>emb|AL513523.33| Human DNA sequence from clone RP11-216N14 on chromosome 1 Contains a
survival of motor neuron protein interacting protein 1
pseudogene (SIP1), a novel gene (FLJ21919), two novel
genes, a novel gene, the SLC27A3 gene for solute carrier
family 27 (fatty acid transporter), member 3, a pseudogene
similar to part of putative neuronal cell adhesion
molecule (PUNC), the 3' end of the gene for transcription
repressor p66 beta component of the MeCP1 complex
(P66beta), a adipose differentiation-related protein
(ADFP) pseudogene and a CpG island, complete sequence
Length = 150166
Score = 40.1 bits (20), Expect = 2.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 acaccccatcttaaaaaaca 137
||||||||||||||||||||
Sbjct: 38424 acaccccatcttaaaaaaca 38405
>emb|AL356796.16| Human DNA sequence from clone RP11-82I1 on chromosome 9 Contains the 3'
end of a novel gene (FLJ11985, MGC11337) (KIAA0870), the
ORM1 gene for orosomucoid 1 (AGP1, AGP-A), the ORM2 gene
for orosomucoid 2 (AGP2, AGP-B) and the gene for AT-hook
transcription factor AKNA, complete sequence
Length = 125673
Score = 40.1 bits (20), Expect = 2.7
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 112 atctcaacaccccatcttaaaaaa 135
||||||| ||||||||||||||||
Sbjct: 28298 atctcaagaccccatcttaaaaaa 28321
>dbj|AB039887.1| Homo sapiens WDR4 gene for WD repeat protein, complete cds
Length = 45000
Score = 40.1 bits (20), Expect = 2.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 116 caacaccccatcttaaaaaa 135
||||||||||||||||||||
Sbjct: 25295 caacaccccatcttaaaaaa 25276
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,827,949
Number of Sequences: 3902068
Number of extensions: 1827949
Number of successful extensions: 118725
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118708
Number of HSP's gapped (non-prelim): 17
length of query: 215
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 193
effective length of database: 17,147,199,772
effective search space: 3309409555996
effective search space used: 3309409555996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)