>tpg|BK005598.1| TPA: TPA_exp: Homo sapiens NSP (NSP) gene, complete cds, alternatively
              spliced
          Length = 227735

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 49     caaaaggcaaagataatgaaaa 70
              ||||||||||||||||||||||
Sbjct: 135971 caaaaggcaaagataatgaaaa 135950

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 224    ctcccgttggccgccggcgacg 245
              ||||||||||||||||||||||
Sbjct: 651170 ctcccgttggccgccggcgacg 651149

>gb|AC004702.1|AC004702 Homo sapiens chromosome 17, clone HRPC836L9, complete sequence
          Length = 120821

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 49    caaaaggcaaagataatgaaaa 70
             ||||||||||||||||||||||
Sbjct: 67258 caaaaggcaaagataatgaaaa 67279

>emb|AL672068.13| Mouse DNA sequence from clone RP23-69M9 on chromosome X, complete
             sequence
          Length = 217917

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 51    aaaggcaaagataatgaaaaat 72
             ||||||||||||||||||||||
Sbjct: 29802 aaaggcaaagataatgaaaaat 29781

>gb|AC093819.4| Homo sapiens BAC clone RP11-368D18 from 4, complete sequence
          Length = 168474

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 41     ttgaaaaacaaaaggcaaagataat 65
              |||| ||||||||||||||||||||
Sbjct: 126259 ttgataaacaaaaggcaaagataat 126283

>emb|CR956406.10| Pig DNA sequence from clone CH242-143L3 on chromosome 17, complete
             sequence
          Length = 177073

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 93    ttttcctttgagaaaaaagtgagacacac 121
             ||||| ||||||||||||| |||||||||
Sbjct: 85816 ttttcatttgagaaaaaagagagacacac 85788

>gb|AC010047.8| Drosophila melanogaster 3L BAC RP98-28E17 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 164201

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 43    gaaaaacaaaaggcaaagata 63
             |||||||||||||||||||||
Sbjct: 92845 gaaaaacaaaaggcaaagata 92825

>gb|AC104447.2| Homo sapiens chromosome 3 clone RP11-447D11, complete sequence
          Length = 202544

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 100   ttgagaaaaaagtgagacaca 120
             |||||||||||||||||||||
Sbjct: 84799 ttgagaaaaaagtgagacaca 84819

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 223     cctcccgttggccgccggcga 243
               |||||||||||||||||||||
Sbjct: 3405321 cctcccgttggccgccggcga 3405301

>emb|BX469935.5| Zebrafish DNA sequence from clone CH211-244H1 in linkage group 21,
              complete sequence
          Length = 171507

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 34     tgtgtacttgaaaaacaaaag 54
              |||||||||||||||||||||
Sbjct: 115784 tgtgtacttgaaaaacaaaag 115804

>gb|AE003479.3| Drosophila melanogaster chromosome 3L, section 13 of 83 of the complete
              sequence
          Length = 309958

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 43     gaaaaacaaaaggcaaagata 63
              |||||||||||||||||||||
Sbjct: 168471 gaaaaacaaaaggcaaagata 168451

>emb|AL645484.14| Mouse DNA sequence from clone RP23-38A10 on chromosome 11, complete
             sequence
          Length = 161787

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 196   aaatgtacacagcccatgtcaccccttcc 224
             ||||| |||||||| ||||||||||||||
Sbjct: 17124 aaatgcacacagccaatgtcaccccttcc 17152

>gb|AF496558.1| Carassius auratus beta globin and alpha globin genes, intergenic
           region and partial cds
          Length = 976

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 aaaaagtgagacacacttct 125
           ||||||||||||||||||||
Sbjct: 873 aaaaagtgagacacacttct 892

>ref|XM_422059.1| PREDICTED: Gallus gallus similar to FUSED serine/threonine kinase
           (LOC424210), mRNA
          Length = 4008

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  tttctccacctttttctgtg 37
           ||||||||||||||||||||
Sbjct: 957 tttctccacctttttctgtg 938

>ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome region (PWSAS@) on chromosome
              15
          Length = 755217

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 93     ttttcctttgagaaaaaagtgaga 116
              |||||||||||||||| |||||||
Sbjct: 248075 ttttcctttgagaaaacagtgaga 248052

>emb|AL355332.8| Human DNA sequence from clone RP11-390F23 on chromosome 10 Contains a
             CpG island, complete sequence
          Length = 182997

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    tctgtgtacttgaaaaacaa 51
             ||||||||||||||||||||
Sbjct: 13345 tctgtgtacttgaaaaacaa 13364

>gb|AC129895.5| Homo sapiens chromosome 11, clone CTD-2634E19, complete sequence
          Length = 140077

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    aaaacaaaaggcaaagataa 64
             ||||||||||||||||||||
Sbjct: 38760 aaaacaaaaggcaaagataa 38741

>gb|AC124312.5| Homo sapiens chromosome 15, clone RP11-701H24, complete sequence
          Length = 181639

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 93    ttttcctttgagaaaaaagtgaga 116
             |||||||||||||||| |||||||
Sbjct: 76760 ttttcctttgagaaaacagtgaga 76783

>emb|AL662941.3|OSJN00147 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074B10,
              complete sequence
          Length = 165400

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    gaaaaaagtgagacacactt 123
              ||||||||||||||||||||
Sbjct: 118074 gaaaaaagtgagacacactt 118093

>emb|AJ277662.1|HSA277662 Homo sapiens partial TUB gene for tubby (mouse) homolog and LMO1 gene
             for LIM domain only 1 protein
          Length = 174986

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    aaaacaaaaggcaaagataa 64
             ||||||||||||||||||||
Sbjct: 92313 aaaacaaaaggcaaagataa 92332

>gb|AC091013.7| Homo sapiens chromosome 11, clone RP11-379P15, complete sequence
          Length = 223741

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     aaaacaaaaggcaaagataa 64
              ||||||||||||||||||||
Sbjct: 206847 aaaacaaaaggcaaagataa 206828

>gb|AF521602.1| Carassius auratus alpha-globin gene, partial cds
          Length = 953

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 aaaaagtgagacacacttct 125
           ||||||||||||||||||||
Sbjct: 840 aaaaagtgagacacacttct 859

>gb|AC009696.10| Homo sapiens chromosome 15, clone RP11-131I21, complete sequence
          Length = 158838

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 93    ttttcctttgagaaaaaagtgaga 116
             |||||||||||||||| |||||||
Sbjct: 69679 ttttcctttgagaaaacagtgaga 69702

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 104     gaaaaaagtgagacacactt 123
               ||||||||||||||||||||
Sbjct: 3213635 gaaaaaagtgagacacactt 3213654

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 38       tacttgaaaaacaaaaggca 57
                ||||||||||||||||||||
Sbjct: 26750741 tacttgaaaaacaaaaggca 26750760

>gb|AC024595.5| Homo sapiens BAC clone RP11-84N19 from 4, complete sequence
          Length = 166394

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tgtacttgaaaaacaaaagg 55
             ||||||||||||||||||||
Sbjct: 85322 tgtacttgaaaaacaaaagg 85341

>dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0694A04
          Length = 141476

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tacttgaaaaacaaaaggca 57
             ||||||||||||||||||||
Sbjct: 97833 tacttgaaaaacaaaaggca 97852

>gb|AC009396.5|AC009396 Homo sapiens chromosome 14 clone RP11-232C2 map 14q31, complete
             sequence
          Length = 164427

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    ttgaaaaacaaaaggcaaag 60
             ||||||||||||||||||||
Sbjct: 28620 ttgaaaaacaaaaggcaaag 28639

>gb|AC115003.18| Mus musculus chromosome 6, clone RP24-179P9, complete sequence
          Length = 168290

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     cttgaaaaacaaaaggcaaa 59
              ||||||||||||||||||||
Sbjct: 101780 cttgaaaaacaaaaggcaaa 101761


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,966,195
Number of Sequences: 3902068
Number of extensions: 2966195
Number of successful extensions: 69167
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69023
Number of HSP's gapped (non-prelim): 144
length of query: 250
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 228
effective length of database: 17,147,199,772
effective search space: 3909561548016
effective search space used: 3909561548016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)