>gb|AC101833.14| Mus musculus chromosome 1, clone RP24-496H15, complete sequence
          Length = 167684

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1     aatccaaccaacaagccgttgcaatt 26
             ||||| ||||||||||||||||||||
Sbjct: 89681 aatcctaccaacaagccgttgcaatt 89656

>emb|Z49556.1|SCYJR056C S.cerevisiae chromosome X reading frame ORF YJR056c
          Length = 4795

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 99   tgagcgtgagcgtgatcgtga 119
            |||||||||||||||||||||
Sbjct: 2631 tgagcgtgagcgtgatcgtga 2611

>gb|L47993.1|YSCORFSAA Saccharomyces cerevisiae ORF genes, complete cds
          Length = 61989

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 99   tgagcgtgagcgtgatcgtga 119
            |||||||||||||||||||||
Sbjct: 6149 tgagcgtgagcgtgatcgtga 6129

>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA)
          Length = 1174

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 52   cacatgaagaacggaacaagatgaggcatata 83
            |||||||||||| |||| ||||||| ||||||
Sbjct: 1160 cacatgaagaacagaacgagatgagacatata 1129

>gb|AC160337.2| Mus musculus BAC clone RP23-193N1 from chromosome 9, complete sequence
          Length = 204712

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     taccaatcacatgaagaacg 64
              ||||||||||||||||||||
Sbjct: 103328 taccaatcacatgaagaacg 103309

>ref|XM_654058.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1546.2), mRNA
          Length = 4818

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 99  tgagcgtgagcgtgatcgtgaca 121
           ||||||||||||||| |||||||
Sbjct: 432 tgagcgtgagcgtgagcgtgaca 454

>gb|AC078937.1| Homo sapiens BAC clone GS1-113G16 from 7, complete sequence
          Length = 62035

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    atgaggcatatactattac 90
             |||||||||||||||||||
Sbjct: 53605 atgaggcatatactattac 53587

>ref|XM_446163.1| Candida glabrata CBS138, CAGL0F04411g partial mRNA
          Length = 639

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 119 acaaagagcaacagaagaa 137
           |||||||||||||||||||
Sbjct: 74  acaaagagcaacagaagaa 92

>emb|CR847506.8| Zebrafish DNA sequence from clone CH211-225N13 in linkage group 11,
             complete sequence
          Length = 199426

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 97    attgagcgtgagcgtgatcgtga 119
             ||||||||||||||||| |||||
Sbjct: 99945 attgagcgtgagcgtgagcgtga 99923

>emb|BX927353.7| Zebrafish DNA sequence from clone CH211-83F14 in linkage group 2,
            complete sequence
          Length = 94558

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 97   attgagcgtgagcgtgatcgtga 119
            ||||||||||||||||| |||||
Sbjct: 7198 attgagcgtgagcgtgagcgtga 7220

>ref|XM_533458.2| PREDICTED: Canis familiaris RNA binding motif protein 16 (KIAA1116),
            mRNA
          Length = 4690

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 98   ttgagcgtgagcgtgatcg 116
            |||||||||||||||||||
Sbjct: 1324 ttgagcgtgagcgtgatcg 1306

>emb|CR383660.9| Zebrafish DNA sequence from clone DKEY-1H22 in linkage group 14,
             complete sequence
          Length = 139631

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 97    attgagcgtgagcgtgatcgtga 119
             ||||||||||||||||| |||||
Sbjct: 40789 attgagcgtgagcgtgagcgtga 40811

>gb|AC165175.2| Zea mays clone ZMMBBb-136N21, complete sequence
          Length = 129274

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 70    agatgaggcatatactatt 88
             |||||||||||||||||||
Sbjct: 25142 agatgaggcatatactatt 25160

>gb|AE008889.1| Salmonella typhimurium LT2, section 193 of 220 of the complete genome
          Length = 20504

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 113   atcgtgacaaagagcaacagaag 135
             |||||||||| ||||||||||||
Sbjct: 14241 atcgtgacaatgagcaacagaag 14263

>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence
          Length = 927101

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 119    acaaagagcaacagaagaa 137
              |||||||||||||||||||
Sbjct: 441787 acaaagagcaacagaagaa 441769

>emb|AL929301.6| Zebrafish DNA sequence from clone BUSM1-SL7 Contains two genes for
             novel serine proteases, a novel serine protease
             pseudogene, three genes similar to vertebrate PIM1 (pim-1
             oncogene), a putative novel gene and a CpG island,
             complete sequence
          Length = 64032

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 97    attgagcgtgagcgtgatcgtga 119
             ||||||||||||||||| |||||
Sbjct: 39745 attgagcgtgagcgtgagcgtga 39723

>emb|AL627279.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 15/20
          Length = 264050

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 113    atcgtgacaaagagcaacagaag 135
              |||||||||| ||||||||||||
Sbjct: 212195 atcgtgacaatgagcaacagaag 212173

>emb|AL691431.20| Mouse DNA sequence from clone RP23-257P7 on chromosome 4 Contains the 5'
              end of a novel gene (2810031P15Rik), a ribosomal protein
              L10 (Rpl10) pseudogene, a ribosomal protein S6 (Rps6)
              pseudogene and two CpG islands, complete sequence
          Length = 199847

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 55     atgaagaacggaacaagat 73
              |||||||||||||||||||
Sbjct: 165857 atgaagaacggaacaagat 165839

>emb|BX548054.19| Zebrafish DNA sequence from clone CH211-237N4 in linkage group 14,
             complete sequence
          Length = 128658

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 97    attgagcgtgagcgtgatcgtga 119
             ||||||||||||||||| |||||
Sbjct: 77130 attgagcgtgagcgtgagcgtga 77108

>emb|BX324115.8| Zebrafish DNA sequence from clone DKEYP-70E6, complete sequence
          Length = 202547

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 49     aatcacatgaagaacggaacaag 71
              |||||||| ||||||||||||||
Sbjct: 130001 aatcacataaagaacggaacaag 129979

>gb|AC097498.3| Homo sapiens BAC clone RP11-326N15 from 4, complete sequence
          Length = 144511

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    ttgcaaagtggaacagaga 43
             |||||||||||||||||||
Sbjct: 71819 ttgcaaagtggaacagaga 71837

>emb|BX255965.12| Zebrafish DNA sequence from clone CH211-270C19, complete sequence
          Length = 148298

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 97   attgagcgtgagcgtgatcgtga 119
            ||||||||||||||||| |||||
Sbjct: 5736 attgagcgtgagcgtgagcgtga 5714

>emb|BX324225.7| Zebrafish DNA sequence from clone DKEY-180I22 in linkage group 21,
              complete sequence
          Length = 207125

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 97     attgagcgtgagcgtgatcgtga 119
              ||||||||||||||||| |||||
Sbjct: 177398 attgagcgtgagcgtgagcgtga 177376

>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 113     atcgtgacaaagagcaacagaag 135
               |||||||||| ||||||||||||
Sbjct: 4047271 atcgtgacaatgagcaacagaag 4047293

>emb|BX005128.4| Zebrafish DNA sequence from clone CH211-129H14 in linkage group 17,
             complete sequence
          Length = 152345

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 97    attgagcgtgagcgtgatcgtga 119
             ||||||||||||||||| |||||
Sbjct: 12591 attgagcgtgagcgtgagcgtga 12613

>dbj|BS000111.1| Pan troglodytes chromosome 22 clone:PTB-093K04, map 22, complete
            sequences
          Length = 184428

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 79   atatactattacacacgaa 97
            |||||||||||||||||||
Sbjct: 4072 atatactattacacacgaa 4090

>dbj|BS000110.1| Pan troglodytes chromosome 22 clone:PTB-090P24, map 22, complete
              sequences
          Length = 157686

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 79     atatactattacacacgaa 97
              |||||||||||||||||||
Sbjct: 132084 atatactattacacacgaa 132102

>emb|BX571881.6| Zebrafish DNA sequence from clone DKEY-251M4 in linkage group 18,
             complete sequence
          Length = 100776

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 97    attgagcgtgagcgtgatcgtga 119
             ||||||||||||||||| |||||
Sbjct: 77232 attgagcgtgagcgtgagcgtga 77254

>emb|AL845420.7| Zebrafish DNA sequence from clone CH211-203K16 in linkage group 20,
             complete sequence
          Length = 145933

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 49    aatcacatgaagaacggaacaag 71
             |||||||| ||||||||||||||
Sbjct: 14155 aatcacataaagaacggaacaag 14177

>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 113     atcgtgacaaagagcaacagaag 135
               |||||||||| ||||||||||||
Sbjct: 3661858 atcgtgacaatgagcaacagaag 3661836

>dbj|AP001710.1| Homo sapiens genomic DNA, chromosome 21q, section 54/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 79     atatactattacacacgaa 97
              |||||||||||||||||||
Sbjct: 167725 atatactattacacacgaa 167743

>dbj|AP000247.2| Homo sapiens genomic DNA, chromosome 21q, clone:RP5-871G18, complete
             sequence
          Length = 113919

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 79    atatactattacacacgaa 97
             |||||||||||||||||||
Sbjct: 22271 atatactattacacacgaa 22289

>dbj|AP000208.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             f43D11-119B8, segment 6/12, complete sequence
          Length = 100000

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 79    atatactattacacacgaa 97
             |||||||||||||||||||
Sbjct: 41713 atatactattacacacgaa 41731


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,022,080
Number of Sequences: 3902068
Number of extensions: 1022080
Number of successful extensions: 78139
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78044
Number of HSP's gapped (non-prelim): 85
length of query: 138
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 117
effective length of database: 17,151,101,840
effective search space: 2006678915280
effective search space used: 2006678915280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)