| Clone Name | rbast21c09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | gb|DQ409175.1| Bambusa ventricosa cytochrome P450 mRNA, complete... | 76 | 7e-11 | 2 | gb|AC099589.12| Mus musculus chromosome 1, clone RP23-337A19, co... | 40 | 4.0 | 3 | gb|AC129190.3| Mus musculus BAC clone RP24-79D2 from chromosome ... | 40 | 4.0 |
|---|
>gb|DQ409175.1| Bambusa ventricosa cytochrome P450 mRNA, complete cds Length = 1913 Score = 75.8 bits (38), Expect = 7e-11 Identities = 50/54 (92%) Strand = Plus / Minus Query: 126 ggtagaggtgcagcggcaggcgtggcttggcgtgcagcaccagcggcttagcca 179 |||||||||||| ||||||||| |||| ||||||||||||||||||||| |||| Sbjct: 1741 ggtagaggtgcaccggcaggcgcggctgggcgtgcagcaccagcggcttggcca 1688 Score = 60.0 bits (30), Expect = 4e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 238 ccaggtgaagccatggaggagcctgccgaaaagcatgacggtcatggccgtgccgagc 295 |||||||||||| || |||||||||||||| ||||| ||| |||| ||||| |||||| Sbjct: 1629 ccaggtgaagccctgcaggagcctgccgaagagcatcacgctcatcgccgtcccgagc 1572
>gb|AC099589.12| Mus musculus chromosome 1, clone RP23-337A19, complete sequence Length = 264062 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 catggacatgagcagtagca 49 |||||||||||||||||||| Sbjct: 158347 catggacatgagcagtagca 158328
>gb|AC129190.3| Mus musculus BAC clone RP24-79D2 from chromosome 1, complete sequence Length = 236342 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 catggacatgagcagtagca 49 |||||||||||||||||||| Sbjct: 135086 catggacatgagcagtagca 135067 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,795,126 Number of Sequences: 3902068 Number of extensions: 1795126 Number of successful extensions: 33173 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 33169 Number of HSP's gapped (non-prelim): 4 length of query: 308 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 286 effective length of database: 17,147,199,772 effective search space: 4904099134792 effective search space used: 4904099134792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)