ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast22h09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SCRK1_ORYSA (Q944F4) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I... 39 0.004
2SCRK1_MAIZE (Q6XZ79) Fructokinase-1 (EC 2.7.1.4) (ZmFRK1) 37 0.014
3SCRK_SOLTU (P37829) Fructokinase (EC 2.7.1.4) 29 3.9

>SCRK1_ORYSA (Q944F4) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI)|
          Length = 323

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 17/21 (80%), Positives = 21/21 (100%)
 Frame = -3

Query: 185 RKGAIPSLPTEIEVLQLMENA 123
           +KGAIPSLPTE+EVL+LME+A
Sbjct: 303 KKGAIPSLPTEVEVLKLMESA 323



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>SCRK1_MAIZE (Q6XZ79) Fructokinase-1 (EC 2.7.1.4) (ZmFRK1)|
          Length = 323

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 17/21 (80%), Positives = 19/21 (90%)
 Frame = -3

Query: 185 RKGAIPSLPTEIEVLQLMENA 123
           +KGAIPSLPTE EVLQL+E A
Sbjct: 303 KKGAIPSLPTEAEVLQLIEKA 323



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>SCRK_SOLTU (P37829) Fructokinase (EC 2.7.1.4)|
          Length = 319

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = -3

Query: 185 RKGAIPSLPTEIEVLQLME 129
           +KGAIP+LPTE E L L++
Sbjct: 298 KKGAIPALPTESEALTLLK 316


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,693,711
Number of Sequences: 219361
Number of extensions: 441249
Number of successful extensions: 773
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 80,573,946
effective HSP length: 37
effective length of database: 72,457,589
effective search space used: 1738982136
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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