>ref|XM_550285.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1652

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 242  cctggagtacaggtaaactcccgccagtgctgcaccagtccccagtgcattgacagg 298
            |||||| |||||| |||||||  ||| |||  ||||||| || ||||||||||||||
Sbjct: 1375 cctggaatacaggaaaactcctcccaatgcaacaccagttcctagtgcattgacagg 1319

>emb|AL663029.11| Mouse DNA sequence from clone RP23-355B12 on chromosome 11 Contains a
             novel gene, complete sequence
          Length = 170968

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   aaaacattttcatcaactctt 223
             |||||||||||||||||||||
Sbjct: 30386 aaaacattttcatcaactctt 30406

>gb|AC008791.5| Homo sapiens chromosome 5 clone CITB-H1_2040J22, complete sequence
          Length = 128182

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    caaatcttcaagaccaaaagt 57
             |||||||||||||||||||||
Sbjct: 10139 caaatcttcaagaccaaaagt 10119

>gb|AC016614.6|AC016614 Homo sapiens chromosome 5 clone CTD-2217F15, complete sequence
          Length = 109314

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    caaatcttcaagaccaaaagt 57
             |||||||||||||||||||||
Sbjct: 11906 caaatcttcaagaccaaaagt 11886

>dbj|AK060343.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-E01, full
            insert sequence
          Length = 1652

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 242  cctggagtacaggtaaactcccgccagtgctgcaccagtccccagtgcattgacagg 298
            |||||| |||||| |||||||  ||| |||  ||||||| || ||||||||||||||
Sbjct: 1375 cctggaatacaggaaaactcctcccaatgcaacaccagttcctagtgcattgacagg 1319

>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold
          Length = 1623484

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    agggaaaaaacattttcatc 216
              ||||||||||||||||||||
Sbjct: 752482 agggaaaaaacattttcatc 752501

>gb|AC087729.2| Pan troglodytes clone RP43-143F17, complete sequence
          Length = 208928

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   agggaaaaaacattttcatc 216
             ||||||||||||||||||||
Sbjct: 53923 agggaaaaaacattttcatc 53942

>gb|AC145494.3| Gorilla gorilla gorilla clone CH255-100P16, complete sequence
          Length = 187132

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    agggaaaaaacattttcatc 216
              ||||||||||||||||||||
Sbjct: 186216 agggaaaaaacattttcatc 186235

>gb|AC002543.1| Homo sapiens BAC clone CTA-300C3 from 7, complete sequence
          Length = 150147

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   agggaaaaaacattttcatc 216
             ||||||||||||||||||||
Sbjct: 98552 agggaaaaaacattttcatc 98571

>gb|AC142297.1| Pan troglodytes BAC clone RP43-98C12 from 7, complete sequence
          Length = 137928

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   agggaaaaaacattttcatc 216
             ||||||||||||||||||||
Sbjct: 71412 agggaaaaaacattttcatc 71393

>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 20      ttcaggagaggatgttacaa 39
               ||||||||||||||||||||
Sbjct: 2159825 ttcaggagaggatgttacaa 2159806

>gb|AC157915.4| Mus musculus chromosome 19, clone RP24-294L7, complete sequence
          Length = 148975

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     aaaagtttggtctggccact 71
              ||||||||||||||||||||
Sbjct: 130370 aaaagtttggtctggccact 130389

>emb|AL162757.2|NMA6Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment
              6/7
          Length = 326301

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    gtatctggaacagggaaaaa 205
              ||||||||||||||||||||
Sbjct: 143138 gtatctggaacagggaaaaa 143119

>emb|AJ391256.1|NME391256 Neisseria meningitidis DNA for region 3 (prophage Pnm1 and gpxA) and
            flanking genes, strain Z2491
          Length = 44140

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  gtatctggaacagggaaaaa 205
            ||||||||||||||||||||
Sbjct: 4273 gtatctggaacagggaaaaa 4292

>gb|AC104704.1| Drosophila melanogaster 3L BAC RP98-8H6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 169705

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   cagggaaaaaacattttcat 215
             ||||||||||||||||||||
Sbjct: 54656 cagggaaaaaacattttcat 54675

>gb|AC055738.16| Homo sapiens 3 BAC RP11-234G11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 157711

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aggagatttgccattattca 23
             ||||||||||||||||||||
Sbjct: 21384 aggagatttgccattattca 21403

>gb|AC137157.3| Mus musculus BAC clone RP23-377M11 from chromosome 8, complete sequence
          Length = 187666

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    ctgtggcaagttctgtacaa 135
              ||||||||||||||||||||
Sbjct: 128713 ctgtggcaagttctgtacaa 128694

>gb|AC105061.16| Mus musculus chromosome 19, clone RP23-117I10, complete sequence
          Length = 210038

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    aaaagtttggtctggccact 71
             ||||||||||||||||||||
Sbjct: 38603 aaaagtttggtctggccact 38622

>ref|NM_060335.3| Caenorhabditis elegans Deubiquitylating with USP/UBP and OTU
           domains family member (duo-3) (duo-3) mRNA, complete cds
          Length = 3255

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 aaaaacattttcatcaactc 221
           ||||||||||||||||||||
Sbjct: 687 aaaaacattttcatcaactc 706

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 134      aacctactatctcaatacat 153
                ||||||||||||||||||||
Sbjct: 20791333 aacctactatctcaatacat 20791352

>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold
          Length = 1787293

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    agggaaaaaacattttcatc 216
              ||||||||||||||||||||
Sbjct: 670521 agggaaaaaacattttcatc 670540

>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold
          Length = 1819346

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    agggaaaaaacattttcatc 216
              ||||||||||||||||||||
Sbjct: 639066 agggaaaaaacattttcatc 639085

>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0569E11
          Length = 157319

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   aacctactatctcaatacat 153
             ||||||||||||||||||||
Sbjct: 66362 aacctactatctcaatacat 66381

>gb|AE003527.3| Drosophila melanogaster chromosome 3L, section 58 of 83 of the complete
              sequence
          Length = 279904

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 196    cagggaaaaaacattttcat 215
              ||||||||||||||||||||
Sbjct: 172422 cagggaaaaaacattttcat 172441

>emb|AL121841.5|CNS01DSS Human chromosome 14 DNA sequence BAC R-850C20 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 207945

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      aggagatttgccattattca 23
              ||||||||||||||||||||
Sbjct: 201524 aggagatttgccattattca 201505

>emb|AL049831.2|CNS00008 Human chromosome 14 DNA sequence BAC R-330O19 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 218956

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    aggagatttgccattattca 23
            ||||||||||||||||||||
Sbjct: 7111 aggagatttgccattattca 7092

>gb|AC142410.4| Mus musculus BAC clone RP24-173I18 from 1, complete sequence
          Length = 145213

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     gagatttgccattattcagg 25
             ||||||||||||||||||||
Sbjct: 40529 gagatttgccattattcagg 40548

>emb|AL627123.13| Mouse DNA sequence from clone RP23-351I23 on chromosome 4, complete
             sequence
          Length = 185022

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   ttgagcctggagtacaggta 256
             ||||||||||||||||||||
Sbjct: 80052 ttgagcctggagtacaggta 80071


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,248,867
Number of Sequences: 3902068
Number of extensions: 3248867
Number of successful extensions: 60091
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60013
Number of HSP's gapped (non-prelim): 78
length of query: 322
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 300
effective length of database: 17,147,199,772
effective search space: 5144159931600
effective search space used: 5144159931600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)