| Clone Name | rbast21a01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AE009162.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 188 of 256 of the complete sequence Length = 10134 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 ccatttcggtgagtttcacgc 206 ||||||||||||||||||||| Sbjct: 2099 ccatttcggtgagtttcacgc 2079
>gb|BC070490.1| Homo sapiens cDNA clone IMAGE:6138765, **** WARNING: chimeric clone **** Length = 1365 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 accgcctgcctccgtggatgg 315 ||||||||||||||||||||| Sbjct: 549 accgcctgcctccgtggatgg 569
>gb|AC010043.7| Drosophila melanogaster 3L BAC RP98-12K4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184657 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 ccatttcggtgagtttcacgc 206 ||||||||||||||||||||| Sbjct: 146150 ccatttcggtgagtttcacgc 146130
>gb|AC010107.7| Drosophila melanogaster 3L BAC RP98-2B1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181063 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccatttcggtgagtttcacgc 206 ||||||||||||||||||||| Sbjct: 148745 ccatttcggtgagtttcacgc 148765
>gb|DQ167756.1| Drosophila simulans putative Laminin B2 (LanB2) gene, exons 7 through 9 and partial cds Length = 2098 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 ccatttcggtgagtttcacgc 206 ||||||||||||||||||||| Sbjct: 1961 ccatttcggtgagtttcacgc 1941
>gb|DQ167754.1| Drosophila erecta putative Laminin B2 (LanB2) gene, exons 7 through 9 and partial cds Length = 2079 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 ccatttcggtgagtttcacgc 206 ||||||||||||||||||||| Sbjct: 1951 ccatttcggtgagtttcacgc 1931
>gb|AC110743.4| Homo sapiens chromosome 18, clone CTD-3153M21, complete sequence Length = 78507 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 accgcctgcctccgtggatgg 315 ||||||||||||||||||||| Sbjct: 45256 accgcctgcctccgtggatgg 45276
>ref|NM_079282.1| Drosophila melanogaster Laminin B2 CG3322-RA (LanB2), mRNA Length = 5757 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 ccatttcggtgagtttcacgc 206 ||||||||||||||||||||| Sbjct: 4760 ccatttcggtgagtttcacgc 4740
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 ccatttcggtgagtttcacgc 206 ||||||||||||||||||||| Sbjct: 2082991 ccatttcggtgagtttcacgc 2082971
>gb|BT021394.1| Drosophila melanogaster LD15803 full insert cDNA Length = 5755 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 ccatttcggtgagtttcacgc 206 ||||||||||||||||||||| Sbjct: 4740 ccatttcggtgagtttcacgc 4720
>gb|AE003551.3| Drosophila melanogaster chromosome 3L, section 34 of 83 of the complete sequence Length = 285860 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 ccatttcggtgagtttcacgc 206 ||||||||||||||||||||| Sbjct: 145949 ccatttcggtgagtttcacgc 145929
>gb|M58417.1|DROLAMB2A Drosophila melanogaster laminin B2 gene, complete cds Length = 11464 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 ccatttcggtgagtttcacgc 206 ||||||||||||||||||||| Sbjct: 10100 ccatttcggtgagtttcacgc 10080
>gb|M25063.1|DROLAMB2 Drosophila mRNA for laminin B2 chain Length = 5737 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 ccatttcggtgagtttcacgc 206 ||||||||||||||||||||| Sbjct: 4740 ccatttcggtgagtttcacgc 4720
>ref|NM_115269.3| Arabidopsis thaliana kinase AT3G54090 mRNA, complete cds Length = 1588 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 gatggaacataaacttattctttc 405 |||||||||||||||| ||||||| Sbjct: 1427 gatggaacataaacttgttctttc 1404
>gb|AC121603.4| Mus musculus BAC clone RP23-310D9 from 18, complete sequence Length = 195555 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tgccatgactgctgcctgca 117 |||||||||||||||||||| Sbjct: 175042 tgccatgactgctgcctgca 175023
>emb|AL132957.1|ATF24B22 Arabidopsis thaliana DNA chromosome 3, BAC clone F24B22 Length = 100285 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 gatggaacataaacttattctttc 405 |||||||||||||||| ||||||| Sbjct: 14927 gatggaacataaacttgttctttc 14904
>gb|AY128817.1| Arabidopsis thaliana fructokinase-like protein (At3g54090) mRNA, complete cds Length = 1474 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 gatggaacataaacttattctttc 405 |||||||||||||||| ||||||| Sbjct: 1406 gatggaacataaacttgttctttc 1383
>gb|AY093161.1| Arabidopsis thaliana fructokinase-like protein (At3g54090) mRNA, complete cds Length = 1534 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 gatggaacataaacttattctttc 405 |||||||||||||||| ||||||| Sbjct: 1427 gatggaacataaacttgttctttc 1404
>gb|AC008105.32| Homo sapiens chromosome 17, clone CTD-2020K17, complete sequence Length = 96875 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 agtcttcctctcatgccagg 151 |||||||||||||||||||| Sbjct: 88719 agtcttcctctcatgccagg 88738
>emb|BX822350.1|CNS0A5ZK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB30ZA06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1503 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 gatggaacataaacttattctttc 405 |||||||||||||||| ||||||| Sbjct: 1421 gatggaacataaacttgttctttc 1398
>emb|BX824609.1|CNS0A5QO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH5ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1481 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 gatggaacataaacttattctttc 405 |||||||||||||||| ||||||| Sbjct: 1371 gatggaacataaacttgttctttc 1348
>emb|BX824482.1|CNS0A5K3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH50ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 308 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 gatggaacataaacttattctttc 405 |||||||||||||||| ||||||| Sbjct: 184 gatggaacataaacttgttctttc 161 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,000,884 Number of Sequences: 3902068 Number of extensions: 3000884 Number of successful extensions: 49100 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49062 Number of HSP's gapped (non-prelim): 38 length of query: 451 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 429 effective length of database: 17,147,199,772 effective search space: 7356148702188 effective search space used: 7356148702188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)