| Clone Name | rbast23b11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_710515.1| Candida albicans SC5314 hypothetical protein (CaO19_10414), mRNA Length = 846 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 agctgcatgtactcatttagc 218 ||||||||||||||||||||| Sbjct: 576 agctgcatgtactcatttagc 596
>ref|XM_710459.1| Candida albicans SC5314 hypothetical protein (CaO19_2896), mRNA Length = 846 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 agctgcatgtactcatttagc 218 ||||||||||||||||||||| Sbjct: 576 agctgcatgtactcatttagc 596
>emb|AL139081.21| Human DNA sequence from clone RP11-179A7 on chromosome 13 Contains parts of 2 novel genes and the RFC3 gene for replication factor C (activator 1) 3, 38kDa, complete sequence Length = 185602 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 tctcagcagttagaaccaaaa 48 ||||||||||||||||||||| Sbjct: 58227 tctcagcagttagaaccaaaa 58207
>gb|AC096769.3| Homo sapiens BAC clone RP11-734O19 from 4, complete sequence Length = 70806 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ctaccagctacctgcttcatg 104 ||||||||||||||||||||| Sbjct: 2058 ctaccagctacctgcttcatg 2038
>gb|AF002134.1|AF002134 Candida albicans Sou2p (SOU2), Sou1p (SOU1) and Vma8p (VMA8) genes, complete cds Length = 4293 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 agctgcatgtactcatttagc 218 ||||||||||||||||||||| Sbjct: 2638 agctgcatgtactcatttagc 2658
>gb|BT016062.1| Drosophila melanogaster LP13637 full insert cDNA Length = 1755 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 tacggctgccagttccttgccgcc 176 ||||||||||||||||| |||||| Sbjct: 1355 tacggctgccagttcctcgccgcc 1332
>gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosome 9, complete sequence Length = 198803 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 aattatggccaatgactggg 126 |||||||||||||||||||| Sbjct: 70953 aattatggccaatgactggg 70934
>gb|AC004006.1| Homo sapiens PAC clone RP4-740B21 from 7, complete sequence Length = 119453 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 tttttagaataaaaattctc 25 |||||||||||||||||||| Sbjct: 92604 tttttagaataaaaattctc 92585
>gb|AC010028.8| Drosophila melanogaster 3L BAC RP98-1E20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187489 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 tacggctgccagttccttgccgcc 176 ||||||||||||||||| |||||| Sbjct: 77304 tacggctgccagttcctcgccgcc 77327
>ref|NM_079274.2| Drosophila melanogaster Heat shock gene 67Ba CG4167-RA (Hsp67Ba), mRNA Length = 1338 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 tacggctgccagttccttgccgcc 176 ||||||||||||||||| |||||| Sbjct: 1260 tacggctgccagttcctcgccgcc 1237
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ccaaaattcacgttttcgtg 62 |||||||||||||||||||| Sbjct: 12023900 ccaaaattcacgttttcgtg 12023881
>gb|AE003552.4| Drosophila melanogaster chromosome 3L, section 33 of 83 of the complete sequence Length = 286770 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 tacggctgccagttccttgccgcc 176 ||||||||||||||||| |||||| Sbjct: 187901 tacggctgccagttcctcgccgcc 187924
>gb|AC160119.3| Mus musculus BAC clone RP23-431F16 from chromosome 9, complete sequence Length = 190900 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 aattatggccaatgactggg 126 |||||||||||||||||||| Sbjct: 74601 aattatggccaatgactggg 74620
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ccaaaattcacgttttcgtg 62 |||||||||||||||||||| Sbjct: 11953303 ccaaaattcacgttttcgtg 11953322 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,492,126 Number of Sequences: 3902068 Number of extensions: 2492126 Number of successful extensions: 44360 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44319 Number of HSP's gapped (non-prelim): 41 length of query: 303 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 281 effective length of database: 17,147,199,772 effective search space: 4818363135932 effective search space used: 4818363135932 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)