaacaaagaagaa 4419
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>gb|AC170422.1| Rhesus Macaque  BAC CH250-106F22 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 185455

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    aaagaagaaaattttaatat 225
              ||||||||||||||||||||
Sbjct: 154225 aaagaagaaaattttaatat 154206
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>gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035J08,
              complete sequence
          Length = 117555

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    aaacatgaaaattttgaatt 138
              ||||||||||||||||||||
Sbjct: 117350 aaacatgaaaattttgaatt 117331
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>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0068N01, complete sequence
          Length = 152233

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  aaacatgaaaattttgaatt 138
            ||||||||||||||||||||
Sbjct: 3477 aaacatgaaaattttgaatt 3458
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>gb|AC147069.2| Pan troglodytes BAC clone RP43-165H20 from 7, complete sequence
          Length = 193047

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   aaaacatgaaaattttgaat 137
             ||||||||||||||||||||
Sbjct: 51740 aaaacatgaaaattttgaat 51759
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>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 194   aaatacatgaacaaagaagaaaat 217
             ||||||||||||| ||||||||||
Sbjct: 28051 aaatacatgaacatagaagaaaat 28028
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>gb|AF532975.1| Oryza sativa (indica cultivar-group) IR24 chromosome 5 BAC, complete
             sequence
          Length = 86190

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   aaacatgaaaattttgaatt 138
             ||||||||||||||||||||
Sbjct: 29179 aaacatgaaaattttgaatt 29160
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>emb|Z81565.1|CEK06G5 Caenorhabditis elegans Cosmid K06G5, complete sequence
          Length = 27289

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    taattaattttttgttcaaa 48
             ||||||||||||||||||||
Sbjct: 14414 taattaattttttgttcaaa 14433
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>gb|AC129319.4| Mus musculus BAC clone RP24-127J16 from chromosome 8, complete sequence
          Length = 169835

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    tcaaaacatgaaaattttga 135
              ||||||||||||||||||||
Sbjct: 145067 tcaaaacatgaaaattttga 145086
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>gb|AC129313.4| Mus musculus BAC clone RP23-342K4 from chromosome 8, complete sequence
          Length = 215576

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   tcaaaacatgaaaattttga 135
             ||||||||||||||||||||
Sbjct: 38855 tcaaaacatgaaaattttga 38874
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>emb|AL603765.6| Human DNA sequence from clone RP11-351G1 on chromosome 1, complete
             sequence
          Length = 157497

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   aaggaaaacagtggttgtct 266
             ||||||||||||||||||||
Sbjct: 83306 aaggaaaacagtggttgtct 83325
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>emb|AL357932.15| Human DNA sequence from clone RP11-435N12 on chromosome 1, complete
              sequence
          Length = 179782

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    tgaacaaagaagaaaatttt 220
              ||||||||||||||||||||
Sbjct: 156071 tgaacaaagaagaaaatttt 156090
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>gb|AC105910.10| Homo sapiens chromosome 8, clone CTD-2036J7, complete sequence
          Length = 190836

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   aattttaatataaaaccagg 234
             ||||||||||||||||||||
Sbjct: 52774 aattttaatataaaaccagg 52793
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>gb|AC121333.5| Homo sapiens 3 BAC RP11-691G17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 142378

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 308   atcacaagtggaaggagcagaaac 331
             ||||||| ||||||||||||||||
Sbjct: 73638 atcacaactggaaggagcagaaac 73615
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>gb|AC015528.14| Homo sapiens chromosome 8, clone RP11-179A23, complete sequence
          Length = 155518

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   aaaacatgaaaattttgaat 137
             ||||||||||||||||||||
Sbjct: 81213 aaaacatgaaaattttgaat 81194
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>gb|AC087692.7| Homo sapiens chromosome 8, clone RP11-67D13, complete sequence
          Length = 146549

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   atgaaaattttgaattaagc 142
             ||||||||||||||||||||
Sbjct: 69915 atgaaaattttgaattaagc 69934
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>emb|CR318632.9| Zebrafish DNA sequence from clone CH211-113N10 in linkage group 5,
              complete sequence
          Length = 143278

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    aaagaagaaaattttaatat 225
              ||||||||||||||||||||
Sbjct: 133591 aaagaagaaaattttaatat 133572
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>gb|AC026991.9| Homo sapiens, clone RP11-279L11, complete sequence
          Length = 169196

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    atgaaaattttgaattaagc 142
              ||||||||||||||||||||
Sbjct: 155324 atgaaaattttgaattaagc 155305
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>gb|AC161147.6| Mus musculus BAC clone RP23-357G12 from chromosome 6, complete sequence
          Length = 225957

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    agaaaattttaatataaaac 230
              ||||||||||||||||||||
Sbjct: 166941 agaaaattttaatataaaac 166960
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>emb|BX248517.10| Zebrafish DNA sequence from clone DKEY-30O16 in linkage group 16,
              complete sequence
          Length = 201353

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    aacaaagaagaaaattttaa 222
              ||||||||||||||||||||
Sbjct: 165950 aacaaagaagaaaattttaa 165969
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>gb|AF234648.1|AF234648 Triticum aestivum clone G6 gamma-gliadin pseudogene, complete
           sequence
          Length = 5150

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 139 aagccctataaaccggaaaggagg 162
           ||||| ||||||||||||||||||
Sbjct: 554 aagccttataaaccggaaaggagg 577
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    aaacatgaaaattttgaatt 138
              ||||||||||||||||||||
Sbjct: 341830 aaacatgaaaattttgaatt 341811
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>gb|AC018644.6|AC018644 Homo sapiens chromosome 7 clone RP11-383F6, complete sequence
          Length = 193643

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   aaaacatgaaaattttgaat 137
             ||||||||||||||||||||
Sbjct: 88873 aaaacatgaaaattttgaat 88854
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>gb|AC025290.3|F9P14 Sequence of BAC F9P14 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 48872

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   atacatgaacaaagaagaaa 215
             ||||||||||||||||||||
Sbjct: 37757 atacatgaacaaagaagaaa 37738
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>dbj|AK105734.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H10, full
            insert sequence
          Length = 2159

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 119  aaacatgaaaattttgaatt 138
            ||||||||||||||||||||
Sbjct: 1772 aaacatgaaaattttgaatt 1791
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>gb|AC146966.3| Bos taurus clone RP42-139G14, complete sequence
          Length = 179474

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 194   aaatacatgaacaaagaagaaaat 217
             ||||||||||||| ||||||||||
Sbjct: 28051 aaatacatgaacatagaagaaaat 28028
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>emb|BX649263.6| Zebrafish DNA sequence from clone DKEY-21O22 in linkage group 4, complete
              sequence
          Length = 143254

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 210    aagaaaattttaatataaaaccag 233
              ||||||||||||||||||| ||||
Sbjct: 115977 aagaaaattttaatataaatccag 115954
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>emb|BX914214.12| Zebrafish DNA sequence from clone DKEY-9I5 in linkage group 3, complete
             sequence
          Length = 137573

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   ttttaatataaaaccaggca 236
             ||||||||||||||||||||
Sbjct: 82985 ttttaatataaaaccaggca 83004
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>gb|AY449459.1| Oikopleura dioica clone BACOIKO003 5xk14, complete sequence
          Length = 158922

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 37     tttttgttcaaaacagcgggcaga 60
              ||||||||||||||||| ||||||
Sbjct: 143084 tttttgttcaaaacagctggcaga 143061
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>dbj|AP001021.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-793A3, complete
              sequence
          Length = 222596

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    tttaatataaaaccaggcat 237
              ||||||||||||||||||||
Sbjct: 206710 tttaatataaaaccaggcat 206729
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>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome
          Length = 1267782

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    aagaaaattttaatataaaa 229
              ||||||||||||||||||||
Sbjct: 196963 aagaaaattttaatataaaa 196944
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>gb|AC140220.4| Mus musculus BAC clone RP23-279P6 from 5, complete sequence
          Length = 182156

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    aattaattttttgttcaaaa 49
             ||||||||||||||||||||
Sbjct: 87530 aattaattttttgttcaaaa 87511
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>emb|CR940308.12| M.truncatula DNA sequence from clone MTH2-17G23 on chromosome 3, complete
              sequence
          Length = 121494

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 193    aaaatacatgaacaaagaagaaaa 216
              ||||||||||||||||||| ||||
Sbjct: 114037 aaaatacatgaacaaagaaaaaaa 114060
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>dbj|AP005228.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-119P12, complete
             sequence
          Length = 186978

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   tttaatataaaaccaggcat 237
             ||||||||||||||||||||
Sbjct: 48825 tttaatataaaaccaggcat 48844
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>emb|AL808012.13| Mouse DNA sequence from clone RP23-451N14 on chromosome X, complete
              sequence
          Length = 116926

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 194    aaatacatgaacaaagaagaaaat 217
              ||||||||||||||| ||||||||
Sbjct: 107746 aaatacatgaacaaaaaagaaaat 107723
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>emb|AL732571.8| Mouse DNA sequence from clone RP23-23D11 on chromosome 4, complete
              sequence
          Length = 214061

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    acaaagaagaaaattttaat 223
              ||||||||||||||||||||
Sbjct: 177811 acaaagaagaaaattttaat 177792
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>gb|L26052.1|BACCCPA Bacillus megaterium catabolite control protein (ccpA) gene, complete
            cds
          Length = 3471

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 192  caaaatacatgaacaaagaa 211
            ||||||||||||||||||||
Sbjct: 1796 caaaatacatgaacaaagaa 1815


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,371,248
Number of Sequences: 3902068
Number of extensions: 5371248
Number of successful extensions: 121756
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121505
Number of HSP's gapped (non-prelim): 251
length of query: 399
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 377
effective length of database: 17,147,199,772
effective search space: 6464494314044
effective search space used: 6464494314044
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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