>gb|BT016329.1| Zea mays clone Contig162 mRNA sequence
          Length = 1199

 Score =  109 bits (55), Expect = 8e-21
 Identities = 88/99 (88%)
 Strand = Plus / Minus

                                                                       
Query: 345 aagcaaacctagcaggcatccagatccctgcatgggggaggttttggctctcctagcaag 404
           ||||||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||
Sbjct: 909 aagcaaacctagcaggcatccagatccctgcatggaggaggtttcggctctccgtgcaag 850

                                                  
Query: 405 ggggtcatccctccagcagggccgcagtttttccgctct 443
           | |||  |||| || |||||||| |||||||| ||||||
Sbjct: 849 gtggtgttccccccggcagggccacagttttttcgctct 811

>gb|AY106442.1| Zea mays PCO078493 mRNA sequence
          Length = 1289

 Score =  109 bits (55), Expect = 8e-21
 Identities = 88/99 (88%)
 Strand = Plus / Minus

                                                                       
Query: 345 aagcaaacctagcaggcatccagatccctgcatgggggaggttttggctctcctagcaag 404
           ||||||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||
Sbjct: 917 aagcaaacctagcaggcatccagatccctgcatggaggaggtttcggctctccgtgcaag 858

                                                  
Query: 405 ggggtcatccctccagcagggccgcagtttttccgctct 443
           | |||  |||| || |||||||| |||||||| ||||||
Sbjct: 857 gtggtgttccccccggcagggccacagttttttcgctct 819

>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0108E17, complete sequence
          Length = 139829

 Score =  103 bits (52), Expect = 5e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                         
Query: 344   aaagcaaacctagcaggcatccagatccctgcatgggggaggttttggctctcctagcaa 403
             ||||||||||||||| ||||| ||||||||||| || |||||||| ||||| ||  ||||
Sbjct: 86071 aaagcaaacctagcaagcatctagatccctgcacggaggaggtttcggctcaccgtgcaa 86012

                                                     
Query: 404   gggggtcatccctccagcagggccgcagtttttccgctct 443
             || |||  |||||||||||||||| |||||||||||||||
Sbjct: 86011 ggtggtattccctccagcagggccacagtttttccgctct 85972

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  103 bits (52), Expect = 5e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                            
Query: 344      aaagcaaacctagcaggcatccagatccctgcatgggggaggttttggctctcctagcaa 403
                ||||||||||||||| ||||| ||||||||||| || |||||||| ||||| ||  ||||
Sbjct: 25017218 aaagcaaacctagcaagcatctagatccctgcacggaggaggtttcggctcaccgtgcaa 25017159

                                                        
Query: 404      gggggtcatccctccagcagggccgcagtttttccgctct 443
                || |||  |||||||||||||||| |||||||||||||||
Sbjct: 25017158 ggtggtattccctccagcagggccacagtttttccgctct 25017119

>dbj|AK099007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114B12, full
           insert sequence
          Length = 1147

 Score =  103 bits (52), Expect = 5e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                       
Query: 344 aaagcaaacctagcaggcatccagatccctgcatgggggaggttttggctctcctagcaa 403
           ||||||||||||||| ||||| ||||||||||| || |||||||| ||||| ||  ||||
Sbjct: 887 aaagcaaacctagcaagcatctagatccctgcacggaggaggtttcggctcaccgtgcaa 828

                                                   
Query: 404 gggggtcatccctccagcagggccgcagtttttccgctct 443
           || |||  |||||||||||||||| |||||||||||||||
Sbjct: 827 ggtggtattccctccagcagggccacagtttttccgctct 788

>dbj|AK061566.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E10, full
           insert sequence
          Length = 1219

 Score =  103 bits (52), Expect = 5e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                       
Query: 344 aaagcaaacctagcaggcatccagatccctgcatgggggaggttttggctctcctagcaa 403
           ||||||||||||||| ||||| ||||||||||| || |||||||| ||||| ||  ||||
Sbjct: 890 aaagcaaacctagcaagcatctagatccctgcacggaggaggtttcggctcaccgtgcaa 831

                                                   
Query: 404 gggggtcatccctccagcagggccgcagtttttccgctct 443
           || |||  |||||||||||||||| |||||||||||||||
Sbjct: 830 ggtggtattccctccagcagggccacagtttttccgctct 791

>dbj|AK100226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048E09, full
           insert sequence
          Length = 1120

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                       
Query: 344 aaagcaaacctagcaggcatccagatccctgcatgggggaggttttggctctcctagcaa 403
           ||||||||||||||| ||||| ||||||||||| || |||||||| ||||| ||  ||||
Sbjct: 885 aaagcaaacctagcaagcatctagatccctgcacggaggaggtttcggctcaccgtgcaa 826

                                                   
Query: 404 gggggtcatccctccagcagggccgcagtttttccgctct 443
           || |||  ||| |||||||||||| |||||||||||||||
Sbjct: 825 ggtggtattccttccagcagggccacagtttttccgctct 786

>ref|XM_475674.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 825

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                       
Query: 353 ctagcaggcatccagatccctgcatgggggaggttttggctctcctagcaagggggtcat 412
           |||||| ||||| ||||||||||| || |||||||| ||||| ||  |||||| |||  |
Sbjct: 825 ctagcaagcatctagatccctgcacggaggaggtttcggctcaccgtgcaaggtggtatt 766

                                          
Query: 413 ccctccagcagggccgcagtttttccgctct 443
           ||||||||||||||| |||||||||||||||
Sbjct: 765 ccctccagcagggccacagtttttccgctct 735

>emb|BX539307.6| Zebrafish DNA sequence from clone DKEY-253D23 in linkage group 22,
             complete sequence
          Length = 183551

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 140   gcaaaccaaggggaaaaaagaga 162
             |||||||||||||||||||||||
Sbjct: 22001 gcaaaccaaggggaaaaaagaga 21979

>emb|CR759788.7| Zebrafish DNA sequence from clone CH211-153F13, complete sequence
          Length = 197075

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 173   taaacgtgtccaattgtcagacaaa 197
             ||||||||| |||||||||||||||
Sbjct: 32045 taaacgtgtacaattgtcagacaaa 32069

>gb|AC024599.9| Homo sapiens chromosome 10 clone RP11-159H3, complete sequence
          Length = 173391

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 156   aaagagatggtgacaggtaaa 176
             |||||||||||||||||||||
Sbjct: 26848 aaagagatggtgacaggtaaa 26868

>gb|AC012690.17| Homo sapiens chromosome 10 clone RP11-127B19, complete sequence
          Length = 161276

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 156    aaagagatggtgacaggtaaa 176
              |||||||||||||||||||||
Sbjct: 116201 aaagagatggtgacaggtaaa 116221

>gb|U50066.1| Caenorhabditis elegans cosmid T14A8, complete sequence
          Length = 9170

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  acaagaaagctttgagaaca 266
            ||||||||||||||||||||
Sbjct: 7589 acaagaaagctttgagaaca 7608

>gb|AC011899.5| Homo sapiens BAC clone RP11-452C13 from 7, complete sequence
          Length = 214229

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    ggtgtgtccagggccccaga 47
             ||||||||||||||||||||
Sbjct: 42507 ggtgtgtccagggccccaga 42488

>emb|AL604002.8| Mouse DNA sequence from clone RP23-386F6 on chromosome 11, complete
              sequence
          Length = 142134

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     cagggccccagattcttatg 55
              ||||||||||||||||||||
Sbjct: 106779 cagggccccagattcttatg 106760

>gb|AF238375.3| Homo sapiens chromosome 21 clone BAC 49B5 map 21q21, complete sequence
          Length = 166124

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 312    gccaacttatttgtgtgcttgctt 335
              |||||||| |||||||||||||||
Sbjct: 116671 gccaacttgtttgtgtgcttgctt 116648

>emb|CR389787.1| Gallus gallus finished cDNA, clone ChEST713n9
          Length = 855

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 194 caaaagaaagcttcgacaacaaca 217
           ||||||||||||| ||||||||||
Sbjct: 439 caaaagaaagctttgacaacaaca 462

>gb|BC034557.1| Homo sapiens, clone IMAGE:4475530, mRNA
          Length = 4319

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 28   ggtgtgtccagggccccaga 47
            ||||||||||||||||||||
Sbjct: 1303 ggtgtgtccagggccccaga 1284

>dbj|BS000057.1| Pan troglodytes chromosome 22 clone:RP43-020J03, map 22, complete
              sequences
          Length = 185342

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 312    gccaacttatttgtgtgcttgctt 335
              |||||||| |||||||||||||||
Sbjct: 111538 gccaacttgtttgtgtgcttgctt 111515

>gb|AC147627.6| Mus musculus BAC clone RP24-382F19 from Y, complete sequence
          Length = 226237

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     cagctccagaatatatagca 103
              ||||||||||||||||||||
Sbjct: 200942 cagctccagaatatatagca 200923

>dbj|AP001677.1| Homo sapiens genomic DNA, chromosome 21q, section 21/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 312    gccaacttatttgtgtgcttgctt 335
              |||||||| |||||||||||||||
Sbjct: 304239 gccaacttgtttgtgtgcttgctt 304216

>gb|AC116556.14| Mus musculus strain C57BL/6J chromosome 8 clone rp23-184i13, complete
              sequence
          Length = 239958

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    ttatttgtgtgcttgcttgc 337
              ||||||||||||||||||||
Sbjct: 172254 ttatttgtgtgcttgcttgc 172273

>gb|AC140919.2| Mus musculus BAC clone RP24-510L10 from 1, complete sequence
          Length = 159472

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    ttatttgtgtgcttgcttgc 337
              ||||||||||||||||||||
Sbjct: 146961 ttatttgtgtgcttgcttgc 146980

>gb|AC173476.2| Mus musculus BAC clone RP24-335D7 from chromosome 12, complete sequence
          Length = 182245

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     cagctccagaatatatagca 103
              ||||||||||||||||||||
Sbjct: 109755 cagctccagaatatatagca 109736

>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome
          Length = 1796846

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      cagcataacagcaatcaatt 20
              ||||||||||||||||||||
Sbjct: 680440 cagcataacagcaatcaatt 680421

>dbj|AP001256.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B732H1,
             LL56-APP region, complete sequence
          Length = 204699

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 312   gccaacttatttgtgtgcttgctt 335
             |||||||| |||||||||||||||
Sbjct: 48660 gccaacttgtttgtgtgcttgctt 48637


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,087,594
Number of Sequences: 3902068
Number of extensions: 4087594
Number of successful extensions: 74756
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74683
Number of HSP's gapped (non-prelim): 73
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)